Haliotis cracherodii (black abalone): 139450430
Help
Entry
139450430 CDS
T10814
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139450430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139450430
03036 Chromosome and associated proteins [BR:
hcra03036
]
139450430
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139450430
Chromosome and associated proteins [BR:
hcra03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139450430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
139450430
NCBI-ProteinID:
XP_071088227
LinkDB
All DBs
Position
Unknown
AA seq
1870 aa
AA seq
DB search
MFGQKPMGFGAGFGGGTSSTFGSSTPFGQNNNSFGNKPAGAAGFGTPAFGSTTPATGGLF
GANNNTSTGGLFGQTNASTFGNQSTGFNFGNTPSTSSGGAGGLFGQTQTQSAGGLFSTPQ
STTSAFGAKTPGFGGFGTSTAPAGGLFGQQNQANTGGMLFGQAGAAGFANNANGTTVKFN
PPSGQDTMMKNGVSASINTRHQCITAMKEYDNKCLEELRLEDYQANRKGKQQGTGGAGGG
LFGSTPATSSTGFSFGQQPQQQQQQQQASTGFAGQNSFGTSTSTASTGLFGQTNPQASGG
MFGQNKPLFGGASTTTTASTSGFGFGNTNQAAGLFGQNQQNKPLFGTATTQSSLFGANTS
TAPATSFSFGNTGGFGTQAPSTGLFGSKPAGFGAATTSAPGFFGQGGNLFAKPTTTSSFG
FGGTNTGTAGFGGFGGFGSTANTGGAGLFGNKPGGFGAAAASTLGAGTNSFNFGQTGQTG
AGLFGANNMNKPSTFGFNFNSGQTTASTGFGGVGTGSGFSLGGNTSTLGTTTNPSASNNQ
LQQQLLALTSSPFGDSPLFWNLKQNSEKREEVLKPTNPAAQKAALSSSSQYKVSPRPTAK
IKPKSLHSLMNGSKSQLFEGLEDEDFSFGNDTFMPRRSVKKLTLKKVNGDSSNMSRASSQ
TDEQPDLQSFSQDTPRPKPITRTLQADLDRAAQSPDTEPILRTKSITEPTRHSPIKDATS
LDDTIAALTSKNKVLSGDSHSDMNKSHSEQDPNVSIEPQAQMEDFEPHPTGIILTRPGYY
TSPSLDSLVELMDENGDCFVDDFTIGRENYGSLFFPGSTNVSNLNLDEIVHFRRKEVIVY
PDDDQKPPLEDGLNKIAEVTLDCVWPSDKSTRSPIKDSSRLRTMGYQTKIEEITAKIGAK
FIDYRPETGSWVFQVKHFSKYGLVDDSDEEEVTESEKKKLKLAKEQQLQIQKLKIQTEAQ
MKGKEVKGQGDMEFQLQGLTGKPVSPPKEGYEAHYAQSEGMDDFDEDMPDITMEKFPRDM
EDSDDDMKGMTDTPSSHRLASSMGVSAHSMQVMKASFFGDDDYQDDFKGKLSGFTSGQTF
LKQQDKTMPSLFSPALKSKYVSPLRVTQSPVPQEMQKQPPGLFSQKIIAPEARRPPQNFG
HPPLAEHMLLTSGLSQKDTPRKIVGSRVKRDIPPVSDSLMYKKQKLIVDAGCLMGRSFRV
GWGPGWTLVHSGQPSNFEEKEAPRQTPFSLLPGIQGGKPVRAGSKAWTVTCEKMDVADYL
TGNDKTVISTHEEMLDVQLENSQRDTDGGCPLFVPSPGVDSLHQYAQLGEKLLEENSGHP
DESSVDHIRMVWNLCVALWGNLPEFRYSDTDEYAVSQARREAFSKWLSETAQPKIKEEVQ
ESKFKNQGHLIAILSYLSGRQITDACTLAQKSGDHRLALSLAQAVGSHVPRQMLARQLEE
WAELGANHFIDQVRLKIYSLLSGQLVWSSSTPVNTCDNMDWKRALALHLWYHCKPNASIS
EALSQYEDAFKSRTPFGKYSNSPLPPYLEDNDSYEEEEEAMDERDDHVVRDTCYHLLKLY
CQKGHRLERILNPTTSTANQLDYRLSWHLYQVLQSMSYHHVSPYHAACLHTSFAAQLEAL
HLWHWAVFALLHIEDALRRETAVRSVLERHVTLSKSPKYLHKEEFVRERLRVPHAWIHHA
KAIKARSENKYHEEAWHLLKAAQWNEGHKVILAHIAADAIINENFAYLRRYLEELSPPEI
SSSVLDWTTGGKVFLDYINLCQRLEELKQGTPSAYDLERLQPAVTSLCHRVGSLECRSSK
ERLCQSEMAKKSANLLGTLLTFQSAGSATGRPPTRLVASHISGLPMPEDYALQELRELTR
SHLLEMTMGT
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacaaaagccaatggggtttggagctggatttggcggtggcacatcttccaca
tttggaagttcgacaccatttggacaaaataacaactcgttcgggaacaagccagctgga
gctgctggatttggaacgccagcctttggttcgacaacgccagccacaggaggcttgttt
ggtgcaaacaacaacacaagtactggaggcttgtttggccagactaatgcaagcacattt
