Haliotis cracherodii (black abalone): 139452707
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Entry
139452707 CDS
T10814
Name
(RefSeq) huntingtin-like isoform X1
KO
K04533
huntingtin
Organism
hcra Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139452707
04131 Membrane trafficking [BR:
hcra04131
]
139452707
03029 Mitochondrial biogenesis [BR:
hcra03029
]
139452707
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
139452707
Membrane trafficking [BR:
hcra04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
139452707
Mitochondrial biogenesis [BR:
hcra03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
139452707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
Motif
Other DBs
NCBI-GeneID:
139452707
NCBI-ProteinID:
XP_071090376
LinkDB
All DBs
Position
Unknown
AA seq
3001 aa
AA seq
DB search
MATIEKLIKAFEGLKVFQPGGLGTEETTKKKDQPPSKKDKMVNCNIVADCICAPNMRSIA
DFPKFLGIAMEAFLTLCDDQESDIRMVADECLNRTIKTLLETNLGRLQVELYKEIKKCGP
SRSLRGALWRFADMCHLIRPQKCRPYIVNLLPCLARICRRDDEEAVQETLSSSMQKICPG
LMGFANDTEVKGLLKAFLPNLKSNSAVCRRTAASSLTLICQYSRCPITFFSYLITILLEL
VLPVDVEHDVYTLLGVILCMRTIIPQLVQSDTRDQGLKGSFGVIQKEKEEGVNHDQILKM
FQLLLFYTNHPDHNVVTAALEAMQQLLRTPPPQLRRLLLASGSIQRTLIYQKDFEERERF
RVESSAELPTISDDTGLEEEEGSDVTGQTASSSDTSAFVSDLDPGSVEGLNMRRLSADSR
REGKSESDLTDLMAGTDATVVVTSDNDYSNVEIGDLNEEKSERSTLSHSSSVETLLSIKS
LSPKRRPSLRKGVSQDLNGNPEYDPLGGSDTPERSSPLPSPLPPGMREDAGNDIGSLLDE
ELPLLYCVRLLCRGFLLNGSEGGLLPDKVARVSLKSLALSCVASALSLCPKIFLYKLFPR
DLESGNQHIREVVLYASHPDPQLKGTTAMVIGSLIKAVLTEGRGDFKKWLKKHSPADIGE
VSLERLVETLVHIMCDQSSVAIRLTLIALQLCLSNLLESCHGKVGISVMLDLLDVKNNPY
WLVKVELLELLGGINFKVVCFLGTLCKDHKKGCHNFLGRLNLQDHYLSHVIIPLLGDEDG
RVRHAASRTLLRLVPKLFFAVDNCQQDPVTAIARDLTDGLLYPLMSEWAEEPPPLVQGLI
PPYHFSPTFTIKPHLESSLSRVVQQLLQQLHKAQTKHLTSGCCHAMCLLSEEYLVSCYAS
SWGCGPATPLIPKDSSSRINMKRPPSRSLSSSSTFSLEELTSGSGGGPLPVILALLLSSP
AALDLSTHQDLIQLAGNLLAGSAFKTFRGSDETASLAGSGDEGKWAAVSDRLLVPMIEHL
LSHVARVLNACAHVIDEQVPGPPQMKPSLPSLPNAPSLSPVKRKVKGDKESQGGAGAGQA
GDAKSDKKTPQKDQKEPEKEKSKKDGLGIFYSLPQYMKVYEMLRGAYSNYKISLDLNSSD
KFCNLLKVTLAVFSQILEIATLFDIGKYAEEFLGYLKSTMTMEPTFTVLCVQQLLKALFG
TNLANQWESQQSVFHSRKPGKPMRVMTGLKPGIYQCCLNQPYSLMTHSFAGAFLRAANQT
DQEESQSSLMWLRKRVERKTPAILKPGSKVDKSAIASYIRLFEPLVIKSLKQYTVTSSLE
LQRQVLDLLAQLVQLRVNYCLLDSDQIFIGFVLKQFEFIEEGQIRNSEMLVPHIFQFLVM
LSYERFHSKSIIDMPRIIHRCDGIMASGLQPTTHAIPALRCVVYDLFLLRGNSKSDVGKE
LETQREVVVSMLLRLINYYQALEMFVIVLQQCHRESEDKWKRLSRQVIDTVLPALAKQQI
NIDRQASLDVLHRLFESVAPSVFRPVDILLKGLLGSPGDISCVQGLQRWMCLVLSVMRVL
VSQSKEEVVLSRLVDVGLSFPLTRDAGERDTNIEDYSDLIPEEIFAWFLLQAIGKCAETL
NKESVTIHSSDNNLHFLVQQMCHLILYITHMFQSGLYRRVATAAMRIMQMDCPRNVYSVR
EINQLLLALNTVYPTLTMLWCNVLILLNFDDQSMWSQVMHTPQKYLMVSPSRQGNMVDLK
KRTLQCCQLELLRRGGLILFCDYVCENLNDAEHMTWLIINHVSDLIELSDESPVQDFISA
