Haliotis cracherodii (black abalone): 139459557
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Entry
139459557 CDS
T10814
Name
(RefSeq) pre-mRNA-splicing factor 38B-like isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139459557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcra03041
]
139459557
Spliceosome [BR:
hcra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
139459557
Complex C
U4/U6.U5 tri-SnRNP related factors
139459557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PBP_like_2
Motif
Other DBs
NCBI-GeneID:
139459557
NCBI-ProteinID:
XP_071097204
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MAPNNALPVWGNEKTMNLNTLILTNIQSSPYFKVNLFELKTYHEVIDEIYYKVMHLEPWE
KGSRKTAGQTGMCGGVRGVGAGGIVSSAYCLLYKLFTLKLTKKQLIGLITHADSPYIRGL
GFMYIRYTQPPNDLWEWYEDYLDDEEEIDVKAGGGHAITIGELCRQFLVKLEWYSTLFPR
IPVPVQKSIQEKLKTRPALRPAAEEPEFIPQDRNRGEEDVSFGEAERAANRRSPPRRHRS
RSPRRSSPHRRASPRRSPRRSPQRRHSPRRGSPRQDRERDRERRGPMDDFARELEREKER
QRREKEKDYKREKERRKEKESHRSRDIQSSHGRDRREETRNKEKRRSHSRERHERSRSRD
KRRSRSRERQEKSHSEDRVERSERHKHRSTDEHREKRRSRSREPKRSRSKEKSRDKHGRS
REDRDKDSNREHKRNRHDGENGES
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggcacccaacaatgccctgcctgtctggggcaatgagaaaacaatgaacctgaacact
ctcatactgaccaacattcagtcttcaccatacttcaaggtcaacctgtttgaactgaag
acataccatgaagtcattgatgaaatatactacaaggtgatgcacctggaaccctgggag
aaggggagtcggaagacagcaggccaaacagggatgtgtggcggggtgcgtggtgtagga
gcagggggcattgtttctagtgcctattgtttgctgtacaaactgttcactctcaagctg
accaagaaacaactcattggcctcatcacccatgctgattctccctacatccgaggcctg
ggtttcatgtatatcaggtacactcagcctccgaacgacttgtgggagtggtatgaagac
tatctggatgacgaagaggagattgatgtcaaggcaggtggaggacacgcaatcacgatc
ggagagctgtgtcgacagttcctggtgaagctggagtggtactcaacgctgttccctcgg
atcccagtcccagtacagaagtccatccaggagaagttgaagacgcgccctgctctgcgc
cctgctgcggaggagcctgagttcataccccaggaccggaatcgtggggaggaagatgtg
tccttcggagaggctgaacgtgctgccaacagacgaagtcctccaagaagacataggtca
aggtcacctcggaggtcatcacctcatagacgagcctcaccccgtcgttcaccaagacgg
tcaccccaaagaagacactcccctcgcagaggttccccaaggcaagaccgagagagggat
cgtgaaaggagaggtccaatggatgactttgcgagggaactggagcgagaaaaggaacga
cagaggcgtgagaaagaaaaggattacaaacgggaaaaggagaggagaaaggaaaaagag
tcccatcgaagccgagatattcaaagttcgcatggcagagatcgacgagaggaaacaaga
aacaaagagaagagaaggtcacacagtagagaacggcatgaaaggtcaaggagtcgagat
aagcgcaggtcgcgtagtcgtgagaggcaggaaaagtcccacagtgaggacagagtggag
agatctgaacggcacaaacataggtcaactgatgagcatagggagaagaggaggtcaagg
tcacgagaaccaaagaggtcaaggtcaaaagagaagagtagggataagcatggccgatct
cgtgaagatcgggacaaagactcaaatcgtgaacacaaacgaaatagacatgatggtgaa
aatggcgagtcttag
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