Haliotis cracherodii (black abalone): 139450493
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Entry
139450493 CDS
T10814
Name
(RefSeq) transcriptional regulator ATRX homolog isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
hcra Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcra03000
]
139450493
03036 Chromosome and associated proteins [BR:
hcra03036
]
139450493
Transcription factors [BR:
hcra03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
139450493
Chromosome and associated proteins [BR:
hcra03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
139450493
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
139450493
NCBI-ProteinID:
XP_071088310
LinkDB
All DBs
Position
Unknown
AA seq
2042 aa
AA seq
DB search
MEGSSSKGSSKRKPAFTMKIKVSGKKKHESDSDNDDYDSDYSKRKSRSKRDNSDISDAES
IPDLPEGTVVVKPEPVKEKKIRFSGPEFSRVPDNLDIVNCTSCGRQINPNVSGAAKRHPE
LKVLICRKCYSYYRSGKIEQDEDGLDEQCRWCGEGGRLLGCDHCHNAFCKSCIIRNFSRA
ELTTVMADDGSKWKCYVCDPSKLKKLLRECDSLFKKIEKEKLKAKMQSSTDSKKSNSSKP
QKATGKSMSSKEHVTSKTHKDLVSIANFTVGTSNVVNVSTQLLGLTAGFHTMLEVLNVDL
NTSGDVKNSSREANSKKDHGAKTLDTGIKEFLKSVNTILCDALESKEKAPVENGETTEDE
SVVSNGHISLSDDDNSAAQTEEEVKVSRKSAREGRQVRKGSKTEEKAPIKNRDGKKDVSK
SSFRKESKMDVSVDDVVSNEVCDVDNDSDEFDVPVSFGPTDGAGDDHTVSKDEQTESKSD
ESESQTKDDNDGVKGSRPLSETENEAAQLELLKELAEEMCKEQKERKEEKINGEESSKVK
VPEKKKRELEKDKSEVTKEDIKDKNGDVKDKSGDSSKSAEDSSVDDSVSSSDLLMSSDSD
FAQSWSMKKKKEKGQRKSGRTEDKLERKKRKKQKKEKAERRSSRKRKEEKKLRKKKPKAT
DSEDDLEKEISKLEEEPEMKKKTKKEKTDSEEDLDEATTCKKEKNKEKKKEASDEEKKGR
KTRGKKKTETSSSDDGDDDNEVDDDEDEDEDDVLKMKNGKNRTPESANGKDLENEVAKKA
LMAELEDADEEGGDESGNDDSETDDDAKKKKKGAKKEKKPVKEEKDDSENDSENDSENED
SDDVPSTRKRIRSKLLDAKLSGSDSAKDRKSKKKKPKSEESDSEEIVVKKKSKKKKSSDE
DYSSDSSSGKKKKGKRKKKQQKKKKRGKKRKLTSDSESGDSSSSSSASDSDSEISLDTEE
EERREKLKEERKARRKAKGNKRRRIKEQKDSSDEKGRIETDSDIDGSDDDDDDDDDDDGK
SPDKSGRKNIRKIKSDKKLTDDTKRARKAEECRRKRVAERQKEFNHVVQITDETTKCPIT
TQLILEMDKEKKEPIIQVNKKLVRKLKPHQVEATQFMWDCLCETSDRIKKKEGSGCILAH
CMGLGKTLSVISFVHTMLANEKCTSMRTCLIVCPLNTVINWSNEWVMWFDEKDQLDVYEI
SSVKQNWPRADYLKEWHEGGGIMIMGYEMYRNLTQSARIKNKKLKAIFLKTLVDPGPDLV
VCDEGHILKNDSSSISQALNKVRTRRRVVLTGTPLQNNLLEYHCMASFVKPNLMGTRKEF
LNRFVNPITNGQHSDSTAFDVKVMGRRAHVLHEMLAGCIQRRDYSALTKFLPPKFEYVIS
VRLSPVQIELYEKYLELAGIGVDGGPTTNNRGARLFSDYQNLMKIWTHPWVLKLAEIRAD
NRMKYDDSEDSFIDNSTDEEMASMTDNSEDSVMNVSKSDSGESVEAGPSNRGSRRSRRGK
