Haliotis cracherodii (black abalone): 139450549
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Entry
139450549 CDS
T10814
Name
(RefSeq) protocadherin-11 X-linked-like isoform X1
KO
K16498
protocadherin delta 1
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
139450549
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hcra01009
]
139450549
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcra04515
]
139450549
Protein phosphatases and associated proteins [BR:
hcra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139450549
Cell adhesion molecules [BR:
hcra04515
]
Cadherins
Protocadherins
139450549
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Fibulin_C
CNOT1_HEAT_N
TMEM154
DUF4446
Motif
Other DBs
NCBI-GeneID:
139450549
NCBI-ProteinID:
XP_071088396
LinkDB
All DBs
Position
Unknown
AA seq
1158 aa
AA seq
DB search
MTVKMASKCVSKCVCVLFLQVCLIVLCRSQDSVITYHIPEEQDIGWFVGNLARDSTLYLT
IDESEFQRMKFNFFTQGNPYVKLFHMDEKSSTIRTAEVIDREEVCSFKILCEMKLEIAVY
IRDPKRGTYDLYKLMQVKMVVDDINDNTPMFPHKVIHLSVPESVPVNHRLLASGAIDKDM
GQNNSVQEYQLIPRNGMFGLDVVKNLDGSADLAIIVKHRLDRETRDFFQLMVKAMDGGMP
QKTGSAIINITVTDVNDNRPAFLDSTFNVSIQENKPKNSTVVVVSAVDQDAGSNGKISYY
FSQRVSQTVRQSFAIDEKTGIVFANGPIDYETQTQFQFMVEAKDHGNPSLSSLAAVIINI
LDVNDNYPHISINLAPEASHISEGMETGKFIAHVSVSDADVGMNSLVMCSLNDHHFALEK
FYENLQNIYKVVLAQRLDHETAATHKVTITCKDQGDPPKSNSTSFIITVMDENDNAPVFS
GHSYSGSIIENNSVGEEILQVTANDWDGGENGRVTYSLDSAGKNYFSIIPDTGIIKAIKS
IDRERYPELHFHVVATDHGQSPKSSSSAVSIDVIDQNDEPPRFTKPVFFCYVQEHKPVGT
KAGNVSAYDPDNYRNAEYIYKLAPDSKMSEFFSVDTWNGIITTLKEFDREKQHMFNFSVI
VQDSQVPSFRDVANVSVFILDANDHKPMITYPSQSNNSVSVPYNTQIHTVIAHVKAHDTD
DMTYSRLYFKITEGNSRNIFHIDRISGELEVSSPMMPIDAGSHQLIIAVQDNGNPPKTAY
AELNIIVTANGTAATLNSSKDDNMLIVIILVAVTVVLTLAILTTICMIKRIDKDRQRTQV
VVLKGEDEKMFDEKKRDSFSSVSRDSNENEDAEMKKKNGRKEVSFTFDEDKEAHNTSGSS
GIGSFSTFRCQNPEQQDPNNLQDAPSHGIPTSDSDIPSPAPDQADRQWAPPTNGVEARTL
LEILKKNEIDVSSEMSGETGTSDSGHGGSEEDLHAKTGQAQETEETKPGQFFPTTFHGGS
SRVPVYNDGRQSRNGRKTAPSTLRGSRSQNFRSQPQQFPSNPRTFETMDNGYHYNTAPHP
PRSAQADNVLHTFSSPKSECKHFQPRHLDFVPGSSRGRPETPIRIEEDRSSTSGSYTLNS
NRRTPDIDHMMFNSDVVV
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaagatggcatcaaagtgtgtttccaaatgtgtgtgtgtcttgttccttcaa
gtttgtttaattgtgctgtgtcgttcgcaggattctgtgatcacttatcatattccagag
gaacaggacattggatggtttgttgggaatcttgcacgagacagtacgttatatttaaca
atagatgaatctgaatttcagagaatgaagtttaattttttcactcaaggaaatccgtat
gtgaaactatttcatatggatgagaagagcagtacaataagaactgcagaagtcattgat
cgggaagaggtttgctcatttaaaatattgtgcgaaatgaagctggaaattgctgtttat
attcgtgatcccaaacgcggcacctatgatctgtacaagctaatgcaggtcaagatggtc
gtggatgacatcaatgacaacactcccatgtttccacacaaagtcattcatctctcagtc
ccagaatcagtacccgtcaaccatcgcctccttgccagtggtgccattgacaaggacatg
ggtcagaataattcagtccaagagtaccaacttattccaagaaatggcatgtttggtctt
gatgttgtgaaaaatttggatggaagcgctgatcttgctattattgtaaaacatagacta
gacagggaaacacgtgacttcttccaactgatggtcaaagcaatggatggaggtatgcca
