Haliotis cracherodii (black abalone): 139456348
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Entry
139456348 CDS
T10814
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03040
Spliceosome
Brite
Enzymes [BR:
hcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139456348
Spliceosome [BR:
hcra03041
]
Complex C
Other components
Step II factors
139456348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_DEAH11
Helicase_C
IBR
OB_NTP_bind
IBR_1
DEAD
RRM_1
AAA_22
IBR_2
HA2_N
RRM_DEAH11
nSTAND3
KH_DEAH11_1st
RBD_DEAH11
AAA_19
AAA_30
Helicase_RecD
ABC_tran
KH_DEAH11_2nd
RRM_Nup35
AAA_16
BRK
Motif
Other DBs
NCBI-GeneID:
139456348
NCBI-ProteinID:
XP_071094096
LinkDB
All DBs
Position
Unknown
AA seq
1937 aa
AA seq
DB search
MSGRSSGLNLVNEAMMKEVDQLSRSKPVAALETLGANKMAAIPSVSNEGEDLLSQASVTE
APPTDDNVQEVIKTQIYVRSDLPGVSVMSETVTDGRIRDDEGAGSNRNSSKPVPKPRRTL
RQNEPKEDESGASKERNDDPTEDNSSRLGLAGTNNQGTATDMGRQYTYGRPKGGVYTGKG
GKERRRSQTETRDNGQDTKGGKSSWTKQGISSESPEQIPHDRRGSVTRTRKDNLSEGTHN
KGVSQDKENKLNDNQKGERRRAPKKKKPRDELEGFLRNNVGKQTPVILYVRIGQLLDQKY
DVKGFLCARMQIEQDDQSKKFIVVKSEHVGSNTVISVEAPSKSVANKIGNLLKLSNRGSE
TKLVCTLDRNEALDLPTKRDEREFEKHLTIIKRRENQALSNHMDKISVTSKNIERLSSNK
HVTIDEYEAKQYEKDALKDKLEELKLQKEQFTTFMKSFVSKLVSLWKNNTYAKHIEDLRR
DFGVELCRLTSALPMYARRNDIIRTVQDNQVCVILGETGSGKSTQMTQYLHQAGFSKDGF
IVCTQPRKVAAISLATHVASELVTNVGNVVGYKVGMRSKCGGATKILYMTDHCLLNECLK
DPTLSAYSCVIVDEAHERSIYTDLLLGMLKMCLKQRPNLRAIITSATIDPEVFVRYFGEC
PVLRVSGRMFPVEVEYQTENDGGKSFDNYQREAVNKAVQVHTKDPPGDILVFVTSPLETE
KCSEDFNKRLQGRTDFKCLVLHGQIQPDEQQLVFQNTPSGVRKIVFATNSAETSITIPGI
KYVIDTGLAKEKRYDPRRNMSTLSVVLISRSSADQRKGRAGRTGPGKCYRLYSEETYQEM
EAVSLPELLKVHLGQAMLKLTELGINPLEYEFVQSPGPSAIATAMTTLEELGAVKDNKIT
EEGKELARLPVEPRLGLIIQKGRSEDVLFDAVVLAAVSNVGSSIFFRGGSDDNKKKADKL
KIQFCHNGGDSLTLLNVYREWNKEPEKQKNKWCFANSLNSKALRIARETVNEVMTLLKKE
AKVKVMHDFKDPQGADVKLQKILFESFTSNICHSLGLAKAGYYAPRLDQQVHAHPSSVLN
PLNLVPEWLVFEQSMKTSKDFITGLTPVNESWVVEAIESGRLKRDLEEMRKKQLLPVHVE
HVGSYLFWKLVGPYFTKLKQFEEEASNLVTPDLVVIEASKEKGELKIFCTDHTTEKLSQL
FNEVTGPVKEFLEGEDLEVPLGQSKERAGVRVILGKGADVKDILMADEYRTIFVDRPDEK
SSADTILNKFGRFGKIKDHKVFKNPQKRWGCITFESSEAAKEAVNATKSDSSEVAVPEKH
GRGYQDSRFKVKITWCRRESKGFGFVDVAPEVMPQILRRGSLYIKGILVTIGIDRKSGKS
LYLRNLGQTITEADIKKSILSSLDYDEDEMEIFQKVTVVREKVNTTKEQLSTFKTRLQAQ
LKQYSPGNRFHLEIKEPYQTSVHYLAFASFTNPDEGIAVCQGLSRQFYLNDRVVTMEPDI
RSSLYVNREVHAAIKDDLDAYLEEFSTFGYSEVGVTSKTLKDGTVVLDIKASSSIELAKV
RANLQDIVQGDVLECGANPNLRQLFTRAGRDFLKDAEKKCNAFIQVDGRTFTLSIRGKQE
ACTRVRILINDYLQELSEGEWKEVRLRGRDKPNGLMKTLMNEYGIELEKLQQDIGLRSVV
LNFKQQIVKLVGSAKDIDKAVKVIEDISSKLLDGVKAPEEEELPDCCVCFCPIEPKELCR
LQCCGHAYCLDCVKRQVETAVTGRDLPILCGHDGCGQPFAWKDLSNLVREGTLTVARLAS
SSLSSFVGKNSRTYKYCLTPNCNMVYRVTSTGAVFQCPECSVRICTSCHTQYHDGLTCAM
YKSAKDDEGSLEQWLAVHSKTTKKCPNCKTPIEKTEGCNNMHCKACDCSFCWLCLEWFRT
SRQCYDHLSEKHGGCFD
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggcgtagttctggactaaaccttgtcaatgaggcaatgatgaaggaggtggat
cagcttagcagatcgaaaccagttgccgcattagagaccttaggtgccaacaagatggca