IHRNSAASSLFIQAIHARCENVSRPSLVKKTLKCIEAIHLTQSGALLTLLIDKFLNTHQL
AVARMCDTIACRRVEMLLAENYEDSSKQLPLEDLEKLLQFMRSNGLIQRHARLVSLLNKF
LILQSPDNKHAKSPEKTHPLALTPEQVTNIEVNKDFYLSVVKDQCFQMDPNTRECAFLLQ
RLDYADILSITMTKEFSLAVLEECISLGAYRTLVRYNRDRETHTEQKLPPSEPSLDTLFQ
AAQLTLFRHINNIINHLPIPHQNLNFRLSLSAKEIRYMERIEDLFTDSTWFVMNFQLTSA
LTQYLVSVQRFPWKPGVPAESHGDVCRFSVLCMEMLSWLLQHNQLPTTEQIQTCLECVSL
VLQNQVFSSVIGQTDHSTWVCTITSALYQLMSSLVVLPGEKVAVLAHQDREDDSMMHSRD
ESTYLIRACDQISELVHCLQTRLKPKTQTSLPLPPVIAAPIRNIVIGLGRLQLVNTYART
PPLVWKLGWAPSPSGDLKTKLPPLPVDFLQEKEVLREFVLRVNTLGWVSRQQFEETWMSL
LALLNPVSGGMDLTHEEEVDRSQVMVISVKAITALLLQSILIPFAGNPGNSMFEVQPRDK
PLAFLHTRCGKKLSMIRGLIEQEIQNLCAARPDRQSHHAYAGYRRRTDSLHCDLFEDNLE
RETGMEDFGQGQISLEAIWSVVGTLETNMSESDTTDSMDSPLQEQVRANIPLSPIKSQER
SITLSGLDIHSCLQFLLELYTPWLACDSNSRPPLMLINAVVESIVCLSDLFMEREQFELM
LDTLLDVHKTHPSEDELVTQYLNVGICKAVAVVGADSSVAERVVKLIDVGLKSTHLPSKV
STLHGMLYLLEANIADLTKSILPLVTDFLLKHLSAVSNACITSQQFELTMWAVAFYVLEN
YHDDLRDAEFPSKMLTLAVSTASGSEDSVSTAVFLTIMKGTERLLLTDVLSRGDMETIMK
LSMDRLCLPSPQRALAALGLMFTCMYSGKQFDQYSPRPRDEMEPIFSDNGFSFVYQDPES
LILAMERVTVLFDRIKKGYPYEARVITRLLPAFLADFFPPQDIMNKVIGEFLSSQQPYPQ
LIAKVVFQVFNNLHQQNQQSLVRDWVMLSLSNFTQRSPVAMAMWSLTCFFISASTNQWLK
ALFPHVIGRMGKMETIDRKLFCLSALDFKSQLTEDLHVFVSTFQAVAQPDSPYQDLVNCL
T
NT seq
9006 nt
NT seq
+upstream
nt +downstream
nt
atggccaccattgagaagctcatcaaggcctttgagggcctgaaagtcttccagcctggt
ggcctgggcactgaagaaacaacaaaaaaaaaggaccaacctcctagcaagaaagacaag
atggtcaactgcaacattgtagcagactgtatatgtgctcctaacatgaggtctattgct
gatttccccaagttcctgggaattgcaatggaagcattcctaactctgtgtgacgatcag
gagtcggatataagaatggtggcagatgagtgcttaaatcgaacaataaagactctgttg
gaaacaaacctgggtcgcctgcaggtggagctgtacaaggaaattaagaagtgtggcccc
tcgcgtagtctgaggggggcactgtggaggttcgcggacatgtgccacttaatcaggccc
cagaagtgcagaccctacattgtcaatttacttccttgtttggcgcgcatctgtcgccgt
gacgatgaagaggcagtccaggagactttatcttcttccatgcagaaaatctgtcctggc
ctcatgggctttgcgaatgatacagaagttaaaggtttactgaaagcattcctaccaaac
ctgaaatctaactctgccgtgtgtcgacgtacagcagcgagcagcctgactctcatctgc
caatactcccgttgtccaatcaccttcttctcatatctcatcaccattctccttgagcta
gtgttgccagtggacgtggagcatgatgtgtacacactgctgggtgtgatcttgtgtatg
cggaccatcatcccccaactggtacaatcggacacgcgggaccagggactcaagggcagc
ttcggggtcatccagaaggagaaggaggagggggtcaaccatgatcagattctcaagatg
ttccagctactcctgttttacacaaaccaccctgaccacaacgttgtgacggcggcgctg
gaggcgatgcagcaacttctgcgcaccccgccaccccagctccgccgtcttctgttggcg
tcaggcagcatccagagaaccctgatttaccaaaaggattttgaggagcgggagcgcttc
agggtagaaagttcagcggagctgccaaccatctcagacgacactggtctggaagaggaa
gaaggttctgatgtgacagggcagacagcatcatcatctgacacatctgcttttgtatcc
gaccttgaccctggatcagttgaaggtcttaatatgcggaggttgtccgcggactcaaga
cgagagggaaaatctgaatccgatctgacagacttgatggcggggacagacgcaactgtg
