Haliotis cracherodii (black abalone): 139454590
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Entry
139454590 CDS
T10814
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16-like
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03040
Spliceosome
Brite
Enzymes [BR:
hcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139454590
Spliceosome [BR:
hcra03041
]
Complex C
Other components
Step II factors
139454590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139454590
NCBI-ProteinID:
XP_071092501
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Position
Unknown
AA seq
1272 aa
AA seq
DB search
MANFESDEDPSLHCLEGSSGLQKGGLVIMKKGQSNKNPHMFKKPTGSVLGLDKLAAAKRT
QNSDVPMSPKRSKVMSYKDDEYDDIEDDENYSSSITDKKHGKERHYRSAQVETPSHPGGV
SREAKERMRQHHKERERGVYVSSNDKESRDKERHRHKRRDRDRRDRHSERSSRKHDDSQR
RGRRYKDWEETPEHSYRNKDEIATPDIRVKDTPSRSNWDDDDVTPLKRSAWDLPTPSQSE
LDRDSSERSFKSSRDWDRSERGRDWDRSERGRDWDRSERGRTWDRSERGQDWDKSERSGG
RPDRSGRSDKRKMRKYVDDTPRATPTYKYNEWMDDKKKIQFTPKDSKGGKRDMEFGDEQS
QEEWEEEQRRLDREWYGMDEGYDDDHNPFSGTSAEYTKKKEEEMEQRKKKRMSARQRQIN
KDIEMWETNRMLRSGVVAKTNYDEDFEEDNVARVHLLVHNIVPPFLDGRIVFTKQPEPVV
PVKDPTSDMAQVSRKGSQVVRAHREQKERRKAQVKHWELAGTRMGDIMGIKKKEEEDETE
EKDFKQDHKFADLMQEKTEAVSEFAQRRTIQQQRKYLPIFAIRNELLNVIRDNSIIIIVG
ETGSGKTTQLTQYLHEDGYTKFGMVGCTQPRRVAAMSVAKRVSEELGVKLGDEVGYAIRF
EDCTSEKTMIKYMTDGILLRESLRESDLDNYSAVIMDEAHERSLNTDVLFGLLREVVARR
NDLKLIVTSATMDASKFASFFGNVPIFTIPGRTFPVDIMYSKNPVEDYVDASVKQALQVH
LQGMQGDMLIFMPGQEDIEVTCELISERLGELDEAPPLAILPIYSQLPSDLQAKIFQKAP
DGVRKCVVATNIAETSLTVDGIMFVIDAGYCKLKVFNPKIGMDALQIFPISQANANQRSG
RAGRTGPGQCYRLYTARQYKDEMLKTTVPEIQRTNLANVVLLLKSLGVQDLLQFHFMDPP
PQDNILNSMYQLWILGALDNTGALTPMGRSMVEFPLDPALSKMVIVSLEMECSAEILTIV
SMLSVPAIFYRPKGREEDSDAAREKFQVPESDHLTYLNVYQQWKRNGYSASWANEHFIHI
KAMRKVREVRQQLKEIMDQQKMEMISCGNEWDIIRKCICSAYFHQAARLKGLGEYVNCRT
GMPCHLHPTSALFGMGYTPDYIVYHELVMTSKEYMQCVTSVDGEWLAELGPMFYSIKDAS
KTRQERKKLAEEELVAMEEEMKRAEELIKARKEQQDQSAASVRKPSIATPGRKDESSPYT
ATPRRTPAKFGL
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactttgaatctgatgaagatccgtcacttcattgcttggagggcagttcagga
ttacagaaaggtggacttgttatcatgaagaagggacaatcaaacaaaaacccacatatg
ttcaagaaaccaacagggtcagtgcttggactggataaactggctgcagctaaacgtact
cagaacagtgacgtaccaatgtctccaaagagatccaaggtcatgtcatacaaagatgat
gagtatgatgacattgaagatgatgaaaattattctagcagcatcacagataagaagcat
gggaaggagaggcactacaggtcagctcaggtagagactccatctcacccaggtggggtg
agtcgagaagccaaggagaggatgaggcagcatcataaagaacgagagaggggagtctat
gtgtcctccaacgacaaggagagtcgagataaggagagacacagacacaaacggagagac
agagataggagagaccgccacagtgaaagaagttccaggaagcacgatgactctcagaga
agaggccggaggtacaaggactgggaggagaccccagaacacagctacaggaacaaagac
gagattgccacaccagatatacgagtgaaagacacaccgtcgaggtccaactgggatgat
gatgatgtcacccctctgaagcggtcagcgtgggatcttcccacaccgtctcagtccgag
ctggacagggattcaagtgagagaagcttcaagtcaagtcgtgactgggacaggtccgag
aggggacgtgactgggacaggtccgagaggggtcgcgactgggacaggtctgagaggggt
cgcacctgggacaggtccgagagaggtcaggattgggacaagtccgagaggagtggaggt
cggcctgatcgatcaggacgttcagacaagagaaagatgaggaagtatgtggacgacact
