Haliotis cracherodii (black abalone): 139452798
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Entry
139452798 CDS
T10814
Name
(RefSeq) ATP-dependent RNA helicase DHX58-like isoform X1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
hcra Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hcra04054
]
139452798
Enzymes [BR:
hcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139452798
Pattern recognition receptors [BR:
hcra04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
139452798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
DEAD
CARD_2
RIG-I_C
ResIII
Helicase_C
CARD
AAA_22
Yippee-Mis18
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
139452798
NCBI-ProteinID:
XP_071090514
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MAAAAAAAVPEDLKKKEPTLEDQVFMIEIMMDTFEKYLDPSLIIDNIDLPKVVKEEIEGL
QNNGKRSKAAKKLVKAILKDPQERVPFFLQELRHVDFRHFINILDDRAENKDMEKSEKYE
LLLKLMQGELVKKIIPSEIVTHLDSILNSGDDEEILAIEERRGPNHACRHMFRCMDRKDP
HWPVKFMEALYNNNRRLHAKLDPERHDDNESGSDDDDNDDGDDDDDSSVVTGAESLASSD
SQTYPKDVDVTPVEMSREDRLRDLESMLDPPSDGPPHSHAASEPSNHDGSAPEFSDEEKQ
DDEDDEKDSADTAKDDPLDLNLRRYQLELAENAVKCRNTIICAPTGSGKTRVALYIVKDH
LEKQDEAEADVHVPGRKRVVFLARTVPLVNQQYGTFQRFFGHDYRIFKLSGEDESSMYLH
QLLDLYDIFVMTPQILENQLRDAKIKSLSVFSLIVLDECHHTRKGEPYNKLMIRYLKQKN
KKKSIRLPQIVGLTASLGVEKATVDEEAIDSILKLCANMDAPYLSTVQTHIDELKEKVPV
PDEKTYPLTEDRKDPARKELETAMQKIEDLMIEINDLNDKAIDNLLMKRPSNRNSQPYGQ
WAVQMKNESRLVHTGRRDGLFTVDVDPKRAEMARSLFVMADHIFKYNAALEIHDIVRIKD
VVDYLQKEFSHGCHSTQLPGGGSVHVPCEEKLDEIFSGLKKKLIRYEQKRRDDPKYDNPN
LKVLAKTLTGMLDSKGSDSRAIIFVRTRATCYALTNWLNEDDKIEPQLKDLKAMAFTGAG
ANEEEGGMTQNEQDKVISKFKSGQVKLIVATSVAEEGLDIPECNIVVKYNHVGNEITTLQ
TRGRSRKAGGTSILLGGSKVQQKEMLNVARASMMQRAITTIRGMPMDRVKRRIDNNQAET
LAKEAIKEEVRRHQTRQKLDTKFTLMCACCRKLCAHSKDLRIINGSQHVVIGRDFEDRIN
THQFRNQKKPFDGITMTGSMQCRNCHKPWGVKFIYQGVAFPSLGIKYFIVINEETKQPQY
YKKWLELPYQIQDISAEDFKTLLGSENVSSSDEDDDYDDDEFDLC
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgctgctgctgctgctgttcctgaagatttgaagaagaaggaaccaacactg
gaggatcaagttttcatgatagagatcatgatggacacatttgagaaatatcttgatcca
tcacttatcatcgataacattgatttaccaaaagtcgtaaaagaagaaattgaaggtcta
caaaataatggaaagaggtcaaaagctgcaaagaaattggtgaaggcaattttgaaggac
ccccaggaacgagtgccattctttctacaggaactgagacatgttgattttcggcacttt
atcaacattctcgatgatcgggctgaaaataaagacatggaaaagtctgaaaagtatgag
ctcttgctgaaactgatgcaaggcgaattggtgaaaaaaataatcccatcagaaatagtt
acgcaccttgattcaatactcaacagtggagatgatgaggagatacttgcaatagaggag
agaagagggccaaatcatgcatgccgtcacatgtttcgatgcatggacaggaaagatcca
cactggccagttaagttcatggaagctttgtacaacaacaaccgaagactgcatgccaaa
ctagacccggaaagacatgatgacaatgagtctggtagtgatgatgatgacaatgatgat
ggtgatgatgatgatgattcctcagtagtcactggagcagaaagcctggcgtcatcagac
