Haliotis cracherodii (black abalone): 139456355
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Entry
139456355 CDS
T10814
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139456355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcra03041
]
139456355
Spliceosome [BR:
hcra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
139456355
Complex C
U5 SnRNP specific factors
139456355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
139456355
NCBI-ProteinID:
XP_071094105
LinkDB
All DBs
Position
Unknown
AA seq
2365 aa
AA seq
DB search
MAFPYTVIGPGGQPFLISQPVLQQIVVPMAPPQQQPPMPHPPQPPPPQQPKVPDYMSEEK
LQEKARKWQQLQSKRYAEKRKFGFIDAQKEDMPSEHVRKIIRDHGDMTNRKFRHDKRVYL
GALKYMPHAVMKLMENMPMPWEQIRDVSVLYHITGAITFVNEIPWVIEPVYIAQWGTMWI
MMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQMDLDPDEDKDVGDWLYE
HKPLIDSKHVNGTTYRKWNLTLPQLSVLYRLANQLLTDLVDRNYFYLFDLKSFFTAKALN
LAIPGGPKFEPLVKDKDMHDEDWNEFNDINKIIIRQPVRTEYRIAFPYLFNNIPFQVHLS
WYHTPNVVFIKTEDPDLPAFYFDPLINPISHRNTVKGTEPLPDDDEEFELPEFVQPFLAE
TPLYTDNTANGIALLWAPRPFNLRSGRSRRAMDVPIVKNWYREHCPAGMPVKVRVSYQKL
LKYYVLNALKHKPPKAQKKRYLFRSFKATKFFQTTQLDWVEVGLQVCRQGYNMLNLLIHR
KNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDSHVQYRLGNVD
AFQLSDGIQYVFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGIW
APGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRAAVM
HDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRFVKAKADWW
TNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIY
TTMVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQA
YDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYLDQYLWYEA
DKRRLFPTWSKPSDSEPPPLLVYKWCQGINNLQDVWDTSEGECNVMLESHFEKMYEKIDL
TLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQFYGLILDL
LVLGLHRASEMSGPPQMPNDFLTFQDVATETAHPIRLFSRYIDRIHIYFRFTAEEARDLI
QRYLTEHPDPNNENIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQW
ENSFVSVYSKDNPNLLFNMCGFECRILPKCRTTHEEFTHKDGVWNLQNEVTKERTAQCFL
RVDEESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVK
CENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGI
THFRSGMSHDEDQLIPNLYRYIMPWESEFIDSQRVWAEYALKRQEANAQNRRLTLEDLED
SWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNY
RTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIP
NRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVV
MDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNVSKPSLLADSKD
VMDGATTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGLLIAVDLAYN
LHSAYGNWFPGCKPLIQQALAKIMKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGE
LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQ
KRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQ
LPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDKT
KIVLKPDKTTITEIHHIWPTLTDEEWMKIEVQLKDLILADYGKKNNVNVASLTQSEIRDI
ILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYESATFSSK
TEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNILKKFIIISDLRAQIAGYLYG
VSPPDNPQVKEIRCIVMPPQWGTHQTVHLPNIQPEHEYLKEMEPLGWIHTQPNELPQLSP
QDITTHAKVMADNSSWDGEKTVIITCSFTPGSCSLTAYKLTPSGYEWGRQNKDTGNNPKG
YLPSHYERVQMLLSDRFLGFFMVPGQSSWNYNFMGVRHDPNMKYDLHLANPKEFYHEVHR
PSHFLNFSTMEDQEVIGADREDMFQ
NT seq
7098 nt
NT seq
+upstream
nt +downstream
nt
atggccttcccctatacagttatagggcctggaggccagcccttcttgatcagccagcca
gttttacagcagatagtagtacctatggctcccccgcaacagcagccaccaatgccacat
cctccacaaccccctccccctcagcaacctaaagtgccggactacatgtcagaggagaag
ttgcaagagaaggctcgtaaatggcaacagcttcaatccaagagatatgcagagaaaaga
aagtttggctttattgatgcccagaaggaagacatgccctcagaacatgtgcggaagatt
atccgagatcatggtgacatgaccaacagaaagttcagacacgacaaaagagtgtattta
