KEGG   Haliotis cracherodii (black abalone): 139459802
Entry
139459802         CDS       T10814                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
hcra  Haliotis cracherodii (black abalone)
Pathway
hcra04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hcra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    139459802
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hcra04121]
    139459802
Enzymes [BR:hcra01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139459802
Ubiquitin system [BR:hcra04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    139459802
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     139459802
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd EIF3I zf-C3HC4_2 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR19_1st zf-C3HC4 Beta-prop_EML WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 zf-RING_UBOX Beta-prop_Vps41 zf-RING_2 Beta-prop_DCAF4 zf-C3HC4_3 WD40_like Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N zf-C3HC4_4 Beta-prop_DCAF12 zf-RING_5 RING_XB3-XBAT31 Beta-prop_IFT140_1st WDR54 Sina_RING Beta-prop_SCAP zf-RING_6 Beta-prop_SPT8 zf-RING_10 U-box zf-rbx1
Other DBs
NCBI-GeneID: 139459802
NCBI-ProteinID: XP_071097583
LinkDB
Position
Unknown
AA seq 619 aa
MAGRTQQPPRRRKRVQTPVFSSIVGSYEDKDNDFVCPVCFDIIEEAHMTKCGHTFCFKCI
KQCLEKTNRCPKCNYIIDNAEHIFPNFTLNELILKYKGKQEEKKIKIEQQTCPGPADLVD
LVSEDNLDLANVNQLLEFLVHKKQQLEADGKLAENIILKEFLQRVRQGKQDELEKLNRDI
NLLDEDAKRVDDYINEQQEKYTACPDHLVPNGFEPIRPSINESICQDGFNGSKNAGKSFT
QTTMASRRKQISQHFEDLEQCYFDTRVKGVATGDDSHDGLREFTDSLSKFTRFSSFRPLA
TLSYAVDLLNGGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIKDVVDIHYPVVEML
CNSKISCVTWSAYHKGMLASSDYEGTVTLWDAFTGSKARMFQEHEKRCWSVDFNRMDPKL
LASGSDDAKVKLWAINSEHSVANLEAKANVCCVKFNPESRYHLAFGSADHCVHYYDLRNT
KQAVGVFRGHRKAVSYAKFVNAQEIVSASTDSQLKLWNLSKPNAVRTFKGHINEKNFVGL
ATDGDYVSCGSENNSLYIYYKGLSKQLMTYKFDTVRSVLDKDRKDEDANEFVSAVTWRPR
SNVVVAANSQGTVKVLELV
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggcaggcagaacgcaacaaccgccccgccggagaaaacgagtgcaaactcctgttttc
agtagtatagttggctcatatgaagacaaagacaacgattttgtctgtcctgtgtgcttt
gatatcattgaagaggctcatatgaccaaatgtggacatacgttttgcttcaagtgtatc
aagcagtgccttgagaagactaacaggtgtcccaagtgtaactacatcatcgacaatgca
gagcacatcttccccaactttacattgaatgagctgattctcaagtacaagggaaaacag
gaggaaaagaaaatcaaaattgagcaacagacttgtcctggtcctgctgatctggtggac
ttggtgtcggaagataaccttgaccttgctaatgtcaaccagctgctggagttcctggta
cacaagaagcaacaactagaagctgatggtaaattagctgaaaatattattctgaaggaa
tttctgcagcgagtacgacaagggaaacaagatgaactggaaaagttgaatcgggatatt
aacctactagatgaggatgccaaaagagtagatgattatatcaacgagcagcaagagaaa
tacacagcatgtccagaccatcttgtaccaaatggcttcgaacctattaggccgtccatt
aatgaatccatttgtcaagatggttttaacggaagtaaaaatgcagggaaatcgtttact
caaacaacaatggcatctcggaggaagcagatcagccaacattttgaggatcttgaacag
tgttacttcgatacaagagtgaaaggagtagctacaggggatgattctcatgatggactc
cgagagttcacagacagtctttcaaagtttactcgcttctcttcatttcgacctctagct
actctcagctatgctgttgaccttctcaatgggggatccagtatagtttcaagcattgag
tttgaccgagactgtgattattttgccattgctggcgttaccaaaaaaataaaagtatat
gaatatgggacagttatcaaagatgttgtagatatacattacccggtggtggaaatgctg
tgcaattctaaaataagttgtgtgacttggagtgcttaccacaaaggaatgctggccagc
tcggattatgagggaacagtcacgttgtgggatgccttcactggcagcaaggcccgaatg
tttcaggagcatgaaaagcgttgttggagtgtggacttcaacagaatggatcccaaactt
ctagcctctggctcggatgatgccaaagtgaaactatgggccatcaactcggagcactcc
gtggccaaccttgaggccaaggccaatgtgtgctgtgttaaattcaacccagagagcagg
taccatctagcctttggatctgcagatcactgtgtacactactatgatctgcggaacacg
aagcaagcagttggagtcttccgggggcacaggaaagcagtgtcatacgccaagtttgtc
aacgctcaggaaatagtctcagcgtccacggacagtcagctcaagctgtggaatctgagc
aaacccaacgcagtacgaacttttaaaggtcacatcaacgagaaaaattttgttggtctg
gcaactgatggagactatgtctcatgtggcagcgagaacaactctctttatatctactac
aagggtctttccaaacaactgatgacatacaagttcgacacagtcagaagtgtgctggat
aaagatcgaaaggatgaagatgccaatgagtttgtgagtgctgtgacatggagacctaga
tccaatgttgttgtggcagcaaacagccaaggaacggtcaaggttctggagctggtataa

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