Haliotis cracherodii (black abalone): 139461104
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Entry
139461104 CDS
T10814
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
139461104
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hcra04515
]
139461104
Cell adhesion molecules [BR:
hcra04515
]
Immunoglobulin superfamily
DCC/UNC5 family
139461104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Neogenin_C
Ig_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
ig
Interfer-bind
V-set
C2-set_2
NDNF
Tissue_fac
Fn3_VIN3
V-set_CD47
Ig_4
TMEM154
Protocadherin
Motif
Other DBs
NCBI-GeneID:
139461104
NCBI-ProteinID:
XP_071098729
LinkDB
All DBs
Position
Unknown
AA seq
1425 aa
AA seq
DB search
MANCFAEKLTGVSSWMRIYLSLQTALALVGATVPHFSQFYFTVEPHDLIVKKGSKSLLNC
SAYHGESTPNIQWKKDGNYLNFENSDRSLLANGSLYFNQVQHSKTAHPTDKGTYQCTATV
DGFGTIVSRKADLDIAYLSKHFIKEPEDLVVYLGDTAMFSCEIEGVPHPKVRWIKAGRAL
AKADNIYQYDDGILEIYPVRFADFGAYSCEAKNMERSRTSRVASLRQNPNTNIEEGVAPE
FVMRPKDHRADYGTTVVLHCGANGRDVKEETPTIKWLKDGVTIALANTKSARIKKVGSGS
LQITTLKESDGGVYTCRAVNQEDSIDADTMLTVLVPPRFVKRPANVFAHTNSDVKFECNI
YGEPNPRITWLKNGIVLFPSDYFQIVDGKDLKILGLVNSDDGIYQCFGENDLGNVQASAQ
LVILQPDVPLPTTPSLYPLIHPGALHADAKNLPTAPINLRAVLVSTRFVTLSWQPPAGSI
PSDIIAYSVFWQEKGSERERVTNTTTTEANIQHLKPHTEYEYRVIAYNRFGASRQEARIT
VTTDQEVHVPSPPVNLRAVAMTPTSIKVNWNPPVESKGRISHYVLIYYEVGSDSEKEVSV
YTTEHVLKKLKKFREYSLRVVAHNQNGPGMSTEEFVSKTFSDEPSAAPQNFTLEVSSATR
IIVRWEPPALDNRNGIITGYKIRYKRRGTKQGKTVTTDGNRNNYALTELRKGTEYQVRIS
ALTVNGSGPATSWEHVTTYRDDLSENQVPPRPARLSVKPRANSIIVTWAPPPSDSKILVR
GYVLGYGKNLPDVYRSTFDANTHDYTIQNLQPVSEYVISIRAFNKEGEGEVKYETVTTME
ETTEEPATPMMPPIGLKAIVLSPSTIVLTWADNTLGKSQKITDNRYYTVRYTPLPSHNRR
PRQLNSTDLNAHVDGLKPNTQYEFSVKVIKGRRQSTWSMSVINTTQESAPGSEPRDLTPV
AVEGNPLSVTLNWQPPQKPNGLITGYLIFYTTDSNQADRDWVLEGVVGDRLSTVISDLTP
DTTYYFKVQARNRKGYGPMSETKIYKTPKMDRAAMTDSDEQGGLSMNIIIIIIAVAVGII
FCIVIIVVGVLLCKKRDAQRQDIRSYKSPNKPLKGMPKDVKPPDLWIHQPNHMEMGKMDK
SQRSESNMSVATSTLRRSSRGSSDRLDEFPPGLDIMDKRRNSFVGESGYPSSGEERYQPA
HQRSIVRPKPITIPVDAQPLQKEPVATVTALPNGHITQMIDPRDVGGHPMRPVYPRTQYN
TQYTSTPRVNAGDIPQSSSSLMSPESPTQYDQQANTFAESTSGVVSSEALKVSLGRTPNP
LRSFALPGPPSPGATPPRHIVKPQPNLSPYKKPTPPITTGPIKSRSPLPLITSKAPDVTL
KAGKSGKEDNGMEKSLSTEELTAEMANLEGLMKDLNAITQQEFEC
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactgcttcgctgagaaactcaccggagtttcatcgtggatgaggatttacttg
agtctacaaacggcccttgcgctagtcggagccacagtcccccacttcagtcagttttac
ttcaccgtggagccgcatgacctgatcgtgaagaaaggctccaagtcgctcctcaactgt
tccgcctaccatggcgagtccacccccaacatacagtggaagaaagatggcaactactta
aattttgaaaattcagatcggagtttattagcaaatggatctttatatttcaaccaagtc
cagcattctaaaacagcccatccaactgacaagggcacctaccagtgtacagccactgtc
gatggattcggaaccatcgtcagtcggaaagctgatctggatattgcatacttgtcgaaa
cattttataaaagagcccgaggacttggtggtgtatcttggagatacagccatgttttct
tgcgagattgaaggggtaccacacccgaaagtcaggtggataaaagctgggagagccctc
gcaaaagcagacaatatataccagtatgatgatggtattttagaaatatatcctgtgaga
tttgcagacttcggggcctatagctgtgaagctaaaaatatggagaggtctcgaacgagc
cgcgtagcctcactacgtcagaaccccaacacaaatatagaagaaggtgtcgctcctgaa
tttgtgatgaggcctaaagatcatcgtgcggactacggaacgactgttgttctccactgt
ggcgccaacgggagggacgtgaaggaggagacacccacgataaagtggctgaaggatgga
gtcacgattgctttagcaaacaccaagagtgcaaggataaagaaggttggcagtggaagc
ctgcagatcacgacgttgaaggagagtgatgggggtgtctacacgtgtcgggctgtcaac
caggaagacagcatcgatgcagacaccatgttgacagtattagttcctcccagattcgtg
aagaggccagccaatgtatttgcccacaccaattccgatgtcaaatttgaatgcaacata