gggaaccagtcaacagggttcaattttggcaacactcccagcacatcaagtggaggggct
ggagggttgtttggacagacacagactcagtcagcaggtgggctgttctcaacaccacag
tcaaccacgtcagcttttggagcaaagactccaggatttggtggattcgggacttccacc
gctcctgccggggggttgtttggccagcagaaccaggcaaacacaggggggatgttgttc
ggtcaggctggggcagcagggtttgctaacaatgccaatggcactacagtcaagttcaac
cctccaagtggccaggatacaatgatgaagaatggggtgtccgccagcatcaatacaaga
catcagtgcatcacagccatgaaggagtatgacaacaagtgtcttgaggaactgagactt
gaagactatcaggccaatcggaaaggcaagcagcagggtactgggggtgctggaggtggt
ttgtttggttctactccggcaacgtccagcactggcttctccttcggccagcaaccgcag
cagcaacagcaacaacagcaggcatcaacaggctttgccggtcagaatagctttggtaca
agcacatctacagcaagcactggcttgtttggccagaccaaccctcaggctagtggtgga
atgttcggtcagaacaagcctctgtttggtggcgccagtaccaccacaactgccagtacc
tctggctttggatttggaaataccaatcaagcagcagggttgtttggacaaaaccaacag
aataagcctctgtttggcacggctactactcagtcctctttgtttggtgccaacacaagc
acggcgccagcaacatcattcagctttggtaacaccggaggctttggcacgcaggcacca
tcgactggactgtttggcagcaagcctgcaggatttggagcagctacaacttcagcgcca
ggattttttggtcaaggtggcaatctctttgccaagccaacaacaacttcctcctttgga
tttggtggtacgaatacaggcacagcaggctttggagggtttggaggttttggttcaaca
gctaacacaggaggagctggtctgtttggcaacaagccaggtggttttggagcggctgca
gcctccacattaggggccggaacaaactccttcaacttcggtcaaactggacagactggt
gcaggactgtttggggccaacaacatgaacaagccttcaacctttggcttcaacttcaac
agcggtcagactacagcgtccacaggttttggaggtgtaggaactggctccggcttctca
cttggaggaaacaccagcacgctgggaacgacaaccaacccatcagcaagcaacaaccag
ctccagcagcagctcttggcactcaccagctcaccgtttggagattcccctctcttctgg
aatctcaaacagaactctgaaaaaagggaggaagttcttaaaccaaccaaccctgctgcc
cagaaagcagccctgagttcttcgagtcagtacaaagtgagtcctcgacccacggccaag
atcaagcccaagtcactacactcactcatgaatggaagcaagtctcagttattcgagggg
ttggaggatgaggatttcagttttggcaatgacacgttcatgccccgtcgaagtgtgaag
aaactgactctgaagaaagtaaatggagactcttccaatatgagcagagcctcatcacag
actgatgaacagccagacctacaatccttcagccaggacacacccagacctaaacctatc
acaagaacactacaagctgacttagatcgtgcggcccagagcccggacacagagccaata
ctccgtacaaagagcatcacagaacctaccagacactctcctatcaaagatgccaccagt
ctggatgacactattgctgccctgacttccaagaacaaagttctgtcaggggacagccat
tctgacatgaacaaatctcacagtgaacaagatccaaatgtctccatagagccccaggca
cagatggaggacttcgagccccacccaactggaatcatcttgacccgacctggctactac
actagtccgtcactagacagccttgtggagttgatggatgagaatggagattgctttgtg
gatgattttaccatcggacgagaaaattatggcagtctcttcttccctggttcaaccaat
gtttccaacttgaatctggatgaaattgttcatttccggcgtaaggaggtgatagtgtac
cccgatgatgaccagaaaccccctcttgaggatgggctcaacaagatagctgaggtaaca
ttggactgtgtctggcccagtgacaagtccacaaggtctccaatcaaggactcttccaga
ttgaggacaatgggctaccagacgaaaattgaagagatcacagcaaagattggagccaag
ttcatagactaccgacctgaaactgggtcgtgggtttttcaagtaaagcacttttctaaa
tatggtcttgttgatgactccgatgaagaggaagttactgaatcagaaaagaaaaaattg
aagcttgcaaaagaacaacaactgcagattcagaagttgaagatacaaactgaagcccag
atgaaggggaaggaggtcaaagggcaaggtgacatggagttccaacttcaaggtctgact
