KEGG   Haliotis cracherodii (black abalone): 139451125
Entry
139451125         CDS       T10814                                 
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
hcra  Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:hcra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hcra04121]
    139451125
   03400 DNA repair and recombination proteins [BR:hcra03400]
    139451125
Enzymes [BR:hcra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139451125
Ubiquitin system [BR:hcra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    139451125
DNA repair and recombination proteins [BR:hcra03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    139451125
SSDB
Motif
Pfam: SNF2-rel_dom Ank_2 Ank Ank_4 Ank_3 Helicase_C Ank_5 zf-RING_UBOX zf-C3HC4 zf-C3HC4_3 RING_XB3-XBAT31 zf-C3HC4_2 zf-C3HC4_4 zf-RING_2 Prok-RING_4 zf-RING_5 zf-RING_6 Rad50_zn_hook U-box T3SS_NleG
Other DBs
NCBI-GeneID: 139451125
NCBI-ProteinID: XP_071089023
LinkDB
Position
Unknown
AA seq 1463 aa
MFNARCVNNIKKLLKDGDHDGVQRLLQCVRERGHSYSHQGKKDPAPDMSPVGMAVTSGNM
DVVKALILSGFDPNERCVVDNCLKRPVHIAICAGHVDMVKSLVQDYKVKLYDQGEDSALF
WAIVSGSEELVVYLYDREDDLTLEQAIFTAVEFNRPSICSFIISRGVDLKLRCRKDLTPL
AYAVSLGNIDIVKMLIDAGSELKGVFPRGNSMLHLGVLSGHLDIVKFLCTVGVDIDKQNK
YGNTPLHLATFCGMYDIASYLVVDMNACLTKVEVDAKTPLAVSLVLGHTDIAHLLLGAGY
LPTHEEVSRILDDVDLSLKIDLAWMREQARDDSSSSDDDLQDVSDAEVMFDTITASFVKS
SMCPRLCKSSMCPRISNTASFVKSSMCPRINSHESVSLVFEGKIMGRGQRVTIFNGSSAQ
LGTLSQPYDIPMVSIMADGVARVDAVTLDLNENSKTVPIQLTLYGAIDNRDKCKTILKVA
EAAFRTVSKDNAGNSVAQEQSVPTGVTTHVPNNEGPGNAIPHPAAGHTASPLAALHYDPY
IQVDSHRQKLTHDEIISAIDQLFETLNAEDKTTEREPVEAVRTPLYPHQKQALHWMITRE
NEENLPPFWEKTHSGHYSNILLNHTTYERPPSIRGGILADDMGLGKTLEIISLILTNFVD
NRPLALPVPGVPRVRREKAVSESCSRVEPSESRSKSETRVAVANNIDDMFQRLQSYHEFT
EQMDEEHPTKKTACPTKLRFGKPDSSNIETAGMVTTRLDDMSDVGSTPTNSTINSTMQRK
ATITELVEPTNGKRKSLVNETDLVNEKELSKQRKLQLDSLYSESGFSAVCNAQSSIHTCD
ESVTEEPDVINVGVSSDVDKRSRFSGNVGRMEDEGVGASSKIQSDMCGEKYHFYDELPDL
EDEELCDEGSGADFMTATHCDEKGRTLCEKGDPRGTLIICPLCVLRTWQDQFEEHVHPNI
HIDVHLYHGSKRCKDSSFIKCKDVVITTYGIVRSEFKKYVNGEEAPLFTLNWLRIVLDEG
HIIRNPRALQTKAVLALKALRKWVLSGTPIQNRMLDLYPLVSFLNVTPLEQRHWWDSLLE
KPLQRGIEIIFIRVQHLMENIAMRRTKNMLVNGEPLVKLPKREVYMERIKMSDEESRRYK
YLEERGKIVIKQLVRDNEMGRQNYLVLEIILRLRQMSCHTYLVPQSWLPHDGTDAKNRDT
LVDRLQVISESDEDCSVCVEVLKNPVILPCTHCFCRLCILYTIKYMEQTNKTNATCPLCR
APISQDQIIELPAQPEPHIYGDWKSSTKVDALMSALVNQRSDDPSVKSLVASQFTSFLTL