gttgtgacatcagacaatgattattccaatgtagaaataggagatttgaatgaagaaaag
tctgaacgttccacattatcacatagcagtagtgttgaaactcttctaagcatcaagagt
cttagccctaaaaggcgaccatctttgaggaaaggcgtgagtcaggacttgaatggaaac
ccagagtatgaccccttggggggctcagatacaccggagaggtcgtctccccttcccagt
cctctacccccaggaatgagagaggatgcgggcaatgacatcggttcactgttagacgag
gagctgccactgctgtactgtgttcggttattgtgtcgggggttcctgttgaatggaagt
gaggggggccttctcccagataaagttgcccgagtgagcctcaagtcactggctctcagc
tgtgtggcttcagcgttatctctctgcccaaagatcttcctctacaagctgtttccccgg
gacctggagagtggtaatcaacacatccgggaggtggtcctgtatgccagccacccagac
ccccagctcaagggcactacggccatggtgattggaagcctcatcaaggccgtcctcaca
gaagggagaggggacttcaagaagtggctcaagaaacattccccagctgacataggtgaa
gtgtcgctggaacgcctggtggagaccctagtccacatcatgtgtgaccagtcatctgtg
gccatccgactgacgctgatcgccctacagctatgtctgtccaatctccttgagagctgc
catggcaaggtcgggatcagcgtcatgctggatctcctggatgtcaagaataacccatac
tggctggtcaaggtggagctgctggagctactgggcggcatcaacttcaaggtggtgtgc
ttcctgggcacactctgcaaggatcacaagaagggctgccataacttcctcgggagactg
aatctacaggaccactatttgagtcatgtgataattccgttgctaggagacgaagatggc
agagtcagacatgcagcatcaagaacattgcttaggcttgttccaaaacttttctttgct
gttgacaactgccaacaagacccggtgactgcaattgccagggatctgaccgatggtttg
ctgtatccgctgatgtcagagtgggcggaggagccacctccccttgtacagggtctgatc
cctccctaccacttctcccccacattcaccatcaagccccacctggagagcagtctgtct
agggtggtccagcaactcttgcagcagctgcacaaagcacagaccaaacatctgacaagt
ggatgttgtcatgctatgtgtctgctgtcggaggagtacctcgtgtcctgctacgcctca
tcctggggctgtggccctgccacaccgcttattcccaaagatagctcgagtagaattaac
atgaagaggcctccaagccgctcacttagttcctccagtactttcagcctagaggagttg
acatcggggtctgggggtggtcccctgcctgttatcctggccctgctgttatcgtcaccc
gctgccctcgacctctctacacatcaggatctcatccagctggccgggaacctcctagca
ggctctgccttcaagacattccgtggatctgacgagacagcgagcctggcagggtcgggc
gatgagggcaagtgggcagcagtcagtgacaggctgctggttcctatgatagaacacctt
ctcagccatgtggctagggtgctgaatgcgtgtgcccatgtgatagatgagcaggtgcca
gggcctccccagatgaagccctccctcccgtccctgcccaacgccccctccctcagcccg
gtcaagcggaaggtgaagggagacaaggagtcacagggtggagcaggggcgggtcaggca
ggggatgccaagtctgacaagaaaacaccgcagaaagaccagaaggagcctgagaaggag
aagagcaagaaggatggactggggatattctacagcctgcctcagtatatgaaggtgtac
gagatgctcaggggagcttactctaattacaagatctccctggacctgaacagctccgac
aagttctgtaacctgctgaaggtgacgctggcggtcttctcccagatcctggagattgcc
acactctttgacatcgggaagtatgcagaggagttcctgggctacctgaagagcactatg
accatggagcccactttcacagtgttgtgtgtacaacagctgttgaaggctctgtttggc
accaaccttgccaaccagtgggagagtcagcagagtgtgttccacagccgcaagccaggc
aagcccatgagggtcatgacaggcctgaagccaggcatctaccagtgttgtctcaaccag
ccctactcactcatgacccactccttcgccggggccttcctccgcgcagccaaccagacg
gaccaggaggaatcacagagttcactgatgtggctgaggaagagagttgagaggaaaact
ccagccatcctcaagcccggaagcaaagtggataagtcagcgatagcatcctacattcgc