cagaaaactggttctgccatcatcaatatcactgtcacagatgttaatgataaccggcct
gctttcctagactcaacattcaatgtaagcatccaggaaaataagcccaaaaattcaaca
gtggttgtcgtgtcagcagtcgatcaagacgcaggaagcaatggcaagatatcatactac
ttcagtcaacgagtatcgcagacagtgcggcaatcatttgcaattgacgagaagactggt
attgtttttgcaaatggaccaatagattatgaaactcagactcagtttcagttcatggtg
gaagcaaaagatcatggcaatccatcgttgtcttctctggcggccgtcatcatcaacatt
ctcgatgtcaatgacaactatccccacatcagcatcaatctagccccagaagctagccac
atttctgaaggtatggagacaggcaagttcatcgcacatgtgtcagtgtcagatgcggat
gtgggtatgaacagtcttgtcatgtgtagcctcaatgaccatcactttgccttagaaaag
ttttacgaaaacctacaaaatatatacaaggttgtactggcacaaagacttgaccatgaa
acggctgccactcataaggtcaccataacatgcaaggaccaaggcgaccctccaaagtcc
aattcaacaagtttcattattactgtaatggatgagaatgataatgctcctgtctttagt
ggtcattcctacagtgggtcaatcattgagaataactcagtgggggaggagattctccag
gtaactgccaatgattgggatggtggggaaaatggccgtgtgacttactctctagacagt
gctgggaaaaactacttctccattattccggatacaggtattatcaaagctatcaaatcc
attgaccgggaacgctaccctgaacttcatttccacgttgttgcaacagatcatggtcaa
agccctaagtcatcatcttcagctgtttctatcgatgtcattgatcaaaatgatgaacct
ccacgattcaccaaacctgttttcttctgctatgtccaagaacacaaaccagttggcacc
aaggcaggtaatgtttctgcctatgatcctgacaattaccgcaatgctgagtacatctac
aaattggcaccggattcaaagatgtctgagtttttttctgtggacacttggaatggaatc
atcacaaccttgaaggaatttgatcgtgagaagcaacacatgtttaacttttctgtaatt
gttcaggatagccaagttccaagtttccgagatgttgcaaatgtctcagtcttcatcttg
gatgcaaatgatcataaaccaatgataacatatcccagccaatccaataacagtgtgtct
gttccatacaacacacaaattcatactgttattgcccatgtcaaggcccatgatactgat
gatatgacatacagtcgactatatttcaaaattactgaaggcaattcaagaaacattttt
catatagatcggataagtggggaacttgaagtgtctagtccaatgatgcccattgatgct
ggcagccatcaactgatcatcgcagtccaagataatggtaatccccctaaaactgcttat
gctgagttgaatattatcgtaacggcaaatggtactgcggcaacattgaactcatctaaa
gatgacaacatgctaattgttatcattttagttgctgtcacagtggttctgacattggcc
attctgacaacaatttgcatgataaagagaattgataaagatcgccaaagaacacaagta
gtggtcctgaaaggagaagatgagaaaatgtttgatgagaagaaacgcgacagtttctcc
tcagtgtcacgtgactctaacgaaaatgaggatgctgaaatgaaaaagaagaatggacgt
aaagaagtcagtttcacgtttgacgaggacaaagaggctcacaatacaagtggttcatca
ggaattgggtcattctcaacattcaggtgtcagaatccagaacaacaggatcccaataat
ctccaggatgctccgagtcatggaattcccacgagtgatagcgacattccctccccagcc
ccagaccaggctgatcgacagtgggcaccgcctaccaatggcgttgaggctcgaactctg
cttgaaatactgaaaaagaacgagatcgatgtttcaagtgagatgtcgggagagacaggt
acaagtgacagtggtcatgggggcagtgaagaagaccttcacgccaagacaggtcaagca
caggaaacagaagaaaccaagccaggccaattcttccctacgacattccatggtggcagt
agtcgtgttccagtctacaacgatggtcgtcaatcccgcaacggtcgcaagacagcgcca
tctacactccggggctcaagaagtcaaaacttccgctcacaaccccaacagtttccatcc
aatccaagaacatttgaaacaatggacaatggctaccattataacacagccccacaccca
ccaaggtcggcacaggctgacaatgtccttcacacatttagtagccccaagtcagaatgc
aaacactttcaacctcgccatttagactttgtcccagggtccagtcggggacgaccagag
actccgattcgtatcgaggaggatagaagttccacttcggggagttataccttgaattcc
aatcgaaggacaccagacattgatcacatgatgtttaacagtgatgtggtagtgtga
DBGET
integrated database retrieval system