ggtgccctaaagtacatgccgcatgcagtgatgaaactgatggagaacatgcccatgccg
tgggaacagatccgtgacgtcagcgtcctctaccacatcaccggagccatcacattcgtc
aacgagataccctgggtcattgaaccagtatacattgcacagtggggaacaatgtggatc
atgatgaggagagagaaacgtgatcggcgtcacttcaaacgtatgaggttcccacccttt
gatgatgaggagccacctctagactatgctgacaacgtcctggatgtggaacctctggaa
gcaattcagatggatcttgacccagatgaagacaaggatgttggggactggctgtatgaa
cacaaaccactcattgactcaaaacatgtgaatggcacaacgtacaggaagtggaacctg
actctcccccagctgtcggtgctgtatcgactggccaatcagctgctcaccgatctggtc
gacaggaactacttctatctttttgacctcaagtccttcttcacagccaaagctctcaac
ttggccattcctggtggacccaagtttgaacctctggtcaaagataaggacatgcatgat
gaggactggaatgaattcaatgacatcaacaagatcatcatccggcaaccagtgagaaca
gagtacagaattgccttcccatacctgttcaacaacatcccgttccaggtccatctctca
tggtaccataccccaaatgttgtcttcatcaagacggaggaccccgacttgccggcgttc
tactttgatcctctcattaaccccatctcacacaggaacacagtcaagggtacagagcct
ctgcctgacgatgatgaagagtttgagctgcccgagtttgtgcagccattccttgctgaa
acccccctgtacactgacaacacagcaaatggcattgctctgctgtgggcaccacgacct
ttcaaccttcggtcgggaaggagcagacgagcaatggatgtaccgattgtcaaaaactgg
tacagagagcactgtccagccggcatgccagtgaaggtgagagtgtcctaccagaagctg
ctcaagtactatgttctcaatgccctcaaacacaagccacccaaggctcagaagaagagg
tacctgttcagatccttcaaggctaccaaatttttccagaccacacagctggactgggtt
gaagttggcttgcaggtttgtcgtcaaggttacaacatgcttaacctcctcatccatcgt
aaaaacctcaactatctgcatctggactacaacttcaatctgaagcccgtcaagaccctc
accaccaaggaaagaaagaagtcccgttttggaaatgctttccatttgtgtcgtgagatc
ctacgtctgaccaagcttgtggtggacagccatgtgcagtacagactgggcaatgtggat
gccttccagctgtctgatggtatccagtacgtgttcgcccacgtgggtcagctgaccggc
atgtaccgttacaagtacaagctgatgagacagatccggatgtgtaaagatctcaaacat
ctcatctactaccggttcaacacaggcccagtaggcaagggtccaggctgtggaatctgg
gcgcccggttggagggtgtggctgttcttcatgcgtggaatcacaccccttctggagcgt
tggcttggcaacttgctgtccagacagttcgaggggcgacactcgaagggggtggccaag
actgtcacaaaacagagagtggagagtcactttgatctggagttgagagctgctgtaatg
cacgacatccttgacatgatgccagaagggatcaagcagaacaaggccaggaccatcctg
cagcatctgagtgaggcctggaggtgctggaaggccaacattccatggaaggttcctgga
ttgccaaccccaatagaaaacatgatcttgaggtttgtgaaggcaaaggctgattggtgg
actaacacagctcactacaacagggagagaatcagaaggggagctacagttgacaaaaca
gtctgcaagaagaaccttggtcgcctgacccgactttacctgaaggctgaacaggagcga
cagcacaactacctgaaggacggcccatacatcactgctgaggaggcagtggctatctac
accactatggtccactggctggagtctcgccgcttctcccccatccccttccctcccctg
tcatacaaacacgacaccaagcttctcatcctggctctggagagactcaaggaggcatac
agtgtaaagagtcgactgaatcagtcccagagagaggagttgggtttgattgagcaggcc
tacgacaaccctcacgaggctttgtccagaatcaagcgtcacctcctcacacagagagcc
tttaaagaagttggcattgagttcatggacctgtacagccacctgatcccagtgtacgac
gtggagcctctcgagaaaatcaccgacgcctacctggatcagtatctgtggtacgaggct
gacaagagacgactcttccctacgtggagtaagccctcagactcagagcctcctccgctc
ctggtgtacaagtggtgccagggtatcaacaacctgcaggatgtgtgggacacgagtgag
ggagagtgtaacgtcatgctggagtctcactttgagaagatgtacgagaagattgacttg
acgctacttaacaggctgctccgtctcatcgtggatcacaacatagctgattacatgaca
gccaagaacaatgtcgtcattaactataaggacatgaaccacaccaactcgtacggcatc
atcagaggtctgcagtttgcatcattcatcgtacagttctatgggctgatcctggacctg
ctcgtccttggcctacacagagccagtgagatgtccggcccgccacagatgccaaatgac
ttcctcacattccaggatgtggcaacagagacagcacatcctatacgactgttctccaga
tacatcgatcgtattcacatttacttcagatttactgctgaggaagctcgtgacttgatc
cagcgctacttgactgaacacccggatcccaacaatgagaacatagtgggttacaacaac
aagaagtgttggccgcgagactccaggatgaggctcatgaagcacgatgttaatctgggt
cgtgcggtattctgggacatcaagaaccgtctgccgaggtcagtaacgacgatacagtgg
gagaacagcttcgtgtctgtgtacagcaaggacaaccccaacctcctgttcaacatgtgt
ggctttgagtgccgcatccttcccaagtgccgaaccactcacgaggagttcacacacaag