ctgttcgagccgttagtcatcaagtccttgaagcagtacactgtgacaagctcgctagaa
ctccagcgccaagtcctcgaccttctggcccagctggtgcagctccgagtcaactactgt
ctccttgactccgaccaaattttcattggttttgtactaaaacagtttgagttcattgag
gagggccagatcaggaactctgagatgctggtgccccacatattccagttcctagtgatg
ttgtcgtacgagaggttccacagcaagtccatcattgacatgcctcggattatacaccga
tgtgacggcatcatggccagcggactacagcccacaacgcatgctatcccagctctgcgc
tgcgtggtgtacgacctgttcctgctccgtggcaatagcaagtcggatgtagggaaggag
ctggagacgcagagggaggtggtggtgtccatgctgctgcgcctcatcaactactaccag
gcgctggagatgtttgtgatagttcttcagcagtgccacagagagagtgaggacaagtgg
aagcgtctatctcgacaagtcatcgacactgtgctgccagctctagccaaacaacagatc
aacattgaccgacaggcttcgctggacgtcctgcaccggttgtttgagtcagtagcgccc
agtgtcttcagaccagtcgacatcctgctgaaggggctgctcggatccccaggggacatt
tcatgtgtccagggcctgcagcgctggatgtgtctcgtactgtccgtcatgagagtgctg
gtctcccagtctaaggaggaggtggtgttgtcccgcctcgtggacgtggggctgtcgttc
cccctgacgcgggacgccggggagagagacactaacattgaggactacagcgatctgatc
ccagaggagatatttgcatggttcctgttgcaagcaataggcaagtgtgcagaaaccctg
aacaaggaatctgtgaccatccactcctccgacaacaacctgcactttctggtccagcag
atgtgccacctcatcctgtacatcacacacatgttccagtccgggctgtaccgccgcgtt
gccacggcagccatgcgcatcatgcagatggactgtcctcgcaacgtgtacagtgtgcgc
gagatcaaccagctgctgctggcgctcaacactgtgtacccaacactgacgatgctgtgg
tgcaacgtcctcatcctcctcaactttgacgaccagagcatgtggagccaggtgatgcac
acgccacagaagtacctcatggtcagccctagtcgccagggcaacatggtggacctaaag
aagcggacgctgcagtgttgtcagctggagctgctgagacggggtggactcatcctcttc
tgtgactacgtgtgtgagaacctaaatgatgcagagcacatgacatggctgatcataaac
cacgtgtctgatctgattgagctttctgatgagtcaccagtgcaggatttcatcagcgcc
atacatcgcaactcggccgccagcagcctcttcatacaagccatacatgcaagatgtgaa
aatgtctccaggccctctcttgtgaagaagaccctgaaatgcatagaagcaatccatctg
acgcagagtggggcgttactgacgcttctgatagacaagtttctcaacacacatcagctg
gctgtcgcaaggatgtgcgacactatcgcatgtcgccgagttgagatgttgctcgcggag
aactatgaggacagcagcaagcagttaccacttgaggatttagagaagttactgcagttt
atgagatccaatggattaatacagagacatgcccgccttgtctccctcctcaacaagttc
ctcatcctccaatctccggacaacaaacatgccaagtcaccagagaaaactcaccctctg
gccttgacccctgaacaggtcacaaatattgaggtcaacaaggacttctacctgtcggtg
gtgaaggaccagtgcttccagatggaccccaacacaagggagtgtgccttcctcctccag
cgcctggactacgctgacattctgtctatcaccatgacaaaggagttcagtctggcagtg
ttagaggagtgtatatcgctgggcgcgtaccgaacacttgtgagatacaatcgtgaccga
gagactcacactgagcagaagctgcctccctcagagccgagtctagacacactcttccag
gcagctcagctcactctgttccgccatattaacaatataatcaatcaccttccaattccg
catcaaaacctgaattttagactctctctcagtgccaaagagattcgatacatggagaga
attgaggatttgtttacggatagtacatggtttgtgatgaattttcaactgacgtcagcg
ttgacgcaatatttagtgtctgtacagaggtttccatggaaaccaggtgtgccagcagaa
tctcatggggatgtgtgccgctttagtgttctttgtatggagatgttgagttggctgctc
cagcacaaccagctgccgaccacggagcagatacaaacatgtctggagtgtgtgtccctc