tcacaaacttatcctaaagatgttgatgtaacccctgtggagatgtcccgagaagatcgg
ttgcgagatcttgaaagcatgctggatcctccctcagatggtccgccacacagtcatgct
gcaagtgagccatcaaatcacgacggcagtgccccagagttctctgatgaagaaaaacaa
gatgatgaggatgatgagaaagactcagctgatacagccaaggatgatccactagatctc
aacctccgccgataccagctggagttggctgagaatgcagtaaaatgccgtaacaccatc
atttgtgcccctaccggttcaggcaagacaagagtggcactctacatcgtcaaagaccat
cttgaaaagcaggatgaagctgaagctgatgtgcatgttccagggcgaaagagggtggtg
tttctggcacggactgttcctctggtaaatcagcagtatggtaccttccaaagattcttt
ggacatgattacaggatattcaagctgagtggtgaggatgagagcagcatgtacctccac
caattgctggacctgtacgacatctttgtgatgacaccacagattctggagaaccaactg
agggatgcaaagatcaagtccctgtctgtgttcagccttattgtgctggatgagtgtcac
cacacacggaaaggggagccctacaacaagctcatgatcagatatctcaagcagaaaaac
aaaaagaaatccattcgcctaccgcagattgtaggcctgacagcctccttgggagtagag
aaggcaacggttgatgaggaggccattgacagtatcctgaaactgtgtgccaacatggat
gccccctatctctccacagtacagacacacatagatgaactcaaagaaaaggtccccgtg
ccagatgaaaagacttatccgctgactgaggaccgaaaagacccagcacggaaagagttg
gagacagccatgcagaagatagaggaccttatgattgaaattaatgatctgaacgataaa
gcaattgacaatttgctgatgaagcgtcccagcaaccggaacagccagccgtacggccag
tgggcagtccagatgaagaatgaatccagacttgttcatacaggccgcagggatggtctg
tttactgtagatgttgaccctaagagagcagaaatggccaggagtctatttgtcatggca
gatcatatctttaaatacaatgcagccttggaaattcatgatattgtaaggatcaaggat
gtggtggattacctccagaaggaattcagtcatggttgccacagcacccagttacctggt
ggtggcagtgtgcatgtaccttgtgaagaaaagctggatgagatcttcagtggtttgaaa
aagaaactgatccgttatgaacagaaaaggagagatgatcccaagtatgacaaccccaat
ttgaaagtgttagctaaaacactgacaggcatgctggattcaaaaggcagcgactcccga
gccatcatatttgtgagaaccagggccacctgctacgctctgaccaactggctgaacgaa
gacgacaagattgaaccccagctgaaggatctgaaagccatggcgttcactggtgctgga
gcaaatgaggaggaaggaggtatgacacagaatgaacaagataaagtgatttccaagttc
aaaagtggtcaggtcaagttaattgtcgccacatcagtagcggaggaagggctggatatc
ccagaatgcaacattgtcgtgaagtacaaccatgtcggcaatgagatcacaactctccag
acccgaggaagaagcaggaaggcaggagggacatctattcttttgggtggcagcaaagtc
cagcagaaagagatgttgaatgttgctcgggcaagcatgatgcaacgagccattaccacc
atcagaggtatgccaatggatcgagtcaaacgccggattgacaataatcaggctgaaact
cttgccaaagaggcaataaaggaagaggttcgacgccatcagactagacagaagctggat
acaaaattcacactaatgtgtgcttgctgcagaaagctgtgtgcacacagcaaagatctc
aggatcattaatgggagccaacatgttgtcatcggccgtgactttgaagatcggatcaac
acccatcagtttaggaaccagaagaaaccgtttgatggaatcacaatgacgggcagcatg
cagtgtcgaaactgccataagccatggggggtgaagttcatctaccaaggtgtggctttc
ccctccctgggtatcaagtacttcattgtcatcaacgaggagacaaaacagccacagtac
tacaagaaatggttggagcttccataccaaatccaggacatttcagcagaggatttcaag
acacttttgggaagtgaaaatgtttccagctctgatgaagatgatgattatgatgatgat
gaatttgatctttgctga
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integrated database retrieval system