PPPEDSDKEEVVKDWKTRSRGGEDDGIEIDDGPKPVSSEWWAEYVKEEDQSNLDLSGKLL
LLFEILRMCEEIGDKVLVFSQSLLSLDIIEYFLDFIDKKAEEAAMQKEEERLKKEKEKEE
KEKEEKGKEKDGKEKEEKDQNGEAKDGEKKEDGEKKEDGEKEDESEEFVQTVFGKSWTKG
ADYFRMDGSTSPQLRSQWSDHFNDPENFRSRLFLISTKAGSLGINLVAANRVIIFDASWN
PSHDIQSIFRVYRFGQTKPCYVYRFLAQGTMEEKIYERQVTKQSLSQRVVDEHQIDRHFT
SADLSELYHFKPERLDDPNQPKTIHALPKDVLLAELLKQDKQIVRFHEHDSLLENRADQT
LTEEEKKAAWEEYDNERKGMTNRVAQASTASGVGMFSPDNVLQIVQMVKMRFPNLPPDLF
QAQVQAILQQQILYQQSMQNQQIEQQRLMEMHRLQRIQNDIRSQQRQIQVLNRNRLAYPR
GGGAMGPRMGMSSGTQPRIPNQAGALRSILTTPSGSTGKKDASHSRSTTPNNPPVVIDLS
KS
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcaagctcaaaaggctcctccaagaggaaaccagcatttaccatgaagata
aaagtgtctggtaagaagaaacacgagagtgactccgacaatgatgactacgattctgat
tattccaaaaggaaatctaggtcaaagagagacaactctgacatttcagatgctgagtcc
atacctgacttgcccgaaggtactgttgttgttaaaccagaacctgtgaaagaaaagaaa
atacggtttagcggaccagaattttccagagtaccagataacctggacatcgtcaactgc
acgtcctgtgggaggcagatcaaccctaatgtgtctggagctgctaagcgacacccagag
ctgaaagtcctaatatgcaggaaatgttacagctactatcgcagtgggaagattgagcag
gacgaggatggattggatgagcagtgtcgatggtgtggggagggaggaaggctcctcggt
tgtgatcactgtcacaatgctttctgcaagtcctgtatcataagaaacttcagccgggcg
gaactcaccacagtcatggctgatgatgggtctaagtggaagtgctatgtgtgcgaccct
tctaaactgaagaaattgttgcgagaatgtgactctttgttcaaaaagattgaaaaggaa
aagctgaaagccaagatgcagagcagtacagactccaagaaatcaaacagtagcaagcct
cagaaagcaacgggtaaatctatgagtagtaaagagcatgtcaccagtaaaacacataaa
gatttagtgtcgatcgccaatttcacagtaggtacatcaaatgtagttaacgtttctacc
caactgttagggttaacagctggctttcatacaatgttggaagttctaaacgttgatctt
aatacatcaggagatgttaaaaatagcagtagagaggctaatagtaagaaggaccatggt
gccaaaaccctggatactggcatcaaggaattcctcaagtctgtcaatacaatcctatgt
gatgccttggaatctaaagagaaagccccagttgagaatggtgaaaccaccgaggatgaa
agcgtagtttccaacgggcatatttctctaagtgatgatgacaatagtgctgcacaaaca
gaggaggaggtgaaggtcagtaggaaaagtgctagagaaggtcgacaggtcagaaagggg
tcaaaaacagaggaaaaagctcccattaaaaacagggacgggaaaaaagacgtgtcaaag
tcttcttttaggaaggaatccaaaatggacgtcagtgtagatgatgttgtatctaatgaa
gtctgtgatgtagacaatgattcagatgagtttgatgtcccagtctcatttggaccaact
gatggagcaggggatgaccatactgtaagtaaagatgagcagactgaatctaaatctgat
gaatctgaaagccaaacaaaggatgacaatgatggtgttaagggctcgaggcctctaagt
gaaactgaaaatgaggcagcccagttggaattgctgaaagagttggcagaggaaatgtgt
aaggaacagaaagaaagaaaggaagagaaaattaatggggaggaatcgagcaaggtgaag
gtccctgaaaagaaaaagagggaacttgagaaggacaagagtgaggtcacaaaggaggac
