Haliotis cracherodii (black abalone): 139450086
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Entry
139450086 CDS
T10814
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B-like
KO
K11267
sister chromatid cohesion protein PDS5
Organism
hcra Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcra03036
]
139450086
03400 DNA repair and recombination proteins [BR:
hcra03400
]
139450086
Chromosome and associated proteins [BR:
hcra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
139450086
DNA repair and recombination proteins [BR:
hcra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
139450086
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
INTS7_N
Motif
Other DBs
NCBI-GeneID:
139450086
NCBI-ProteinID:
XP_071087825
LinkDB
All DBs
Position
Unknown
AA seq
1482 aa
AA seq
DB search
MAKALNKTVKVCYPPGCKEVSEEIPKDELIRRLKLLARAFQDMGQDDNDQYAGLALMLAT
DFYLDHQNKDVRLLVACCIADVFRIFAPEAPYKDQDHLKEIFLFLIKQLRGLEDPEAPSF
KRYFYLLENLAWVKSFNICIELDDNQEIFCSLFKLMFSTVSDKHSSKVKNFMLDMMTPLI
AEADTVSQELLDVVLINIVEPQKSQNKHAYALAKDLLRRTSNAIEPYIQAFFNNTLMLGK
TSESEVSDHLYDLIYELNQVSPNVLLAVLPQLEFKLKSNEEHERKHVTKLLAKMFSEPGS
DLANQNKPLWYCFLGRFNDISTSVRIICCSFAQYFVLNHPELTKDILEQLKVRQHDPEET
VRIEVINCVMNVAKKDFDFVNEEMMTFIKERTLDKKFKIRREGLLGLGTMYKQVMTKETI
NPQHEKKVAWIKNKVFHAYYQNSNDDRLLVERIFNINLVPYMLPADVRMLRLLRLYCTLD
DHAVKAFNELLKHRSSVRVQVMQLLEAIELHGQPNAPPLFPRLAGLVRTLPEQQKPQEYL
KKFSQKLRDDKRMRHLLKVVVHPECSCKKAEEAVKEILKKIGCNPGQANYMYNLVKSLLE
RIAPVMIDAVAMEKLVNHVNETLTGLGENMEGIHNAGEKSVKLLLALSYAYPHHFRTAEV
FEKFLTFLNHDDDTVSDITQQIITNTGSNLQRMHPDIYSSLVPVLVRTAKMGNPKQTKHA
IRCISVVCKNKEPILAQVFEYVKRNLDPESANYITSIVALGHIAKLCPEEFATDMKSIVS
RIIVKDLLMQDRTDSVEATESWYSDHLVAEETQAKVQAMKLLVRWLQGLKSNQNNSGTST
LRLLYTVIIHEGDLMEHGRINKPELARLRLQAGCCMLKLAEETCYSDIIPCEQFQALALL
INDSCYHVRVKFAIKLHKGLLNMRLPLEFMSIFSLAANDPLKERQRQLKQFLNVNIQKRR
DYLKQNPAARNRMFAILPDYILPYTVHLLAHDPDFKTFQQTDALKNIKDCLWFVMDPLTG
RSEDYNYAFFRRMIENMKQTKDAQCPDDDDMNKKLYAVCDVALGLMNTKTTNITLKDNNT
EPVLPAKLFTKPDKSYTNTKSYLPKDFNFDGPRRKGVQALIDGPPRSGYGSKPDPTTTEI
IVESPGPVVNPHPKVPRTKRGPLRKKKEEEPGKENDGDSNESDSLEKNCGDSDKSSSPEV
AKKSTRSSSQDKNSDESQSSSEHTSRGGRGVKAGTKQTRLEDFKVKLSPAKRGKDSVKKS
LVNGTNKRTAKAGEGDGSESAKHSRKRHGSSEEDVPSKRTRGATSEDVESQRNTRAADTK
KSKGTKDKNGGGKSYNCDVSETDSVSKEGSVSTPGASPRKRRASSPPPQPSAQVKRSRLT
RSNIKTTDSDQEIVPSPTPSAEPQKTLQTKKQETLVKKTNVRNVRRAKAMSNGTSDGEDT
AETDSPSSPPRRVAALTRAVQSVGAGEDAEGGVRRKTRSRKK
