Haliotis cracherodii (black abalone): 139450333
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Entry
139450333 CDS
T10814
Name
(RefSeq) protocadherin-11 X-linked-like
KO
K16498
protocadherin delta 1
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03273
Virion - Lassa virus and SFTS virus
hcra04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
139450333
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
139450333
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcra01009
]
139450333
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcra04515
]
139450333
Protein phosphatases and associated proteins [BR:
hcra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139450333
Cell adhesion molecules [BR:
hcra04515
]
Cadherins
Protocadherins
139450333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Ig_Cad99C_N
Cadherin_2
Cadherin_FAT4_N
Cadherin_pro
Chordopox_L2
Motif
Other DBs
NCBI-GeneID:
139450333
NCBI-ProteinID:
XP_071088113
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MPLPSVLILLVTLTLLPDPAHLVQVISFDLVEEQGVNVAVGSVTDSLELEEEKTDELLTS
LRYSLLPQGYPDSSLFRITDGKGEIFAVEKIDREEICGFAKSCNLNLELVVQSSTFQLFK
KVRVNIVVVDVNDNAPTFPSKSVSLDISESVSVNSSFAVEGAIDPDTGRNALQTYDILRA
DGVFDLDIKKNLDGGSVVNLIVRETLDRERKDFYRIYLMAKDGGIPRKSSLLMVNITITD
INDNAPVFPFAQYNVTVEEVVSVGHVVLSITASDADANVNWRPFYRLSPLQSGEARKYFN
MNPGTGEITVISPLSEIQGRKLKFVVECVDGDTPPLVGQSEVEIFVQDTENTEPVINLNL
LNGGVVSESYRLGTVVAHLAASDLDSGRNGYVKCSIDSSTFEIQNLDVNEYKVTLKRFVD
RETESEVGGTITCQDEAEPPLNTTTSFVMTIFDENDNIPTFTQEVYEVTVEENNKPDLIL
LQVTAFDPDFGDNGKIHYSITEGRDSGVKISQQGEITALLSFDREDKAQIVLTIMARDNG
TPCHNSTATVLINLQDVNDVAPTFSQSIYSFETPENLPRGTQVGKVSVYDLDDGRNGELF
LSIELLFEDIESFPISVTQTGELKTTRPLDREMESHFEFVVLATDKGREPITSTAKIFVD
VDDRNDNAPVLFFPSEMNDTIFVTYNTDPGTGLVTIDAIDKDAGDNGKLEYILVSIERVE
IRLEDVDFDDQTKDELFSLDSETGTITLTRYPTLDDLGVYSLDIMVRDQGMVSLSTNTTL
IVEVVASNETIVALLTGTAESNNNTTIVTALGCLTGLVIVVVIVIIFTIRMIDRERTLKR
ERQLHVKVEPRDVDVKYDGEMLDSGHKLKRSLSSPRLSSHVSHGWKFLSAWHLGSGDSSK
LTAAHNWARNKTRKVSADSNDSGTSGSDSGKGGSDDDNHSNETSSLQGHSTDRKLLATDD
CPPEPEYSVVIRPNKEKYDCMQSRRLLPKLDEISLPGDELYADYCSLDTIKEEPESPYKE
IGFHFEPPVPKLRQPKKLPRNVLKDNDGQGLIRAKSRSDLRMSGDSSDEETLKRASVDGV
NLKCGDSVIFDLDLQKVDDIFV
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgccccttccctctgtgctcatcctcctagtgaccttgaccttactacctgaccctgcc
cacctagttcaggtcatctcatttgaccttgtagaggagcaaggggtcaacgttgcggta
ggatctgtaacggactctctggaactggaagaagagaagacggatgagctcttgacctct
ctccggtacagcttactgccccaaggttaccccgacagttccctgttccggatcacggat
gggaagggggagatcttcgccgtggaaaaaatcgacagggaagagatatgtggctttgca
aagtcatgtaacctcaacctggagttggtggtgcagtcgtcaacgttccagctgttcaag
aaggttcgggtcaatattgtagtcgttgacgtcaacgacaacgctcctacgttcccgtcg
aagtctgtatctctggacatctcggaatccgtgtctgttaactcgtcgtttgctgttgaa
ggagcgattgatccggacactggacgcaatgcccttcagacatatgatattcttagagcc
gatggggtgtttgaccttgacataaagaagaatctcgatggcggcagcgttgtcaatctg
