Haliotis cracherodii (black abalone): 139456585
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Entry
139456585 CDS
T10814
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra04142
Lysosome
hcra04144
Endocytosis
hcra05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
139456585
04142 Lysosome
139456585
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139456585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcra04131
]
139456585
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hcra04147
]
139456585
Membrane trafficking [BR:
hcra04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
139456585
Exosome [BR:
hcra04147
]
Exosomal proteins
Proteins found in most exosomes
139456585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
HEAT_Nup120
capSnatchArena
TPR_CcmH_CycH
TPR_1
Motif
Other DBs
NCBI-GeneID:
139456585
NCBI-ProteinID:
XP_071094477
LinkDB
All DBs
Position
Unknown
AA seq
1690 aa
AA seq
DB search
MTQLLPIRFQEHLQLQNVGINAANIGFSTLTMESDKYICVREKVGETAQVVIIDMNDTAN
PIRRPISADSAIMNPTSKVIALKAGKTLQIFNIEMKSKMKAHTMTDEVTFWKWISVNTIG
LVTDNAIYHWSMEGDSQPQKMFDRHSNLAGCQIINYRTDPKQQWLLVVGISAQVSPNEQN
RVVGAMQLYSVERKVSQPIEGHAAAFVQFKMEGNPQPSTLFIFSVRGPQGGKLHVIEVGQ
PPQGNQPFPKKAVDVFFPVEAQNDFPVAMQTSQKHGMAFLITKYGYIHMYDIETGTCIYM
NRISSDTIFVTAPHEATSGIIGVNRKGQVLSVSVEEDNIVQYINTTLQNPDLALKVSSRS
NLPGAEDLFVRKFNNLFQNAQYSEAAKVAASAPKGILRTPQTIQRFQQVPSQPGATSPLL
QYFGILLDKGQLNKYESLELCRPVLQQGRKQLLEKWLKEEKLESSEELGDLVKQADPTLA
LSVYLRANVPNKVIQCFAETGQFQKIILYSKKVNFTPDYIFLLRNIMRINPEQGLQFAQM
MVQDDEPLADLNQIVDVFMEFNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMSAPQV
ADAILGNQMFTHYDKAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYF
GSLSVEDSLECIKAMLTANIRQNLQVCVQIASKYHEQLSTQSLIEVFESYKSFEGLFYFL
GSIVNFSQDADVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLI
IVCDRFDFVHDLVLYLYRNSLQKYIEIYVQKVNPARLPVVVGGLLDVDCGEDVIKQLIMV
VKGQFSTDELVAEVENRNRLKLLLPWLETRVHEGVNEPATHNALAKIYIDSNNNPERFLR
ENQFYDSVVVGKYCEKRDPHLACVAYERGQCDQELIKVCNENSLFKSEARYLVRRKDVEL
WAEVLQETNEYRRQLIDQVVQTALSETQDPEEISITVKAFMTADLPNELIELLEKIVLES
SVFSDHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELYEEAFAIFKKF
EVNTSAISVLIDNVNNLDRAYEFAERCNDPAVWTQLGRAQLNKGMVKEAIDSFIKADDPS
QYMEVVQVASQSNNWEDLVKFLQMARKKARETYVETELVYAFAKTNRFADMEEFISGPNH
ANVTQVADRCFDDKMYEAAKLLYNNVSNYARLAITLVHLGEYQGAVDGARKANSTKTWKE
VCFACVDNEEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELISLLEAALGLERAHMG
MFTELAILYSKYKPEKMREHLELFWSRVNIPKVLRAAEQAHLWSELVFLYDKYEEFDNAI
LTMMAHPTEAWRESQFKDIVTKVANIELYYKAIQFYLDYKPMLLNDLLLVLTPRLDHTRS
VNFFAKANQIPLVKPYLRSVQKNNNKAINEALNNLFIEEEDYQGLRASIDAYENFDNISL
AQRLEKHELIEFRRIAAYLYKGNNRWKQSVDLCKKDKLFKDAMMYAGESRQVDIAEDLIA
WFLESQNNECFAACLFQCYDLLRPDVILELAWRHNIMDFAMPYMIQVMREYIGKVNSLVV