tatggagagcctaatcccagaatcacttggctaaagaacggcattgtgctctttccaagc
gactacttccaaatagtcgatggcaaagacttaaaaatacttggcctcgtaaattcggat
gacggcatttatcagtgttttggtgaaaacgacctcggcaacgtacaagctagtgcgcag
cttgtgattctgcaacctgacgtccccctccccaccaccccctctctgtaccccctcatt
catccaggagctcttcacgctgacgccaagaacctacccaccgcgcctatcaacctccga
gccgtcctggtgtcgactagatttgttacgttgtcatggcaaccgccagcggggagcatt
ccatccgacatcatcgcctactccgtgttctggcaggaaaaagggtctgaaagggagcgt
gtgaccaacacgacaaccacggaggccaacatccagcatctgaagccacacacagagtac
gagtaccgtgtgattgcctacaaccggttcggggctagtcgacaggaggccaggatcacc
gtcactactgaccaagaagtgcatgttcctagcccgcctgtcaacctccgagccgtggcc
atgacccccacctccatcaaggtcaactggaaccccccagtggagagcaagggccggatc
tcccactacgttctcatctactacgaggtcggctcggactccgagaaggaggtgtcagtg
tacaccacagagcatgtcctcaagaaactcaagaagttccgcgagtacagcctgcgagtg
gtagcgcacaaccaaaacggtcccggaatgagtactgaagaatttgtgtcaaagacattt
tcagatgaacctagtgctgcgccccagaacttcactctggaggtatccagtgccacgagg
atcattgtccgatgggaaccgcctgccttggataaccggaacggaatcatcaccggctac
aagatccgctacaagcggcgaggcaccaagcagggaaagaccgtcaccacggacggaaac
agaaacaactacgcactcacagagctgcgtaaggggacagaatatcaggttaggatctcg
gctttgaccgtcaatggatcgggtccagccacgtcctgggaacatgtgaccacctaccga
gatgacctatcagaaaaccaagtaccacctcggcctgcacggttgtctgtgaagccacgg
gctaactccatcatcgtcacgtgggcgccgccgccatctgactccaagatcctggttcga
ggctatgtgttgggatatggcaaaaatctccccgatgtgtaccgttccacgtttgacgcc
aacactcatgactatacaatacagaatctccagccggtgtcggagtatgtgatttctata
cgagcattcaacaaagaaggagaaggagaagtgaaatatgagacagtcaccacaatggaa
gagacaacagaggaacctgccacgcccatgatgcctccgattggtctcaaggccattgtc
ctgtccccatcaaccattgtgttgacatgggcagataacacccttgggaagagtcagaaa
ataacggataacagatattacactgtgagatacacaccgctaccgagccacaaccgtaga
ccgaggcagctcaactccaccgatcttaatgcccatgttgatggtctcaagccaaacaca
cagtatgagttctcggtcaaggtcatcaaaggtcgccgacagagcacgtggagtatgagt
gtgatcaacactacgcaagaatcagcgcctggttcagagccaagagacttgaccccagtg
gctgtggagggcaaccccctctctgtcacactcaactggcaacccccccagaaaccaaac
ggtttaatcacagggtacttgatattttacacaacggactccaaccaggccgacagagac
tgggtgttggagggcgtggtcggagatcggttgtctactgtgatcagtgatctcaccccg
gacacgacctactatttcaaggttcaagctcggaatcggaaaggctatggcccaatgtcg
gaaaccaagatctacaaaacaccaaaaatggacagagcagcgatgacggattccgacgaa
cagggtggcctgtccatgaacatcatcatcatcatcattgcggttgccgtgggaataata
ttttgcatcgtcatcatcgtggttggtgttctgctgtgcaagaagcgtgacgctcagcgc
caggatatcagaagctacaagtctccaaacaagcccctgaaggggatgcccaaggatgtg
aagcccccagacctgtggatccatcaacccaaccacatggagatgggcaagatggacaag
tcccagcgcagcgagtccaacatgtccgtcgccaccagcacgctacgtcggtcatcgcga
ggctcctccgaccggctggacgagttccctccagggctagacatcatggacaaacggaga
aactcttttgttggagagagtgggtatccctcaagtggggaggaaagataccaaccggca
catcagaggagcatcgtccgtccgaaacccatcaccatcccagtggatgcacagcctctt
cagaaagaaccggttgccacggtaacagcattaccaaatggtcacattacccaaatgatt
gacccgcgagacgtcggaggtcatcccatgcgacctgtgtaccctcgaacccagtacaac
actcagtacacttcaacgccccgcgtcaacgccggagatatacctcagtcaagctcaagc
cttatgtcacctgaatcaccaacccaatatgatcagcaagcaaacacattcgctgagtcg
acaagtggggtggtctcgtcagaggccttgaaggtttcactggggcgcacccccaatccg
ctgcggagttttgctctccctggccccccttccccaggagctaccccacccagacacata
gttaaaccacagcctaatcttagtccttacaagaagcccactccgcctatcacgaccgga
cccatcaagtctcggtcgcctctcccactgatcacctccaaagcaccggacgtgacgctc
aaagcggggaaatcgggaaaagaagacaatggcatggagaaatctctgagtaccgaggag
ctgacggcggagatggccaacttggaaggcctgatgaaagatctgaatgccatcacacaa
caggagtttgaatgctaa
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