atcgttagagaaaccttagatagagagcggaaggatttctatcgaatatatctcatggca
aaagatggtggaattccaaggaagtctagtctactgatggttaatataacaatcacagat
attaatgacaatgcaccagtattcccatttgcacagtataacgtcacagtcgaggaagtg
gtttctgttggccacgttgtactgagcattaccgcatctgacgctgacgctaatgtcaat
tggagaccattttacagactcagccctcttcagtcaggtgaggcaagaaagtatttcaac
atgaatccaggaacaggggagataaccgtcatatccccgctgtcagagatccaagggaga
aaactcaagttcgtagttgaatgtgtcgacggcgacactccaccattggttggccaaagc
gaggtagaaatattcgttcaagacacagaaaatacagaacccgtgataaacctcaatctc
ctgaacggcggagtggtatcagagtcctacaggcttggcacagtcgtagctcacctggcc
gcgagtgaccttgactcgggaagaaacggctacgttaaatgttccattgacagctcgacg
tttgagatccagaatcttgacgtcaatgaatacaaggtcacgttgaagcgcttcgtggat
agagagacggagagcgaagtcggcggaaccatcacgtgtcaggatgaagctgaacctccc
ctgaacaccactacatcttttgtaatgacaatatttgatgagaatgataacatacccacc
ttcacacaagaagtgtatgaggttactgtagaagaaaataacaaacccgaccttatactg
ctgcaagtaacggcattcgacccagactttggtgataatgggaaaatccattactcaatc
acagagggtcgggactccggcgtgaagatttctcaacaaggggagataactgctctactt
tcattcgatcgagaagataaggcacagattgtattgactatcatggctcgagataacggc
actccatgtcataattctacagcaactgtgttgattaatcttcaagatgtaaatgacgtg
gctccgacgttcagccagagtatatactcatttgaaactcctgaaaacctcccccgggga
actcaagtcggtaaagtgtcggtttatgaccttgatgatggacgaaacggagaactgttt
ttaagtattgagctattatttgaggatattgaaagtttcccgatctcagtcacccaaaca
ggggaattgaagacaactcggcccttggacagggaaatggaaagccattttgaatttgtg
gtactcgcaacagataaagggagagaacccatcacaagcacggctaagatctttgttgat
gttgatgacaggaacgataatgctcctgttcttttcttcccatctgaaatgaacgacacc
attttcgtaacttacaacactgatcctggtactggattggtgacaattgatgctatcgac
aaggatgcgggtgataacggcaagcttgagtacatactggtatctattgagagggtcgaa
atcaggcttgaagacgttgattttgacgatcaaacgaaggacgaacttttcagcctcgat
tccgaaacaggaacgataactctaaccagatatcctaccctagatgatttaggtgtttat
tccctggatatcatggttcgagaccaagggatggtgtcgttatcgacgaacacaacgttg
atcgtagaagtggttgctagtaatgagacgatagtagctctgttaaccggcactgcagaa
agcaacaacaacacgacgatagtaacggcattgggatgtctgacaggcctcgtcatcgtt
gtagtaatcgtgataatctttaccatcaggatgattgacagggagagaactctgaaacgt
gaacgtcagctgcacgtgaaggtggaaccgcgcgacgtcgacgtgaagtacgatggcgag
atgcttgacagtgggcacaagctgaaacgttcgctgtcgtcgccgaggctgtcaagtcac
gtgtctcacggctggaagttcctgtcagcgtggcatctcgggtccggtgacagcagcaag
ttgacggcggctcacaactgggcgaggaataagacaaggaaggtatccgccgacagcaac
gacagtggtaccagcggaagcgacagtggcaaaggcggaagtgacgacgataaccatagc
aacgagacttcgtccttgcaaggccattcaacagaccggaagctcttagcaactgacgac
tgcccaccggaacctgaatacagtgtagtcattcgcccaaataaggagaaatacgactgc
atgcagagcagacgactcttgccgaaactcgacgagatttctctgcccggagacgagctg
tatgctgattactgcagcttggatacgatcaaggaagaaccggaaagcccctacaaagag
atcggttttcattttgagccccctgttccaaaactgcgacaaccgaaaaaacttccaagg
aacgtcttgaaggacaatgatggccaaggactcataagggctaaaagtcgtagcgatctg
cgcatgtctggtgatagttcggatgaagagactctgaagagggcaagcgtggatggagtc
aacttaaaatgtggcgattctgttatatttgatttagatctgcaaaaggttgacgatatc
ttcgtctaa
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integrated database retrieval system