IETPLRELKFRFVRLDGTMSVPQRMEAVKKFFDLEPGSPTIFLISICAGGLGLNLTAASR
VFLMEPQWNPAVEEQCFDRCHRLGQTKDVIITKFISEDTIEERMLDLQEKKRRMMQQAFK
KQQTATERKKQRIRDIKAVMNIV
NT seq 4392 nt   +upstreamnt  +downstreamnt
atgttcaatgcgagatgtgtcaacaatatcaagaagctgctgaaggatggcgaccacgat
ggagtccagcgtctgcttcagtgtgtccgcgagagaggccattcatacagtcaccaaggc
aagaaggacccagctcccgatatgtcgcccgtaggtatggcggtgacctctggaaacatg
gacgttgtcaaggcgctcatattgtcgggcttcgatccaaatgaacgctgtgttgttgat
aactgtctgaagagacctgttcatatcgctatatgtgctggccatgtggatatggttaaa
tctcttgtacaagactacaaagtgaagttgtacgaccaaggagaagattcggcgttattc
tgggctatcgtgagcggttcagaggagctggttgtttatctgtatgatagggaagatgat
cttacgctcgaacaagcaatatttactgctgtagaattcaacagaccgtccatctgttcg
ttcatcatatctcgtggcgtggacttgaagttaagatgccggaaagacctaacacctctt
gcctatgctgtatctctgggtaacatcgacattgttaaaatgcttattgacgctgggtct
gaactcaagggggtgtttcccaggggtaatagtatgctgcatctcggggtactgtccggc
cacctcgatatagtaaagtttctgtgcactgtcggtgtggatattgacaaacaaaacaaa
tacggcaacactccgttgcacctggctacattctgtggcatgtacgacatagccagttac
ctcgttgttgacatgaatgcgtgtctaacaaaggtggaagttgacgcaaagacaccgctt
gctgtatcgttggttctgggacatacggatatagctcatctccttttaggtgctgggtac
ctaccgacacacgaggaggtttcacggatactggatgacgtagacttgagtctcaagatt
gaccttgcctggatgagggagcaggcgagggatgactcgtcttcttctgatgatgactta
caggatgtgtccgatgcagaagtaatgttcgatactatcactgccagctttgtaaagtca
tcaatgtgcccaaggctttgtaagtcatcaatgtgcccaaggataagtaacactgctagc
tttgtaaagtcatcaatgtgcccaaggatcaacagccacgagtcggtatcacttgtgttt
gaggggaagatcatgggtagaggacaaagagttaccatcttcaacggcagcagcgcccaa
ctcggaaccctcagtcaaccttatgatattccaatggtatccatcatggctgatggcgta
gcaagagttgatgctgtaacactcgacctcaatgaaaacagtaaaacggtgcctatccag
cttacattatacggggctattgacaacagagacaagtgcaaaacaatcttaaaagtagct
gaggcagcttttcgtacagtaagcaaagacaacgccggcaacagcgtcgcccaggaacaa
agtgtacctacaggagtgaccacacatgttcccaataacgagggtccagggaatgctatt
ccacaccctgcagcaggccatacagcgtcacccctcgctgctctacattatgacccatac
atacaagttgatagccatcggcagaagttaacacatgatgagattatcagtgctatagac
cagctgtttgaaacacttaacgcagaggacaagacaacagaacgagaaccagtggaggct
gtgaggacgcctctgtatccccatcagaagcaagctcttcactggatgataacccgggaa
aacgaagaaaacctgccaccattctgggagaaaacacacagtggccattactccaacata
cttcttaatcacacaacatacgaaagaccacctagtatcagaggaggtattctggccgat
gacatgggactgggaaagacactggagatcatttctctgatactcactaactttgtggac
aatcggccactggctcttcctgtgcctggagtacctcgagtcagaagagaaaaggctgtt
tcagaaagttgctctagagtggaaccatcagaatccagatctaagagtgaaaccagggtt
gcggttgcaaacaacattgatgacatgttccagaggttgcagtcatatcatgagttcact