atcaaggacaaaaatggggacgtcaaggataaaagtggggacagttctaagagtgccgag
gattcatcagtggatgacagtgtgtcgagctcagacctcctaatgagttctgacagtgat
tttgcccagtcatggagtatgaagaagaaaaaggaaaaaggtcagagaaaatcaggaaga
acagaagacaaattggagagaaagaaaagaaagaagcagaagaaggaaaaggctgagagg
agatcttctaggaagaggaaagaagagaagaaattgaggaaaaagaaacccaaagccact
gatagtgaagatgatctggagaaggaaatttcaaaacttgaagaagaaccagaaatgaag
aagaaaacaaagaaggagaaaacagactctgaggaggacttggatgaggccactacgtgt
aagaaggaaaagaacaaggaaaagaagaaggaagcgtctgacgaagaaaagaaaggtaga
aagaccagggggaagaaaaagaccgaaacatccagctcggatgatggtgatgatgacaat
gaagttgatgatgatgaagatgaagacgaagatgatgtgcttaaaatgaagaatggaaag
aacaggacacctgaatcagcaaatggcaaggaccttgagaatgaggtagcaaagaaagct
ttgatggcggagttggaagatgctgatgaggagggaggcgatgagagtggcaacgatgac
agcgagacagatgatgatgctaagaagaagaaaaagggagccaagaaagagaagaagcct
gtgaaggaagagaaagatgatagtgaaaatgacagtgaaaatgacagtgaaaatgaggat
tctgatgatgtgccaagtacaaggaaaagaatacgtagcaaactgttagatgctaagttg
tcaggcagtgactctgctaaagacaggaagtctaagaaaaagaagccgaaatcggaggag
agtgattctgaggagatcgtggtcaagaaaaaatcaaagaagaagaaatcatcagatgaa
gattattcaagtgattcaagttcgggcaagaagaaaaaaggaaagagaaaaaagaagcag
cagaaaaagaagaagagggggaaaaagaggaaactgacaagtgactctgaatccggggat
tcatcatcttctagttccgcaagtgattccgacagtgagattagcctggacacagaggag
gaggagaggcgggaaaagctgaaggaggaacgcaaagccaggcggaaagctaaggggaat
aagcgccgtagaatcaaggagcagaaagactcttctgatgaaaaggggagaatagagacg
gattcagatattgatggaagtgatgatgatgatgacgacgatgatgatgatgatggcaaa
tcaccggacaaatctggcaggaagaatattcgtaagatcaagtctgacaagaaactaaca
gatgatactaagcgtgcccgcaaagcagaggaatgcaggaggaagagggttgctgaacgc
cagaaagagttcaaccacgttgtgcagataacggatgagactaccaagtgccccatcacc
acacagttgattctggagatggacaaggagaagaaggaacctatcatacaagtgaacaag
aagctggtccgcaaactcaaacctcaccaggtggaagctactcagttcatgtgggactgc
ttgtgtgagaccagcgaccgcatcaagaagaaggaagggtctggctgtatcttggctcat
tgcatgggcctgggtaaaacattatcggtgatatcgtttgtgcacacaatgctggccaac
gagaagtgcacatccatgagaacatgtctgattgtgtgtcctttgaacacagtcatcaac
tggagcaatgaatgggtcatgtggttcgatgagaaggaccaattagatgtgtatgagata
tcgagcgtgaaacagaactggcctcgcgctgactacctgaaggagtggcatgaaggaggg
ggcatcatgatcatgggctatgaaatgtatcgcaaccttactcagagtgctcgcatcaag
aataagaagttgaaagccattttcctgaaaacgcttgttgatccaggtcctgaccttgtt
gtctgtgatgagggtcacatcctgaagaatgattcatcgtcaatatcacaggcgctgaac
aaagtccgcaccaggcggcgggttgttctcacaggcacacctttgcagaataatctcctg
gaatatcactgcatggccagttttgtgaagccaaacctaatgggtacaaggaaagagttt