KVDKLEQSEAVRSEEEQKAEERPIVFSEPQLMLTAGPGVVPPGVVPPQPGYGGAYGAGPM
PTGMPFGYSM
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagctgcttcccatccgatttcaggagcatctacagctccaaaatgttggcatc
aacgccgccaacattggtttcagcaccctcaccatggagtctgacaagtacatctgtgta
cgggagaaggtgggggaaacggcacaagttgtcatcatcgacatgaatgacacggccaac
cccatccggagacccatatcggcagactccgccatcatgaaccccacaagcaaagttatt
gcactgaaagctggcaagacccttcagatcttcaacattgagatgaagagcaaaatgaag
gcccacacaatgacagatgaagtgactttctggaagtggatcagtgttaacaccatcggt
ctcgtcacagacaatgccatctaccactggagcatggaaggggactctcagccacagaag
atgtttgaccgccacagtaacttggcaggctgccagatcatcaactacagaacggatcct
aaacaacagtggctgttagtcgtgggcatttcagctcaggtcagtccaaatgagcaaaac
cgtgtcgttggagccatgcagctgtactctgtggagcgtaaagtcagtcagcccatcgag
ggacatgctgcagcgtttgtgcaattcaagatggaaggaaaccctcagccatcaacactc
ttcatcttcagcgtcagggggccccaaggaggaaagttgcatgtgattgaagttggtcag
ccacctcaaggaaaccagccattccccaagaaggcagttgatgtcttcttcccagtcgag
gcacagaatgatttcccagttgctatgcagacaagccagaagcatggcatggctttcctt
atcaccaagtatggctatatccacatgtatgatatcgagactggaacctgcatctacatg
aaccgcatcagcagtgacaccatcttcgtcaccgcaccacatgaggccaccagcggcatc
attggagtcaacaggaaaggacaggtgctgtcggtcagtgtggaggaggacaacatcgtg
cagtacatcaacaccaccctgcagaacccagacctggctctcaaggtgtcatcgcgcagc
aacctgcccggagccgaggacttgtttgtcaggaaattcaacaacctctttcagaatgca
cagtactctgaagctgctaaagttgctgctagtgcacccaagggcatcctgcgaacaccc
cagacaatccagcgtttccagcaggttccctcccagcctggcgccacctcccctcttctg
cagtacttcggtatcctgctggacaaggggcagctcaacaagtacgagtctctggaactg
tgtagacctgtgctgcagcagggacgcaaacaactcctggagaaatggctcaaagaggag
aagctcgagagcagcgaggagcttggtgatcttgtgaagcaggctgacccaacacttgcc
ctgtctgtctacctgagagcaaatgttccaaacaaggtgattcaatgttttgcggagacc
ggtcagttccagaagatcatcttgtactcgaagaaggtgaacttcacacccgactacatc
ttcctcctgcgtaacatcatgcgcatcaaccccgagcagggcctgcagtttgcacagatg
atggtgcaggatgacgaaccccttgctgacctcaatcaaatcgtggatgtattcatggag
ttcaacctgatccagcaatgtacatccttcctgcttgacgccctcaagaacaaccggcca
tcggaaggtcccctacagaccaggctgctggagatgaacctaatgtctgcaccacaggtt
gctgatgccatcctaggtaaccagatgttcacacactacgacaaagcacacatcgcccag
ctctgtgagaaagcaggtctcctgcagcgggccctggagcactacacagacttgtatgac
atcaagagagctgttgtacacacccatcttctcaaccctgagtggctggtgaactacttc
ggctcactgtctgtggaggactcgcttgagtgtatcaaggccatgctgacagccaacatc
cggcagaacctgcaggtctgtgtccagatcgcatccaagtatcatgagcagcttagcaca
cagagtcttattgaagtcttcgagtcttacaaaagtttcgaaggacttttctacttcctg
ggatccattgtgaacttcagccaggatgctgatgttcactttaaatacatccaggctgcc
tgtaagaccgggcaaatcaaagaagtggagagaatttgtagggagagcaactgctatgac
cctgagcgggtcaaaaacttccttaaggaggccaagctgactgatcaactgccactgatc
attgtgtgtgacaggttcgactttgtacatgacctggttctctacctgtacagaaacagc
ttacagaagtatattgaaatctatgtacagaaggtgaacccagctcgactccctgtcgtg
gtgggaggtctgctggacgtagactgtggtgaggacgtcatcaaacaacttattatggtg