gaacagatggatgaggagcacccaacaaagaagacagcgtgtcctacaaagctgcgtttt
gggaagcctgacagttccaatattgagaccgcagggatggtgacaacaaggcttgatgac
atgagtgacgtggggagcacgcccaccaacagtactatcaatagcaccatgcagaggaag
gcaaccattacagaattagtagagccaacgaatggaaagaggaaatccttagttaatgaa
acggatttagttaatgagaaggaactatcgaaacaaagaaaactgcaacttgacagtctc
tattcagaatcaggattttctgctgtgtgcaatgcacagtcctccattcacacttgtgat
gaaagtgttacagaagagcctgacgtaataaatgttggcgtttcatcagatgttgacaaa
cgttcgagattcagtggcaatgttggtagaatggaggatgagggtgtgggtgcatcaagt
aagatccaaagtgacatgtgtggagagaaatatcatttttacgatgaactgcctgatctg
gaggacgaggagttgtgtgatgaaggatctggtgccgattttatgacagctacgcattgt
gatgaaaaagggcgaactctctgtgaaaaaggcgacccacgtggcacactgattatctgt
cctctgtgtgtcctcagaacctggcaggatcagtttgaagagcatgtccatcctaacatc
cacattgacgttcacctgtaccatggctcgaaacgttgtaaggattccagttttattaaa
tgcaaggatgtcgtaattacaacatatggaattgtgcgcagtgaattcaagaaatacgtg
aatggggaggaggccccactgtttacacttaactggcttcgcatcgttttggatgaagga
catatcatccgaaacccaagggctctgcaaacaaaagctgtgcttgcactcaaagcactg
cgcaaatgggtgctctcaggtacacccatccagaacaggatgctggatctctacccgctg
gtcagtttccttaacgtgacgcctctcgaacagaggcactggtgggacagtttgttggag
aaaccactgcaacgtggtatagagattatctttataagagtgcaacatctcatggagaac
atcgccatgcgtcgtacaaagaacatgctcgtaaatggagagcctctcgtgaagctgccc
aagagagaagtgtacatggagcgaatcaagatgtcggacgaggagagccggaggtacaag
tacctggaggagcgagggaagatcgtgataaagcaacttgtacgagacaatgaaatgggt
aggcaaaactaccttgtccttgagatcatccttcgtctacgtcagatgagttgtcatacc
tacctggtgcctcagtcatggctgccacatgatggcacagatgcaaagaatcgcgatacg
ctggtggacagactgcaggtcatcagcgagtctgatgaggattgctctgtgtgtgtcgaa
gtcctgaagaatcctgttatactgccgtgtacacattgcttctgtcggctatgcatcctt
tacactataaaatatatggagcagacgaacaagactaatgctacatgtcctttgtgccgt
gcgccgatatctcaagatcagataattgaacttccagcacagccggaacctcatatctat
ggcgactggaagtctagtaccaaagtggacgccctgatgagtgccctggtgaaccagaga
agtgatgacccatctgtaaagagtctggtagcctcgcagttcacctctttcctgacgctc
atagaaacgccacttagagagctcaagttcagatttgtgagacttgatggcacaatgtct
gtaccacaacgcatggaagctgtcaagaagttttttgacctcgagccgggatctcccacc
atcttcctcatctccatttgtgcaggtggcttgggtctcaacctgactgcagcgtccagg
gtgttcctcatggagccgcaatggaacccggccgtggaggaacagtgtttcgacagatgc
caccgcctaggccagaccaaagacgtcattatcacaaagttcatctcggaggacactatt
gaggagcgaatgttggacctccaggaaaagaagaggaggatgatgcagcaagctttcaag
aagcaacagacggccaccgagaggaagaaacagaggatacgtgacataaaagctgtcatg
aacattgtgtga

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