ggtaaaccagtatctcctccaaaggaagggtacgaagcccattacgcccagtcagagggt
atggatgactttgatgaggatatgccggacattactatggagaagttccctcgagatatg
gaagactcagatgatgatatgaagggtatgaccgacacgccctcctcccaccgcctcgcc
tccagcatgggggtcagtgctcacagcatgcaggtcatgaaggcttccttctttggagac
gacgactaccaggatgacttcaaaggcaagctgagtgggtttacatccggccagaccttc
ctgaagcagcaggacaagacaatgccaagtctgttcagccccgcactcaagtccaagtat
gtgagcccgctgagggtgacgcagtctccagtaccccaggagatgcagaaacagccgcca
ggtcttttctcacaaaagataatagccccagaagctcgtcgtccccctcagaattttggt
catcctccgctagccgaacacatgctgttgacgagtgggctgagccagaaggacacaccc
aggaagattgtggggtcgcgagtaaagagagacataccccctgtcagtgactccctcatg
tacaagaagcagaagctgatagtggacgcaggctgcctgatgggcaggtcattccgtgtg
ggctgggggcctggctggacactggtacacagtggccaaccctccaacttcgaggagaaa
gaggcacctcggcagacaccattctccctgttgcctggcatccagggtgggaagccggtg
agggcaggcagcaaggcttggactgtgacctgtgagaagatggacgtagcagattatctc
actggcaatgataagacagtcatatccacccacgaggagatgctggatgtgcagctggag
aactcacagcgagacacggatgggggctgcccactgtttgtgccatctcctggtgtagac
tctcttcatcagtatgcacagctgggagagaagctcttagaggagaacagtgggcaccct
gatgagagcagtgtggatcatatacggatggtgtggaacctctgtgtagctctgtggggg
aatctccccgagttcaggtactcagacactgatgagtatgctgttagccaggcacgaaga
gaagccttctcaaaatggttgtccgagacagcccagcctaagatcaaggaagaagtgcag
gagtccaagttcaagaatcaaggtcacctaatagccattttgagctatttaagtgggaga
cagataactgatgcgtgtacattggcacagaagtcaggtgatcacagattggcgctctca
ttggctcaagcagtcggcagccatgttcctcggcagatgttggcccggcagctggaggag
tgggcggagcttggggcaaatcactttatcgaccaagtaagactgaagatctactccctg
ctgtctggtcaactggtgtggtcatccagcacacctgtcaacacttgtgacaacatggac
tggaagcgagcccttgccttgcatctgtggtatcactgcaagcccaacgcaagcatatct
gaagccttgtcccagtatgaagatgccttcaaaagccgcaccccattcggcaaatactcc
aactccccactgcctccgtatctggaagacaatgacagttacgaggaagaggaggaggcg
atggatgagcgagatgaccatgtggtgcgggacacctgctaccacttgctcaagttgtac
tgtcagaagggccataggctggagaggatcctcaaccccaccacatccactgccaaccag
ctggattaccgtctcagctggcacctgtaccaggtgttacagtccatgtcctaccatcac
gtctccccctaccatgctgcctgtcttcacaccagctttgcggcacagctcgaagctctc
catctctggcactgggcagtatttgccctgctacatattgaagatgcactcagacgagag
actgcagtgagatcagtattagagcgccatgtgacgctgtcgaagagccccaagtactta
cacaaggaggagtttgtgagagagaggcttcgggttcctcacgcatggatacaccatgct
aaggctataaaagcaagatctgagaacaaataccatgaagaagcatggcacctgctgaag
gcagctcagtggaatgagggacacaaggttatcttggcacacatagctgctgatgccatc
attaatgagaactttgcctacttgcgtcgctacttggaagagttgtctccccctgagatt
agttcttcggtgttagactggaccacagggggaaaggtgtttcttgactacatcaacttg
tgtcaacgattagaggaactcaagcagggaacacccagtgcttatgatctggagagactt
caaccggccgtcacatccctctgtcacagggtgggcagcctggagtgcaggagttccaag
gagaggctctgccaatctgagatggctaaaaaatcagccaaccttcttggaactctactg
acattccagagtgcaggatcagcaacagggcgccctccgacaagacttgttgcatctcac
atcagtggtttacccatgccagaggactacgcccttcaggagctccgagaactgactcgt
agccacctgcttgagatgaccatgggcacgtag
DBGET
integrated database retrieval system
