Haliotis cracherodii (black abalone): 139456349
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Entry
139456349 CDS
T10814
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03040
Spliceosome
Brite
Enzymes [BR:
hcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139456349
Spliceosome [BR:
hcra03041
]
Complex C
Other components
Step II factors
139456349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_DEAH11
Helicase_C
IBR
OB_NTP_bind
AAA_22
IBR_1
DEAD
RRM_1
IBR_2
HA2_N
RBD_DEAH11
nSTAND3
RRM_DEAH11
AAA_19
KH_DEAH11_2nd
AAA_30
ABC_tran
Helicase_RecD
KH_DEAH11_1st
Ribosomal_L31
BRK
UBR4
AAA_16
AAA_29
Motif
Other DBs
NCBI-GeneID:
139456349
NCBI-ProteinID:
XP_071094097
LinkDB
All DBs
Position
Unknown
AA seq
1610 aa
AA seq
DB search
MAAKSSVSGEVEGQVSRVSADTKTAAIPSDEIQNTLNMNEALALPTKRDESEFEKHFSII
RGKADKVLSLHMEKINVTSKNIESLSSNKHVTIDEYEAKRYEKDALKDKLEELKLQKEQF
TTFMKSLESRLVSLWNNNTYAEHIDNLRRDFGVELCRLTSALPMYARRNDIIRTVEDNQV
CVILGETGSGKSTQMTQYLHQAGISKDGFIVCTQPRKVAAISLATHVASELVTNVGNVVG
YKVGMRSKCGGATKILYMTDHCLLNECLKDPTLSAYSCVIVDEAHERSIYTDLLLGMLKM
CLKQRPNLRAIITSATIDPEVFVRYFGKCPVLRVSGRMFPVEVEYQEENDGGKSFDNYQR
EAVNKAVQVHTKDPPGDILVFVTTPLETEKCSEEFNNRLQGRTDFKCLILHGQIQPDEQQ
LVFQDTPSGVRKIVFATNSAETSITIPGIKYVIDTGLAKEKRYDPRRNMSTLSVVLISRS
SADQRKGRAGRTGPGKCFRLYSEETYHAMETVSLPEILKVHLGQAMLKLTELGINPLEYE
FVQSPGPSAIATAMTTLEELGAVKDNKITEEGKELARLPVEPRLGLIIQKGRSVDILFDA
VVLAAVSNVGSSIFFRGGSDDNKKKADKLKIQFCHSGGDSLTLLNVYREWNKEPEKEKNK
WCLANNFNSKALRIARETVNEVMTLLKKEAKVKVTNEFKDPQDADVKLQKILFDSFASNI
CHSLGLAKAGYYAPRLEQQVHAHPSTVLYPLNLVPEWLVFEQSMKTSKDFITGLTPVNES
WVVEAIESGRLKRDLEEMRKKQLLPVHVEHVGSYLFWKLVGPYFTKLKQFEVEASNLVKP
DLVVIEASKEKGELKIFCSDHTTEKLSQLFNEVTGPVKEYLEGEDLEVPLGQTKESAGVR
VILGNGGAVKDILMADEYRTIRVDSPGVNSSADTILNKFGRFGKIKDHRVFKNPQKRWGC
ITFESSDAAMEAVNMTKSDSSEVAVPEKHARGYQESQSKLQVKITWCRRESKGFGYADVA
PEVMPQILQRGSLNIKETLVNTSIDKKSGKSLYLRNLGQTITEADIKKAILSSMNYDEDE
ANIVHKVTVVREKVNTTEEQLTTFKTQLQAQLQHYSPDNRFQMEIKEPTATSVHYLAFAS
FTNPDEGIAACQGLSRQFYLNDRVVTMEPDIRSSLYVNRDVHAAIKDDLDAYLKEFSTYG
FTDVRVTPKPLKDKTVLYINASSSKELAKVRADLQNIIQGDVLECGMDQNLRQLFSRAGR
DFLKETEKKCNVFIQVDGRTFTLSIRGKKEACARVHILIKGYLQELSEGEWKEVHLRGRD
KPNGLMKRLMNEYGIELEKLQQDIGLRSVVLNFKQQTVKLVGSIEDIDKAVKVIEDISSK
LLDGVKAPEEEELPECCVCFCPIEPKELCRLQCCGHAYCLDCVKRQVETAVTGRDLPILC
GHDGCDQPFAWKDLSNLVREGTLTVAGLAVSSLSSFVGKNSKLYKYCLTPNCNMVYRVTS
TGAVFQCPECSVRICTSCHTQYHDGLTCAMYQSGRDDEDSLDQWLAANSKTTKKCPNCQT
PIEKTEGCNHMHCKACDCSFCWLCREWFKTPDECYNHLSERHGGCFDYEF
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaatctagtgtatcaggtgaggttgaagggcaggtgtcacgggtttcagca