gccatccccagtgtatcaaatgagggtgaagatctgctgtcacaggcttcagtgacagag
gcacctcccactgatgataatgtacaagaggttattaagacccaaatctatgttagatct
gatctccctggtgtttcagttatgtcagagactgtcactgatggacgcatacgtgatgat
gagggggcggggagcaataggaatagcagcaaacctgtaccaaaacctagaagaacctta
aggcaaaacgaaccaaaggaagatgaatctggagcatctaaggagaggaatgatgatcca
acagaggataattcatcacgacttggtcttgcaggtaccaacaaccaagggaccgccaca
gacatgggcagacagtacacttatggaagaccaaaaggtggagtttacacaggaaaaggt
ggcaaggaaagacggaggtctcaaactgaaacccgtgacaatggacaagacacaaaaggg
ggaaaaagttcctggacaaagcaagggattagtagcgaaagtcctgagcaaataccacat
gatagaagaggtagtgtgaccaggactagaaaggataacttgtcagaagggacacataac
aaaggtgtctcacaagacaaagagaacaaactaaatgacaatcagaagggcgaaagaagg
agagcccccaaaaagaagaaaccaagggatgagttggaggggttcctgcgaaataatgtt
gggaagcagactcctgtgattctctatgttagaattgggcaactcctcgatcaaaagtat
gatgttaaaggttttctttgtgcaagaatgcaaattgaacaagatgaccaatccaaaaag
ttcatcgttgtgaaaagtgaacatgttggaagtaacactgtaatttcagttgaagcacca
agtaaatctgtggcaaacaaaattggaaatttactgaaattaagtaacagaggatctgag
actaagttagtctgtacactggacaggaacgaggccctggatctgcctactaagagggat
gaaagagaatttgagaaacatctcacaatcattaaaagaagggaaaaccaagccttaagc
aatcatatggataaaatcagtgttacttccaagaatattgagagactgtcatcaaacaag
catgtaacaattgatgagtatgaggcaaaacagtatgaaaaagatgctctgaaggataag
ttagaagagttgaaactgcagaaggaacagtttacaacatttatgaagagttttgtgtcg
aaacttgtttcactatggaaaaataatacctatgctaaacacattgaagatctacggaga
gactttggtgtcgagctttgtagacttacttcagcactgcctatgtatgcaagaagaaat
gatataatcagaacggtacaggacaaccaggtttgtgttatattaggggagactgggtca
gggaagagcacacagatgacacagtaccttcatcaggctggcttcagcaaagatggattc
atcgtgtgcacacaacccaggaaggttgcggccataagtctggcaacccatgttgcatca
gagctggtgacaaatgtgggcaatgttgtgggatataaagttgggatgcgatctaaatgc
ggaggagctaccaagatcttgtacatgactgatcactgccttctgaacgaatgtctaaaa
gatccaactctgtctgcttacagctgtgtgatagttgacgaagcacacgagagaagcatc
tacactgacctgctccttggaatgctgaagatgtgcctgaaacagcgccctaatctcagg
gcgatcattacatcagcgactattgaccctgaagtctttgtcagatattttggcgagtgc
ccagtcttgagagtatctgggagaatgtttcctgtcgaagtagagtaccaaacagaaaat
gatggaggcaagtcttttgataactatcagagagaagctgtcaacaaagctgtacaagtc
cacacaaaagatccaccaggtgacattctggtctttgttacatctcctttagagactgaa
aaatgcagtgaggattttaacaaaagactccagggaaggactgacttcaaatgtctggtt
cttcatggtcagattcagccagatgagcagcagctagtttttcagaacaccccttcagga
gtcagaaagattgtctttgccacaaacagtgcagagacttcaatcaccattccaggtatc
aagtatgttattgatactggtcttgcaaaagagaaacgttatgatcctcgacgaaacatg
agcacattgagtgtagttcttatcagtcgcagctcagcagatcagaggaaaggtcgtgca
ggaagaacaggccctgggaaatgttacaggctctacagtgaagagacgtatcaggaaatg
gaagcagtctcactgccagagttattgaaggttcacctaggacaggctatgctgaagctg
acggagcttggaattaatccgctagagtatgaatttgttcagtcaccgggaccatcagca
atagctacagctatgactacacttgaggaactcggtgcagtcaaagacaataagatcacg
gaagaggggaaagaactagcaaggcttcctgtagaacctcgactgggactaataatccag
aaaggaagatctgaagatgttctctttgatgcagttgttcttgcagctgtgagcaatgtt
ggaagctccatattcttcagaggtggaagtgatgacaataagaagaaagctgacaagctg
aagatacaattttgccacaatggtggcgatagtctcactttgctgaatgtatacagagaa
tggaacaaagagcctgaaaagcagaaaaacaaatggtgctttgcaaacagcctaaattca