gacggcgtgtggaacctgcagaatgaggtgactaaggaacgaacagctcagtgttttctg
cgcgttgatgaggaatccatgcagaggttccacaaccgagttcgacagatcctcatggca
tcaggatccactacattcacaaagatcgtcaacaaatggaacacagctcttattggtctg
atgacatatttccgtgaagctgtcgtgaacacacaggaactcctagatctgctagtcaaa
tgtgaaaacaaaatccagacacgtattaagattggtctcaactccaaaatgcctagtcgt
ttccctccagtcgtgttttacacgcccaaagaactggggggcctgggtatgttgtccatg
ggtcacgtgttgatcccccaatcggatctgagatggtccaagcagactgatgtaggcatc
actcacttccgctcgggtatgagtcacgatgaggatcagctcattccaaacttgtacaga
tacatcatgccctgggagagtgagttcattgattcccagcgagtgtgggcagagtacgct
ctcaagagacaggaggcaaatgctcagaacagacgtctgacactagaagatctggaagac
tcctgggaccggggcatccctcgtataaacacgctgttccagaaagatcgtcacaccctc
gcgtacgacaagggctggcgagtaaggacagacttcaagcagtaccaggtcctcaaacag
aaccccttctggtggacccatcagcgtcacgacggcaagctgtggaatctgaacaactac
cgcacagacatgatccaggccctgggaggtgtggagggcattctggaacacacactcttc
aaagggacttacttccccacgtgggaaggtctcttctgggagaaggctagtggttttgag
gagtccatgaaatacaagaagctgaccaacgcccagagatcaggtctgaatcaaatcccc
aaccgtagattcacgctgtggtggtcaccaacaatcaacagagctaatgtgtatgtaggt
ttccaggtgcagctggatctgacaggaatctttatgcacggcaagatcccaactctgaag
atctccctcatccagatcttccgagctcacttgtggcagaaaatacacgagagtgttgtc
atggatctttgtcaggtgtttgatcaagagttggatgccctggagattgagactgtccag
aaggagaccatccatcccaggaagtcctacaagatgaacagctcctgtgctgacatcctg
ctgtttgctgcgtacaagtggaacgtctccaaaccatctctactggcagactccaaggat
gtgatggatggagccactacccagaagtactggattgatgtgcagctgagatggggagat
tacgactctcacgacattgagagatatgctcgcgccaagttcctggactacaccacagac
aacatgagtatctacccctcacccactgggctcctcatagctgtcgacctggcctacaac
ctacacagtgcctatggtaactggttccctggctgcaagcccctgattcagcaagccctg
gctaagatcatgaaggccaacccagccctgtatgtgttgagggagaggatcaggaagggt
ctccagctgtactcctcagagcccactgagccgtatctgagctcccagaactatggagaa
ctcttctccaaccagatcatctggtttgtggacgataccaacgtgtacagagtcaccatc
cacaagacatttgagggtaacttgaccacaaagcccatcaacggcgctatcttcatcttc
aatcccagaactggtcagctcttcctcaagatcatccacacctctgtgtgggctggacag
aagcgtcttggtcagctggctaaatggaagactgctgaggaagtagctgctctgattcga
tcactccccgtggaggagcagcccaaacagatcattgtcacaagaaaaggcatgttggat
ccactcgaggtccatttgctggatttccccaatattgtcatcaagggcagtgaactccag
ttgcctttccaggcttgtttgaaggtggagaagttcggagatctgattctgaaggctaca
gaaccccagatggtactattcaacctgtatgatgattggctaaagaccatctcctcgtac
acggcgttctctcgtctgatcttgatcttgagggctctacatgtgaacaatgacaagaca
aagatagtgcttaagccagacaaaaccaccatcactgagatccatcatatctggcccacg
ctcactgacgaggagtggatgaagattgaagtccagctgaaggatctcatcctggcggac
tatggcaagaagaacaatgtgaatgtagcctctttgactcagtctgagatccgagatatc
attctgggtatggagatctctgcgccgtccgcacaaagacaacagattgccgagatcgag
aaacagaccaaggagcagtcccagctgacggctaccacaactcggacagtcaacaaacat
ggtgacgagatcatcacctccaccacaagcaactacgaatcagccactttctcctccaag
actgagtggcgagtccgagccatctcggccaccaatcttcatctgcgtaccaatcacata
tatgtgtcgtcggacgacatcaaagagactggctacacttacattctgcccaaaaatatc
ctcaagaaatttattatcatctcggatctgagagcacagattgcgggttacctgtatgga
gttagcccccctgacaacccccaggtgaaggagatccggtgtattgtgatgccgccccag
tgggggacccatcagaccgtccacctgcccaacatacaaccagagcatgaatatctcaag
gaaatggaaccgctgggttggattcacactcagccgaatgagttgccacagttgtctccc
caggatatcactacacatgccaaggtgatggcggacaactccagctgggatggagaaaag
actgttatcatcacatgcagtttcacccccggctcctgttcactgacagcctacaagctg
actcccagtggttatgagtggggtcgccagaacaaggacaccggcaacaaccccaagggt
tacctcccctctcactatgagcgagtacagatgttgttgtctgacagattccttggtttc
ttcatggtgcctgggcagagttcatggaactacaacttcatgggtgttcgacatgacccc
aacatgaagtatgaccttcaccttgccaacccgaaggagttctaccatgaggttcatcga
ccgtcccacttcctcaacttcagtaccatggaagatcaggaggtgatcggtgcagacaga
gaggatatgttccagtga
DBGET
integrated database retrieval system