cccagagccactcccacttacaagtacaatgagtggatggatgataagaagaagatacag
ttcactcctaaagactccaagggaggcaagcgggacatggagtttggcgatgaacagagt
caggaggaatgggaggaagagcagcgccgcctggaccgggagtggtacggaatggacgag
gggtacgatgacgaccacaaccccttctccggcacctctgctgagtacactaagaagaag
gaggaagaaatggagcagaggaagaagaagaggatgtccgcccggcagcgacagatcaat
aaggatattgagatgtgggagaccaaccgcatgttgcgtagtggtgtcgtggcgaagacc
aactacgacgaggactttgaggaagacaacgtagctcgcgtacacttgttggttcataat
atagtccccccattcctggatggacgtatagtgttcacaaaacaacccgaacccgtcgtc
cctgtcaaggatcccacgtccgatatggcgcaggtttcacggaagggcagtcaggtagtg
cgggcgcaccgagaacagaaagaacggcggaaggcgcaggttaagcactgggagttggcc
ggcaccaggatgggcgacattatgggcatcaagaagaaggaggaggaggatgagacggag
gagaaagacttcaaacaggaccacaagtttgccgacctgatgcaggagaagacagaggct
gtgagtgagttcgctcagcgccgcaccatccaacagcagaggaagtacctccctatattt
gccatcaggaacgagctgctgaatgtgatccgagacaacagcatcattatcattgttggg
gagacaggctctgggaagaccacccagcttacacagtatctccacgaggatggctacacc
aagttcgggatggttggctgcactcagcccaggagggtggcggccatgtcagttgctaaa
cgagtctcggaggaactgggcgtcaaactcggggatgaggttggatatgccatccgtttt
gaagattgcacttccgagaaaacaatgatcaagtacatgactgatggtatcctgctgcga
gagtcgctccgggagtccgacctggataactacagtgcggtcatcatggacgaagctcac
gagcgatccctcaacacagacgtgctgtttggcttactcagggaggtggtcgccagacgc
aatgatctcaagctgattgttacatcagccacaatggatgccagtaaatttgcaagtttc
tttgggaacgttccaatcttcaccatacctggtcggacgttccccgtggacatcatgtac
agcaagaacccagtggaggactacgtggatgcctcggtgaaacaggccctgcaagtgcac
ctacagggcatgcaaggtgatatgcttatcttcatgccgggccaggaagacatcgaagtg
acgtgcgagcttatctcagagagactaggagagctggatgaggcaccgcccctggccatc
ctccccatctactcccagctgccgagtgacctgcaggccaaaatcttccagaaagctcct
gacggtgtccgcaagtgcgtcgtggcaaccaacattgctgaaacttctctgacagttgat
ggtattatgtttgtcattgatgccggctactgcaagttgaaagtctttaatccgaagatt
ggaatggatgctctgcagatcttccccatcagccaggccaacgcaaaccagagatcaggt
agagccggaagaacggggccaggacagtgctacaggttgtacacagcccggcaatacaag
gacgaaatgttgaagacaaccgttccagaaatccagcggaccaacctggctaatgtcgtt
ctgttgctgaagtcactgggagttcaagacctgctacagttccacttcatggacccaccc
ccacaggacaacatcttgaactcgatgtaccagctgtggatcctgggtgccctggacaac
accggggccctgacgcccatggggcgcagcatggtggagttccccctggaccccgccctc
tccaagatggtcatcgtctccctggagatggagtgcagcgccgagatcctgaccatcgtg
tccatgttgtcggtgccagccatcttctaccgccctaaagggagagaggaggactcggat
gctgccagagagaagttccaggttcccgagagcgatcatctcacatacctcaacgtgtac
cagcagtggaagcggaatgggtactctgcatcctgggccaatgaacatttcattcacatc
aaagccatgaggaaggtgcgcgaggtccggcagcagctgaaggagatcatggaccagcag
aagatggagatgatatcttgtggtaacgagtgggacatcatcagaaagtgcatctgttcc
gcatacttccaccaggctgccaggctcaagggtctgggggagtatgtcaattgccgtaca
ggcatgccctgccacctgcaccccaccagcgccctgttcggcatgggctacacacctgac
tacatcgtctaccacgaactggtcatgacgtcaaaggagtacatgcagtgtgtgacgtca
gtggatggagagtggctggcagagcttggaccaatgttctacagcatcaaggacgcctcc
aaaacaagacaggagagaaagaaactggcggaggaggaattggttgcaatggaggaggag
atgaaacgagcggaggaacttatcaaggccagaaaggagcagcaggaccagtcggcagct
tcagtgaggaagccatcaatcgcgacaccaggacggaaagatgaaagttcgccctacacc
gccacgcctcggagaaccccggccaagtttggcctgtga
DBGET
integrated database retrieval system