aaagctctgcgaattgccagagaaactgtcaatgaggtgatgacgcttttgaagaaggag
gcaaaagtgaaggtcatgcatgattttaaagacccacaaggagcagatgtgaaacttcag
aaaatactctttgaaagcttcacctccaacatctgtcattctctcggacttgctaaggca
gggtattatgctccgagacttgatcaacaggttcatgctcatccctcatctgtcctgaat
ccactcaacttggttcctgagtggctagtctttgagcagtccatgaagacatccaaagac
ttcattacaggactgacgccagtgaatgaatcctgggttgttgaagccattgaatctgga
cgtctaaagagagatctcgaagagatgagaaagaaacagcttcttccagtgcatgttgaa
catgtcggatcatatcttttctggaaacttgttggtccttattttacaaaactaaaacaa
tttgaagaagaagcatcaaatctagtaacaccagatctggttgtcattgaggcgtcaaag
gaaaaaggggaactgaagatattttgcactgatcatacaactgagaaattatcgcaactc
ttcaatgaagtaactggacctgtgaaagagtttttggaaggagaagatttggaagtacca
ttgggtcagtctaaagagcgtgctggtgttcgtgtcatccttggcaaaggggcagatgtg
aaagacatcctcatggcagatgaatacagaacaatatttgttgatcgtccagatgaaaag
tcgtcagcagacaccatcttgaacaagtttggccgttttggaaagataaaggaccacaag
gtgtttaagaatccccaaaagcgatggggttgtattacatttgaatcttcagaagcagca
aaggaagcagtgaatgcaacaaaatctgattcttcagaagttgctgttcctgagaaacat
ggtcgaggctatcaagactcccggtttaaggttaaaatcacatggtgtaggagagagtcc
aaaggatttggttttgttgatgttgccccagaagtgatgccacagattttgcgaagagga
tcattgtatatcaaaggaatacttgtaactattggtattgacaggaaaagtggaaagagc
ctttatcttagaaatcttggtcaaactattactgaagctgacatcaaaaagtcaattcta
tcctctttggactatgatgaagatgagatggaaatatttcaaaaggtaactgtagtcaga
gagaaagtgaacacaaccaaagagcaactgagtacctttaagactcggctacaggcacag
ctcaaacaatattcaccaggcaacagattccatctggagatcaaagagccatatcaaaca
agtgttcattaccttgcctttgcatctttcacaaatccggatgagggtatagcagtttgt
cagggtttgtccaggcagttctatctcaatgaccgagtggtcaccatggagccagacata
aggtcatcattgtatgtaaacagagaagtacatgcagcaatcaaagatgacctggatgca
tacttggaagaattctcgacctttggttactcagaagttggagtgacttcaaagacactg
aaagacggaactgttgtacttgatatcaaggcatctagttccatagagctggcaaaggtt
cgagctaacctacaggacattgtacagggagacgttctggaatgtggagcaaatccgaat
ctacggcaactttttaccagggctggtagagactttctgaaagacgctgaaaagaagtgt
aatgctttcattcaagttgatggtagaaccttcacgctatccatccgaggaaaacaggag
gcatgcactcgagtacgcattttaatcaatgattatcttcaagaattgtctgaaggagaa
tggaaggaggtacgcttgaggggaagagacaaacctaatgggctgatgaagacattgatg
aatgaatatggcatagagcttgagaagctacagcaggacattggcctcagatctgtagtc
ctgaacttcaagcaacagattgtgaagttggtgggatcagctaaagacattgacaaagct
gtcaaagtcatagaagacatttcatctaaattgctagatggtgtcaaagctccagaggag
gaagaactgccagattgttgtgtctgtttctgcccaatagaacccaaggaactgtgcaga
ctgcagtgctgtggccacgcctactgtcttgactgtgtcaagagacaagtggaaactgca
gtcactggtcgagacttgcccatcctttgtgggcatgatggatgtggtcaaccatttgca
tggaaggatttgtctaatttggtgcgagaagggacattaactgtagcaagactggctagt
tcctctttgagttcctttgttggcaagaacagcagaacctataagtactgcttgacccca
aactgcaacatggtgtaccgagtgacctcgacgggagctgtgttccagtgccctgagtgc
agtgtaagaatatgcactagttgccacactcagtatcacgatggactcacctgtgccatg
tacaagagtgccaaggacgacgaaggcagccttgaacagtggcttgctgtccattccaaa
acaacaaagaagtgcccaaactgtaagacccctatagagaaaacagaaggctgcaataat
atgcattgtaaagcgtgcgactgcagcttctgttggttgtgtcttgaatggttcagaaca
tcccgtcaatgttatgatcatttgagtgaaaaacatggcgggtgttttgattaa
DBGET
integrated database retrieval system