gtcaaggggcagttctccactgatgagcttgtggctgaggtggaaaacagaaacagattg
aagttgctgctgccatggctagaaacaagagtacacgagggagtgaacgagcctgcaaca
cataatgctctagctaaaatctacattgatagcaataataacccagagaggttcctcaga
gagaaccagttctacgacagtgttgttgtaggaaagtactgtgagaagagagatcctcac
ttggcctgtgttgcatacgaaaggggacagtgtgatcaggaactcatcaaggtgtgcaac
gagaactcgctgttcaagagtgaggcaagataccttgttaggagaaaggatgttgagctg
tgggctgaggtactacaggagaccaatgagtaccggcgccaactcattgaccaggtggtg
cagactgcactgtctgagacacaggacccagaggagatctccatcactgtcaaggccttc
atgaccgctgacctgcccaatgaactcattgagctactggagaagatcgtgctggagagc
tcagtgttcagtgaccacaggaacctacaaaatttgctgattctgaccgcaatcaaagct
gaccgtactcgtgtgatggagtacatcaaccgtcttgataactatgatgcaccagacatt
gccaatatcgccataagtaatgagttatatgaagaagctttcgccattttcaaaaagttt
gaagtcaacacatcagccatctctgtcttgatagacaatgtgaacaaccttgaccgggca
tatgaatttgctgagcgatgtaacgaccctgctgtgtggacccaactgggtcgcgcccag
ctgaacaaaggcatggtgaaggaagcaattgactccttcatcaaggctgatgacccctca
caatacatggaggtggtacaagtggccagtcagagcaacaactgggaggacctggttaaa
ttccttcaaatggcccgcaagaaggccagagaaacatacgtagaaacagagctagtatat
gctttcgccaagaccaacaggtttgcagacatggaagagttcatctctggacccaaccat
gccaatgtcactcaggttgcagaccgatgctttgatgacaagatgtacgaagctgctaaa
ttattatacaacaatgtgtccaactatgcccgactggccatcactctcgtccacttggga
gaataccaaggagctgttgacggggctaggaaagccaacagcacgaaaacatggaaggag
gtgtgctttgcttgtgtagacaatgaggagtttaggttagctcagatgtgtggactgcac
atagttgtacatgcagatgaattagaagaacttatcaactattaccaagacagaggatac
tttgaagaacttatttccctcttagaggcagctttaggtttggagagagcacacatgggt
atgttcacagagttagcaatattgtattccaagtataagcctgagaagatgagagaacat
ctagagctcttctggtccagggtcaacattccaaaggttttgcgagcagctgagcaggct
catttgtggtctgagttggtgttcctgtatgacaagtatgaagagtttgacaatgcaatc
ctaacaatgatggcccatcctacagaagcctggagagaaagtcagttcaaggatattgtc
accaaagttgcaaacatagagctgtattacaaagctattcagttctacctggactataaa
ccaatgttgcttaatgacctgctcctggttctaacacccagactcgaccacacacgctca
gtcaacttcttcgctaaggctaaccagatcccgctcgtcaagccttacctgcggtctgtt
cagaaaaataacaacaaggccattaacgaggcactcaacaacctgtttattgaggaggag
gactaccagggacttcgggcatctattgatgcgtatgaaaactttgacaacatctcgctg
gcccagcgtctagagaagcatgagttgattgaattcaggagaatagcagcctatttgtac
aaaggcaacaacaggtggaagcagtctgttgatctttgcaaaaaggataaactgttcaag
gatgctatgatgtatgcaggagagtcaagacaagtggatatcgcagaggacctgatcgcc
tggtttctggagagtcaaaacaacgagtgttttgctgcatgtctgttccagtgctatgac
cttctgcggcctgatgttatcctggagcttgcatggcgacacaacatcatggacttcgct
atgccgtacatgatccaggtcatgagagaatacattggcaaggtcaacagtctagttgtg
aaggtggacaagttggagcagtcagaggctgtgaggagtgaggaggaacagaaggctgaa
gaaaggcccattgtgttctctgaacctcagttgatgttgacagccggccccggagttgtc
ccccctggcgttgttcctccccagcctggctacggtggcgcatacggtgcaggaccaatg
ccaacaggaatgccgttcggctacagcatgtag
DBGET
integrated database retrieval system