gtcctgcagaaccaagtcttctcctccgtcattggtcagactgatcactccacgtgggtg
tgcaccatcacgtccgcactgtaccagcttatgtcatctttggtggtgctaccaggggag
aaggtggctgtgttggctcaccaggaccgagaggatgacagcatgatgcattccagagat
gagtctacctacctgatccgtgcttgtgaccagatctcggagttggttcactgtctacag
actcgcctgaaaccaaagacccagactagtctccccctgcccccagtcatagcagctccg
atcaggaacatcgtcattggtcttggtcggctccagctcgtcaacacatacgctagaaca
ccgccacttgtatggaagctgggctgggctccctccccctcaggagatctgaagacgaaa
ctacctccattacctgtggactttctacaggagaaagaagtcttgagggaatttgttttg
cgggtcaacacgctgggctgggtgagtcggcagcagtttgaggagacgtggatgagtctg
ctagcactactcaaccctgtgtcagggggcatggatctaacgcatgaggaggaggtggat
cgcagccaggtgatggtgatctcggtgaaggccatcacggccctccttctgcagtccatc
ctcatcccatttgctggcaaccctggcaacagcatgttcgaggtccagcccagggacaag
cctctggccttcctgcatacacggtgtggcaagaaactgtcaatgatccggggtctgata
gagcaagagatccagaatctgtgtgctgccagaccagatcggcagtctcaccatgcgtat
gctggttaccgtcgacggacagactctctacactgtgatctatttgaggacaatctggaa
cgtgagacagggatggaagactttggtcaaggacagatctccctggaagctatctggtca
gtggttgggacacttgaaaccaacatgtccgagtccgacacaacggactccatggacagt
ccgctccaggagcaggtgcgagccaacattccactgtctcccatcaagtcccaggagaga
tccatcacgctgagcggcctggacatccactcctgcctccagttcctgctggagctgtac
acaccctggctggcctgtgactccaactccaggccacctctcatgctcatcaacgcagtt
gtggagtcgatcgtgtgtctgtctgacctgttcatggagcgggagcagtttgaactgatg
ctggacacactgctggatgtccacaagacacacccctcggaggatgagctggtcacccag
tatctcaatgtcggcatctgtaaagctgttgctgtggtcggtgcagatagctctgtagct
gagagagttgtgaagcttattgatgtgggtctgaagagcacacacctccccagcaaagtc
tccacgttacatggcatgctttatttattagaggctaacattgctgatctcaccaagagt
attctccctttagtcacagacttcctgctcaagcacctgtcggcagtcagcaatgcctgc
atcacaagtcaacagtttgaactgacaatgtgggccgtcgcattctacgtgctggagaac
taccacgacgacctccgtgatgcagagttcccaagcaaaatgcttacgcttgctgtgagc
acagcgtcggggagtgaggacagtgtctcgactgccgtgttcctcacgatcatgaagggg
acagaacgcctcctgttgacggacgtcctctctcggggcgacatggagaccattatgaag
ttgagcatggacaggctgtgtctgccgagtccacagagggcgctggcagcactggggctg
atgttcacctgtatgtactctggcaagcagtttgatcagtacagcccccgtcctcgtgac
gagatggagccaatattctcagacaacggcttctccttcgtgtaccaggacccagaatct
ctcatcctggccatggagagggttacagtactgtttgacagaataaagaaaggctaccca
tacgaggcccgggtgattacgcgtctcctcccagcattcctagccgacttcttcccacca
caagacatcatgaacaaagtgatcggggagttcctctccagccaacaaccctacccacag
ctcattgccaaagtcgtctttcaggtattcaacaacttgcatcagcagaaccagcagagt
ctagtgagggactgggtgatgttgtcgctctccaacttcactcagcgatcacctgttgcc
atggcaatgtggagtctcacctgtttcttcataagtgcctccaccaatcagtggctcaaa
gcattatttccacatgtgattggtcggatgggtaagatggagacgatagacaggaagttg
ttctgtctttcagccctggactttaaaagtcagctgaccgaggacctccacgtgttcgtg
tcgacattccaggctgtggcacagcccgactccccttaccaggatcttgtcaactgcctc
acatag
DBGET
integrated database retrieval system