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcgctgaacaaaactgtgaaggtgtgttacccacctggctgcaaggaagtc
agtgaggaaatacccaaggatgaacttatcagaagactcaagctactggcccgagccttc
caggacatgggtcaggatgacaatgaccagtatgctggactggccctcatgctggccaca
gatttctacctggaccaccagaacaaagacgtccgacttctggtggcatgctgcattgct
gacgtcttcagaatatttgccccagaagcaccatacaaagatcaagatcatttgaaggag
atcttcctgttcctgatcaagcagctgcgagggttggaagatcctgaggctccttctttc
aagagatatttctatttattggaaaacctggcctgggtgaagtccttcaacatatgcatt
gagctagacgacaaccaggagatattctgctccctcttcaaactcatgttctccacagtc
agtgacaagcattccagcaaggtgaagaacttcatgttggacatgatgacacccctaata
gctgaggctgacacagtgtcacaagaactgttggatgttgtactaatcaacattgtagag
cctcagaagtcgcagaacaaacatgcctatgccttggcgaaggacctgttgaggagaacc
agcaacgccattgaaccatacattcaggcatttttcaacaacactttgatgctggggaag
acctctgagagtgaggtgtcagaccacctgtatgatctcatctatgagttaaatcaggtg
tctcccaacgtactcctggctgtcctcccacagctggagtttaaactcaagagtaatgaa
gagcatgagcgaaaacatgtgacgaaactgctggcaaagatgttctcagaacctggatct
gacctggcgaatcagaacaaaccactgtggtactgctttctaggcagattcaatgacatc
agtacatctgtacggatcatctgctgttcgtttgcacagtacttcgtgctgaaccaccca
gaactcactaaagatatccttgagcaactgaaggtgcggcagcacgaccctgaggagact
gtaaggattgaagtcatcaactgtgtcatgaatgtcgcaaagaaggacttcgactttgtc
aatgaagaaatgatgaccttcatcaaagagagaaccttggacaaaaagttcaagatccgg
cgtgaaggtctgcttggtctgggcaccatgtacaagcaggtgatgaccaaggagaccatc
aacccccaacatgagaagaaggtcgcgtggatcaagaacaaggtgttccacgcatactac
cagaacagcaatgatgacaggttacttgttgagcggatcttcaacatcaacctggtgccg
tacatgctgcctgcggatgttcggatgcttcgacttctgcgcctctactgcaccctggat
gaccatgccgtcaaagcatttaatgaattattgaagcacagaagctcggtgcgagttcaa
gtgatgcagctactggaggctatagaattacatggacaaccaaatgccccgccactcttc
cctagactggcaggtcttgttcggacgctacctgagcaacagaagccccaggaatacctg
aagaagttcagccagaagctgcgagatgacaagcggatgcggcacctactcaaggtggtg
gtgcaccctgaatgctcctgtaagaaggcagaggaggctgtgaaagagatattgaagaaa
attgggtgtaatcctggacaggccaactacatgtacaacctagtcaagtcactactggaa
cgtatcgccccggtaatgattgacgctgttgccatggagaagcttgtgaatcatgtaaat
gagacgttgacaggacttggtgagaacatggagggcatccataatgctggagagaagtcc
gtcaagttgctgctggccctgtcatatgcatatccacatcattttcggacggcggaagtg
tttgaaaagttcctcactttcttgaatcatgatgacgacacagtcagtgatattacacaa
cagatcatcaccaacacaggctcgaacctgcagaggatgcacccagacatatactcgagt
ctggtgcccgtgctggtccgtacagccaagatgggcaacccaaagcagacgaagcatgcc
atcagatgcatcagcgtagtgtgcaagaacaaagagcctattctggcacaggtgttcgag