ctcaacagatttgtcaacccaatcacaaatggtcagcactccgactcgacagcctttgac
gtgaaagtgatgggacgtcgagctcacgtcctgcacgagatgcttgcagggtgtattcag
agacgagattattctgcccttaccaagttcctgccacccaagtttgagtatgtgatatca
gtccgcctgtcacctgtccagatagaattgtatgagaaataccttgaattggcgggcatc
ggtgtagatggaggacctaccactaataatagaggtgcgcgactcttctctgactaccag
aacctcatgaagatctggacacatccctgggtgctgaagctggctgagatccgagctgat
aacaggatgaagtatgatgatagtgaagactccttcatcgacaacagcacggatgaggag
atggcgtctatgactgacaacagtgaggacagtgtcatgaacgtcagtaagagtgactcg
ggggagagcgtggaggcagggcccagcaacaggggctctcgccgctctcggcgggggaag
ccacctccagaagacagtgacaaggaggaagtggtcaaagactggaagacacggtcgaga
ggtggagaggatgatgggatcgagatagatgatgggccaaagccagtgagcagtgagtgg
tgggctgagtatgtgaaagaagaggaccaaagcaatttggatctcagtggcaagctcctg
ctcctcttcgagatcctccgcatgtgtgaagagatcggagacaaagtgcttgtgttcagc
caaagtctgctgtcactggacatcattgaatacttcctggatttcatcgacaagaaagca
gaggaggcagccatgcagaaggaagaggagagactaaagaaagagaaagaaaaagaggag
aaagaaaaagaagagaaggggaaagaaaaggatgggaaggaaaaggaagagaaagaccaa
aatggtgaagccaaagatggagagaagaaagaggatggagaaaagaaagaagatggagag
aaggaggatgaaagtgaagagtttgtccagaccgtgttcgggaagagctggactaagggg
gcagactattttcgaatggatgggtctacaagtccacagctccgcagtcaatggtcggat
catttcaatgatccggaaaacttcagatctcgcttgtttctgatctcaaccaaggcagga
agtcttggtattaacctggttgcagcaaaccgtgtcatcatcttcgacgcttcgtggaac
ccgtcgcatgacattcagtccatcttcagggtgtacagatttggacagactaaaccctgc
tatgtctacagatttttggctcagggtactatggaagagaagatctatgaacgacaagtc
acaaaacagtccctctcccagcgagtcgtggacgaacatcagattgaccgacatttcact
tcagctgacctcagcgaactttaccactttaaacctgaacgccttgatgatccaaatcag
cccaaaactatacacgccttgccgaaggatgtactcctggctgagctcctgaagcaggac
aaacagattgtcaggttccacgagcatgactccctgctggagaaccgtgctgaccagaca
ttgacggaagaggagaagaaggcagcctgggaggagtatgacaacgagaggaagggcatg
accaacagggtggcccaggccagcacagcatctggtgtgggaatgttcagcccggacaat
gtcctgcagatcgtacagatggtcaagatgaggtttcccaacctgccgcccgacctgttc
caggcccaggtccaggccatcttacagcagcagatcctctaccagcagtccatgcagaac
cagcagattgaacagcaacggctaatggagatgcatcgactacaacggattcagaatgac
attcgcagccaacagcgtcagatccaagtcttgaaccgcaacagactagcctatccccgt
ggaggtggtgcaatggggcccaggatggggatgtcatcaggcacacagcctcggataccc
aaccaggccggagcgctacgcagcattctcacgacgccaagtggcagcaccggaaagaaa
gatgcctcccactcacgcagtaccaccccaaacaaccctccggtagtgatagacctgtcc
aaatcttga
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integrated database retrieval system
