Haliotis cracherodii (black abalone): 139454198
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Entry
139454198 CDS
T10814
Name
(RefSeq) vacuolar protein sorting-associated protein 35-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139454198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcra04131
]
139454198
Membrane trafficking [BR:
hcra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
139454198
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
139454198
NCBI-ProteinID:
XP_071091867
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MILSRSRDTTIPSTPQLSPQEEQEKLLEEATNVVKNQAFQMIRCLDKGKLMDGLKHASSM
LGELRTSMLSPKSYYECYMAISDELRHLEGYLVEEFQRGRKVADLYELVQYAGNIVPRLY
LLITVGVVYIKANELSRRDILKDLVEMCRGVQHPLRGLFLRNYLLQCTKNVLPDTEEDAS
SGEHESGTVDDSIDFILLNFAEMNKLWVRMQHQGHSRDRERREQERRELRILVGTNLVRL
SQLECIHVDKYKKHVLPGVLEQIVNCRDPIAQEYLMECIIQVFPDEFHLQTLNHFLRACA
DLHNSVNVKNIIIALIDRLAAFAQNEEGSGIPADIQLFDIFSQQIAQVIQNRPEMPPEDI
VALQVALINLALKCYPDKVDYVDKVLETTEEIFHRLNLDHLEHGTPVSKELMRLMKIPVD
QYNNLLTVLELQHYGPMFEYFDYKGRKIMSCYIINNALENDIKIPLQENVDAILNIVNCL
VQDQPDQPEEPDDPEDFAEEQGLMGRFIHLLDSEDPNQQFLILNTARKHFGSGGDKRIKF
TLPPIVFAAYRLAFKYCTLKDEDENWEKKCQKIFQFCHQTIGALLKAEQAEIPLRLFLQG
ALAAGQIEFDNYETVAYEFMSQAFSLYEDEISDSKAQLAAISLIIGTLEQMSCFGEENHE
PLRTQCALAASKLLKKPDQCRGVSTCSHLFWSGKSAANQGEMQDGKRVSDCLKKGVKIAN
QCMDSSVQVQLFVELLNHYIYFFEKGCDQISVQVLNQIISKIREYLPNLEANEETEQINK
HFNNTLEHLQLRAERKDTEQPYEGLVL
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgatactgtcacgctcccgagataccacaattccgtcaacaccacagttgtctccgcag
gaggagcaggagaagctcctggaggaagccacaaatgttgtcaagaatcaggccttccag
atgatccgctgtcttgacaagggcaaactgatggatggcctaaagcatgcttcatcaatg
ctaggagaactcaggacatccatgttgtcaccaaagagctattacgaatgttacatggcc
atttctgatgaactccgtcatctggaggggtatctggtggaggagtttcagcgaggacgc
aaggttgccgacttgtatgagctggttcagtatgcagggaacattgttccccgattgtat
ctgctgattactgttggagtggtgtatattaaagcaaatgaattatccagacgagacatt
ttaaaggatctagtagaaatgtgtcgtggtgtgcagcatcccttgagaggactttttctg
cgcaactatctactgcagtgtaccaaaaatgtcttgcctgacactgaggaggatgcaagt
tctggagaacatgaaagtggaactgttgatgattctattgacttcatcttgctcaacttt
gctgagatgaacaaactatgggtacgaatgcaacaccagggccattctcgcgaccgtgag
cgtagggagcaggaaaggagggagttgcggatcctggtgggaacaaatctggttcgtctc
agtcagctggagtgtattcatgtggataaatataaaaagcatgtgttgcctggagttctg
gagcaaatagtcaactgccgtgatcctattgctcaggagtacctaatggagtgcatcatt
caggtgttccctgatgagttccacctacaaactctgaatcacttcttgagagcatgtgct
gacctacataacagtgtcaacgtcaagaatatcatcatagctctgatcgacagacttgct
gcatttgcacagaatgaggaaggaagtggaataccagccgacatccagttgtttgatatc
ttttcccaacagattgcacaggtgattcagaatcgccctgaaatgccgcctgaggacata
gtagctttgcaagttgcactgatcaacttggcactgaaatgctacccagacaaggtagac
tatgtagacaaggtgctggagacaacagaagagatcttccacaggctcaacttggaccat
ctggagcatggaaccccagtgtcaaaagagctgatgagactaatgaagattccagtggac
caatacaacaacctgctcacagtgctagagcttcaacactatggacccatgtttgagtac
tttgactacaaaggtcgaaagataatgagctgctacattatcaacaatgccctggaaaat
gatattaaaataccactgcaggaaaatgttgatgctattttgaatatagtcaactgtctg
gtccaagatcagcctgatcaaccagaagagccagatgaccctgaagactttgctgaagaa
caaggccttatgggcaggtttattcatttgctggactcagaagatccaaatcagcaattt
ttgatcctcaacactgcccggaagcactttggcagtggaggtgacaagagaatcaagttt
acgttaccaccaattgtctttgctgcatatcgattagccttcaaatattgcacactcaag
gatgaggatgagaactgggaaaagaagtgtcaaaagatcttccagttttgtcatcaaaca
atcggggccctgcttaaagctgaacaggctgagattcccctcaggctttttctacagggt
gccttagctgccggtcagattgagtttgacaactatgaaactgtggcctatgagtttatg
tctcaggcattttccctgtatgaggatgaaatcagtgacagcaaggcacagttggctgcc
atctccctcatcattggtacattggaacagatgtcttgttttggcgaggagaatcacgaa
ccactccgaacacagtgtgcactggcagcatctaaactcttgaagaaaccagaccagtgt
cggggtgtttcaacttgttcccatctcttctggtcaggaaaatctgcagcaaatcaaggg
gagatgcaggatgggaaaagagtgtctgactgcctgaagaagggggtaaagattgcaaat
cagtgcatggacagctctgtacaagttcagttgtttgttgagctactaaatcactacatc
tacttctttgagaaaggctgtgatcaaatatctgttcaagtcttgaatcagatcatttct
aaaataagggaatatcttccaaaccttgaagcaaatgaagagacagaacaaatcaataag
cattttaacaacactctggagcatctgcagctcagagcagagagaaaagacacagaacag
ccgtatgagggtttggttctgtaa
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