Haliotis cracherodii (black abalone): 139454059
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Entry
139454059 CDS
T10814
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra04137
Mitophagy - animal
hcra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139454059
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139454059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcra04121
]
139454059
Enzymes [BR:
hcra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
139454059
Ubiquitin system [BR:
hcra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139454059
Multi subunit type E3
ERAD complex
139454059
LMBR1L-GP78-UBAC2 complex
139454059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
G2BR
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-RING_Vps41
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
139454059
NCBI-ProteinID:
XP_071091650
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MPAILLERIPLPSLQTYTAFSTVLLACALFYTHQTVTSTPFESLEQEVDAPIKTEVPVTE
NLSEDDPEIVISDPWNTTLPYDSYEWNFLFVMTTQAWCVWTLVNTAYCCLILLGKLIQRM
VFGELRVSEQQHLKDKFWNFVFYKFIFIFGVMNVQTMEEVVLWVAWFSVLGFFHLLTQLC
KDRFEYLSFSPTTARYSHVKLLSLLWVILVSCGGLLLVCVYVGLQVGLTILAFMAAECLL
LGIRALYVVVRYIIHLWDMSKEGVWENRSMYVYYAELIFELAALSIDFCHHLHMLLWGNI
FLSMASLVICMQLRYLFYEFQRRVKRHKNYLRVVKNMEARFPMATQEDLEQNNDDCAICW
ERMESARKLPCCHLFHNSCLRSWLEQDTSCPTCRMPLSDGQRERQNVPQGGPAETGNAGA
PPAPPANAATTNHFFHFDASRYVSWLPSFSVEVTHTNLLTGQQQARVSPTSQLDNMARQV
QAVFPNMPLATIVDDLGATRSVNLTIDNILEGRLVAPPTPVLSNRPSVDNDTDDEQNMQQ
IAVPSTVSRTGLMGLRAALGDTHLSVGDNTDSQPGPLLAQAEAMVINSGDFRHSEDVPSP
LGGRFSKSASERMSMLEHRKTSMVDQARRKYLQKNKHNTESGDFSSSSQSDQSDDSRSQQ
REVIFQAAQRRLNSIHHSQYS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccggccatcttactggagaggattcctctgcccagcctgcagacatacacagctttc
agtacagttctgctggcatgtgccctcttctacacacatcagacagtcacttccactcca
ttcgaaagtctggaacaggaggttgatgcgccgatcaagacagaggtcccagtaacggag
aacctaagtgaagatgaccccgagatcgtgatatctgacccgtggaacaccacactaccc
tacgactcctacgagtggaatttcctgtttgtcatgacgactcaggcatggtgtgtttgg
acactggtaaatacagcctactgctgtctgatcctccttggcaagctgatacagcgcatg
gtgtttggagagctccgagtcagtgaacaacagcatctgaaggacaagttctggaacttt
gtgttctacaagttcatcttcatctttggtgtgatgaatgttcagactatggaggaggtg
gtgctgtgggtggcctggttctctgtccttggcttcttccatctcctcacacagctctgc
aaggacaggtttgaatacttgtccttctccccgaccacagcccggtactcccacgtgaag
ctcctcagtctgctgtgggtgatcctggtgtcgtgtgggggcctgctccttgtgtgtgtc
tatgtgggacttcaagtcggcctcactatactggccttcatggcagcggagtgtttactg
cttggaatcagggctctgtatgttgttgtgaggtacatcatccacctgtgggacatgagc
aaggagggtgtgtgggagaaccgatccatgtacgtgtactatgccgagctcatctttgaa
ttggccgccctctccatcgacttctgtcatcacttacacatgctgctgtggggcaacatc
ttcctgagcatggcgagtctggtgatctgcatgcagctccgctacctcttctacgagttc
cagagacgggtcaagagacacaagaactacctccgagtggtcaagaacatggaggccaga
ttccccatggcaacacaggaagacctggagcagaacaatgacgactgcgccatctgctgg
gagaggatggagtcggccaggaagctgccctgctgccacctgttccacaattcctgttta
cgatcatggctggaacaagacacatcttgtccaacttgtcgcatgccactgagtgacggt
caacgcgagagacagaacgtgccacaagggggacctgctgaaacagggaatgctggggcg
ccaccagcgccacctgccaacgcggcaaccactaaccacttctttcatttcgatgcttct
cgctatgtgagctggctgccgagtttctccgtggaggtgacgcacactaacctgttgaca
ggacaacaacaagcacgggtatcccccacctcccaactagataacatggcaagacaggtg
caggcagtttttcctaacatgccgctggctaccattgtggatgatctgggagctactcgg
tctgtgaacctgacaatagacaacattctagagggaagacttgtagcaccaccaacacca
gtactttccaacagacccagtgtagacaatgacacagatgatgaacagaatatgcagcag
atagcagtgccatctacagtgtctcggactgggctcatgggcttgagggctgcattgggt
gacacccacctgtcagtgggagataacactgacagtcagccaggccccctgttggctcag
gctgaggccatggtcataaactcaggggactttagacacagtgaggatgttccttcaccc
cttggaggaaggttttcgaaatctgcatctgagagaatgtcaatgttagaacacagaaag
acatccatggttgatcaagccagaaggaaatatcttcagaagaacaaacataatacagaa
tctggcgatttttcatcatcgtctcaatctgatcagtcggatgactcaaggtcacaacag
cgcgaggtgatatttcaggcagcccagcgcagactgaactctatacaccactctcagtac
agctga
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