gacaccaagacagcggcaattccctccgatgaaatacagaacacactgaacatgaatgag
gcactggctctgcctactaagagggacgaaagtgaatttgagaaacatttctcaatcatc
agaggaaaggcagataaagtcttgagccttcatatggaaaagatcaatgttacttccaag
aatattgagagtctgtcatcaaacaagcatgtaacaattgatgagtatgaggcaaaacgg
tatgaaaaagatgctctgaaggataagttagaagagttgaaactgcagaaggaacagttt
acaacatttatgaagagtttggagtctagactggtttcactatggaataataatacctat
gctgaacacattgataatctacggagagactttggtgtcgagctttgtagacttacatca
gcactgcctatgtatgcgagaagaaatgatataatcagaacggtagaggacaaccaggtt
tgtgttatattaggggagactgggtcagggaagagcacacagatgacacagtaccttcat
caggctgggatcagcaaagatggattcatcgtgtgcacacaacccaggaaggttgcggcc
ataagtctggcaacccatgttgcatcagagctggtgacaaatgtgggcaatgttgtggga
tataaagttgggatgcgatctaaatgcggaggagctaccaagatcttgtacatgactgat
cactgccttcttaacgaatgtctgaaagatccaactctgtctgcttacagctgtgtgata
gttgatgaagcacacgagagaagcatctacactgacctgctccttggaatgctgaagatg
tgcctgaaacagcgccctaatctcagggcgatcattacatcagcaactattgaccctgaa
gtctttgtcagatattttggcaagtgcccagtcttgagagtatctgggagaatgtttcct
gtcgaagtagagtaccaagaagaaaatgatggaggcaagtcttttgataactatcagaga
gaagctgtcaacaaagctgtacaagtccacacaaaagatccaccaggtgacattctggtc
tttgtcacaactcctttagagaccgagaaatgcagtgaagaatttaacaatagactccag
ggacggactgactttaaatgtctgattcttcatggtcagattcaaccagatgagcagcag
ttggtatttcaggacaccccttcaggagtcagaaagattgtctttgccacaaacagtgca
gaaacttcaatcaccattccaggtatcaagtatgttatcgatactggtcttgcaaaggag
aaacgttatgatcctcggcgaaacatgagcacattgagtgtagttcttatcagtcgcagc
tcagcagatcagaggaaaggtcgtgcaggaagaacaggccctgggaaatgtttcaggctc
tacagtgaagagacgtatcatgcaatggaaacagtctcactgccagagatactgaaggtt
cacctaggacaggcaatgttaaagctgacggagcttggaattaatccactagagtatgaa
tttgttcagtcaccaggaccgtcagcaatagctacagctatgactacacttgaggaactc
ggtgcagtcaaagacaataagatcacggaagaggggaaagaactagcaaggcttcctgta
gaacctcgactgggactaataatccagaaaggaagatctgtagatattctctttgatgca
gttgttcttgcagctgtgagcaatgttggaagctccatattcttcagaggtggaagtgac
gacaataagaagaaagctgacaagctgaagatacaattctgccacagtggcggcgacagt
ctcactttgctgaatgtatacagagaatggaacaaagagcctgaaaaggaaaagaacaag
tggtgccttgcaaacaacttcaactcaaaagctctgcgaattgccagagaaactgtcaat
gaggtgatgacacttttgaagaaggaggcaaaagtgaaggtgacgaatgagtttaaagac
ccacaagatgcagatgtgaaacttcagaaaatactctttgacagctttgcctccaacatc
tgtcattctctcgggcttgcgaaggcagggtattatgctccgagacttgagcaacaggtt
catgctcatccctctacggtcctgtatccactcaacttggttcctgagtggcttgtcttt
gagcagtccatgaagacatccaaagacttcattacaggactgacgccagtgaatgaatcc
tgggttgttgaagccattgaatctggacgtctaaagagagatctcgaagagatgagaaag
aaacagcttcttcctgtgcatgttgaacatgtcggatcatatcttttctggaagcttgtt