tatgtgaagaggaacctagatcctgagtcagccaactacatcacatcaatagtagcattg
ggacatatagccaagttgtgtcctgaagagttcgccacagacatgaaatccattgtatcc
agaatcatagtgaaagatctcctcatgcaggacaggacagacagtgtggaggcaacagaa
agctggtatagtgaccacctggtggcagaagaaacgcaagcaaaggtgcaagcgatgaag
ctgctggtgcgatggctgcaggggctgaagagcaaccaaaacaactcaggcacctcgaca
ctccggctcctctacacagtcatcatacatgagggggatctcatggaacatggcaggatc
aataagcccgagctggcacgactgcggctccaggccggctgctgcatgctgaagctggcc
gaggagacatgctactccgacatcatcccttgtgaacagttccaggccctggcactcctc
atcaatgatagctgctatcatgtccgagtcaagtttgccatcaagttgcacaagggcctc
ctgaacatgcgcctgccacttgaattcatgagtatcttctccctggcagccaatgatcca
ctgaaagagaggcagcgtcagctcaaacagttccttaacgtcaacattcagaagaggcgc
gactacctcaaacagaatcccgcagcgagaaaccgaatgtttgccatcctgccagactac
attctgccctacactgtccatctcctggctcacgaccctgacttcaagaccttccagcag
acagatgcactcaagaacatcaaagactgcctgtggtttgtgatggaccctctaactggc
cgcagtgaagactacaactatgccttcttccggcggatgatagagaacatgaaacagacc
aaagatgcccagtgccccgatgatgatgatatgaacaaaaagttgtatgctgtatgtgat
gtggccctggggctaatgaacaccaagaccaccaacatcactctgaaggacaacaacaca
gagcccgtcctgccggccaaactcttcaccaagcctgacaagtcgtacaccaacacaaaa
agttaccttccaaaagacttcaactttgatgggccaaggaggaagggagtgcaggcactg
atcgatggtccgccccgctcaggctatggcagcaagcccgatcccaccaccacagagatc
atcgtggagagtcccgggccagtcgttaacccacatccaaaggttcctcgcaccaagagg
ggacctctcagaaaaaagaaagaggaggaaccagggaaggagaatgacggtgattccaat
gagtccgattccctggagaagaactgtggagactccgacaagtcctccagtccagaagtg
gccaagaaaagtacccgaagctcttctcaagataagaactctgatgaatctcagtcatcc
agtgaacacacaagcaggggaggtaggggtgtaaaagcagggactaaacaaacaagactc
gaagactttaaagtgaaactttcccctgctaagaggggcaaggattctgtgaaaaaatct
cttgtgaatggtacaaataaaaggactgcgaaggcaggtgagggggacggtagtgaaagt
gcaaaacattctcggaaacgtcatgggagttcagaagaggatgtgccatcaaaacgaaca
cgaggcgcaacctcagaggacgttgaatcacagagaaatactagggcagcagatacaaaa
aaatcaaaagggacaaaagataagaatggtggtgggaagagctataactgtgacgtcagt
gaaactgacagtgtgtccaaggagggctcagtgtccacgccaggagcatcaccacggaaa
cgcagagcctcgtccccacctcctcagccttctgctcaggttaaaaggtcccgtctgacg
cgcagcaacataaagaccactgacagtgaccaggagatcgttccctcacccacacccagt
gcagaaccacagaagaccctgcaaaccaaaaaacaagaaactctggtgaagaagaccaat
gtgaggaatgtgcggcgagcaaaggcgatgtccaatggcacatctgatggcgaggacaca
gcagagacggactccccgtcgtcgcctccgcgaagggttgcagcactcaccagggccgtc
cagtcagtcggggcaggagaggatgctgaaggaggggttcgaagaaaaacacgatccagg
aagaaatag
DBGET
integrated database retrieval system