ggtccttattttacaaaactaaaacaatttgaagtagaagcatcaaatctagtaaaacca
gatctggttgtcattgaggcgtcgaaggaaaaaggagaactgaagatattttgctctgat
catacaactgagaaattatcgcaactcttcaatgaggtaactggacctgtgaaagagtat
ttggaaggagaagatttggaagtgccattgggtcagactaaagagagtgctggtgttcgt
gtcatccttggaaacgggggagctgtgaaagacatcctcatggcagatgaatacagaaca
atacgtgttgacagcccaggtgtaaattcatcagcagacaccatcttgaacaagtttggc
cgttttggaaagataaaggaccacagggtgtttaagaatccccaaaagagatggggttgt
attacatttgaatcttcagatgcagcaatggaagcagtgaatatgacaaaatctgattct
tcagaagtcgctgttcctgagaaacatgctcgagggtatcaagagtcccagtcaaaactc
caggttaaaatcacatggtgtagaagagagtccaaaggatttggttatgctgacgtggca
ccagaagtgatgccacagattttgcaaagaggttcactgaacatcaaagaaacacttgta
aatactagcattgacaagaaaagtggaaagagcctttatcttagaaatcttggtcaaact
attactgaagctgacatcaaaaaggcaattctatcatctatgaactatgatgaagatgag
gcaaacatcgttcataaggtaactgtagttagagagaaagtgaacacaaccgaagagcag
ttgaccactttcaagactcagctacaggcacagctccaacactattcaccagacaataga
ttccagatggagattaaagagccaacagcaacaagtgttcattaccttgcctttgcatct
ttcacaaatccggatgagggtatagcagcttgtcagggtttgtccaggcagttctatctc
aatgaccgagtggtcaccatggagccagacataaggtcatcactgtatgtaaacagagac
gtgcatgcagcaatcaaagatgacctggatgcatacttgaaagaattctcgacctatggc
ttcacagatgttcgagtcactccaaagccactgaaggacaaaactgtactttatatcaat
gcatctagttctaaagagctagcaaaggttcgagctgatctacagaacatcatacaggga
gacgttcttgaatgtggaatggatcagaatctccggcaacttttttccagggctggaagg
gactttctaaaagaaactgaaaagaagtgcaatgttttcattcaagttgatggtagaacc
tttaccttatccatccgagggaaaaaagaagcatgcgctagagtacacattttaatcaaa
ggttatctccaagaattgtctgaaggagaatggaaggaggtacatttgcggggaagagac
aaacctaatgggctgatgaagagactgatgaatgaatatggcatagagcttgaaaagcta
cagcaggacattggcttgagatctgtagtcctgaacttcaagcaacagactgtgaagtta
gtggggtcaattgaagacattgacaaagctgtcaaagtcatagaagacatttcatccaaa
ttgctggatggtgtcaaagctccagaggaggaagaactgccagagtgttgtgtctgtttc
tgtccaatagaaccaaaggaactgtgcagactgcagtgctgtggccacgcctactgtctt
gactgtgtcaagagacaagtggaaactgcagtcactggtcgagacttgcccatcctttgt
gggcatgatggatgtgatcaaccatttgcatggaaggatttgtctaatttggtgcgagag
gggacattaacagtggcaggtctggctgtctcctctttgagttcctttgttggcaaaaac
agcaaactctacaagtactgcttgaccccaaactgcaacatggtgtaccgagtgacctcg
acgggagctgtgttccagtgccctgagtgcagtgtaagaatatgcactagttgccacact
cagtatcatgacggactcacctgtgccatgtaccagagtggcagagatgacgaagacagc
cttgatcagtggttggctgccaattccaaaacaacaaagaagtgtcctaactgtcagacc
cctatagagaaaacagaaggttgcaatcatatgcattgtaaagcgtgcgactgcagcttc
tgttggttgtgtcgtgaatggttcaaaacacccgatgaatgttataatcatttgagtgaa
agacatgggggatgctttgattatgagttctaa
DBGET
integrated database retrieval system
