Haliotis cracherodii (black abalone): 139461113
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Entry
139461113 CDS
T10814
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
hcra Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139461113
Enzymes [BR:
hcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139461113
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
139461113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
HA2_C
DEAD
AAA_22
HA2_N
Rad17
AAA_25
AAA_7
ResIII
Motif
Other DBs
NCBI-GeneID:
139461113
NCBI-ProteinID:
XP_071098755
LinkDB
All DBs
Position
Unknown
AA seq
1286 aa
AA seq
DB search
MTTSDDLSDSDSFLSKEKSSGHKNKRKHSKHKKSKRKHHERDRERERSPEYHDRHLSHTR
HRSSGEDKTYIDKSSRYRDGHPKDSRERDVDGSSRYRDVVPNASSRYRDKHHHDHEKPSQ
KCRQSFVELEKTRNISADKNSDVKSERVHETKYKDKDHHSKKTSLNSDSEEEQQDSDFDF
TQHKPSLNRIFFRDQDFIKRGTKEYDDFWAFLVKYQEFQRKKAAKKQSKSKTSTRQEDEG
RLGLPRTYDNRYRINLSLVSKDVELFLKKGRLVDYDVGRDLTRERVTKFKGILLHYLDFQ
QKQKFTKLKKIRSDQENLPIFQYKTMICGMVKRHQVVVVAGDTGCGKSTQVPQYLMEAGF
ENIACTQPRRIACISLSKRVGYETLNEYGSAVAFQVRFEKSKTRATKILFLTEGLLLRQM
TSDPYLKQYDVIVIDEVHERHIFTDFLLGVLKCMLTQREDLKLVLMSATINIELFSGYFE
NAPVIRVPGRLHPIELEYQPIKRDEMTSRGEKLDPTPYLRIMQTIDHRYPVTERGDLLIF
LSGMTEIMTIVEAANQYAQQTKRWIILPLHSALSVQEQDKVFDMSPEGVRKCIVSTNIAE
TSVTIDGVRFIVDSGKVKEMNFDPKYKMRRLQEFWISRASAEQRKGRAGRTGPGVCYRLY
ADTDYNSFQEYATPEIQRVTLDTLILQMMSLGLPDARRFPFIEAPEMSSIETSIAFLKEQ
GALTDDEALTPTGQMLSRLPVDVVIGKMLIMGSIFHMIDPVLTIAAAMSVQSPFTMKAHQ
DRDAIAARKPLESDHGDPFTLLNAADEWIQVKAEGRGTRKWCQRRGLEEQRFYEMNKLKR
QFRDLLKDHGLLDDVQEEERYYTSEERRQRHGERKRLGQLKREQNNESKKRKVLKFTEDD
YQLSDGDEDDKGNDIKDLEFRLSHDLSQLQETANKTRCFKLRDVNLLKVILCSGLYPQVA
LADDCNSYKGDSEQAFHTKNKAFILLHPTSVFASKPEVLRPSDIKDNKTTPSELRGRLSS
KHEVLAFVSILETNKPYLINTMRVPALQTITLFSNSIDANADCTRLVCDGWLEIRFPDAE
SADGVISSILHLRATWLNLLQVRLADTMSQMDDDHKKVGNKARRLEQLLARKLAEFLDSR
VTYSIRRVMAAEQQHLYVGMSTDSQDNKEHSVKGGTQVNSYLTVGCLLDDTSASVWGEYT
SHMQKVWECPRCHVSLIVSVVERLQHQMECQSADKPLSKDEEAAERESERASQLNPLRRS
YFCPDCDQQLSLTATEILKHKKSHKE
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaagcgacgatctcagtgattccgattcctttctgtctaaagaaaaatcttcc
ggccacaaaaataaacgtaaacatagtaaacacaagaagtcaaaacgtaaacaccacgaa
cgtgacagggaaagggagcgtagcccggagtaccacgaccgtcatttatctcatacaaga
catcgatcttcgggtgaagacaagacgtacattgacaaaagcagcagatacagagatggg
catccgaaagatagcagagagcgagatgtcgacggtagcagtagatacagagatgtggtt
cccaatgctagcagtagatacagagataagcatcatcatgatcatgagaagccttcccaa
aaatgtaggcaaagttttgttgaacttgaaaaaacaaggaatatttctgcagacaaaaac
agtgatgttaaaagtgaaagggtgcatgagacaaagtataaagacaaagatcatcacagt
aaaaaaacttcattaaattctgattctgaagaagagcagcaggactctgactttgatttc
actcagcataaaccatctttgaacagaatatttttcagagatcaggactttataaaaaga
ggaactaaagagtatgatgatttttgggcattcctggtcaaatatcaagaattccaacgg
aagaaggcagccaagaaacagtctaagagtaaaacatccaccagacaggaagatgaggga
aggcttggcctgccacgaacatacgacaaccgttaccgcatcaacctgtcactggtcagc
aaagatgtggaacttttcctcaagaaggggcgacttgttgactacgatgtgggtcgagac
ctgacccgggagagagtgaccaagttcaagggcatcctgcttcactacctggacttccaa
cagaaacagaagttcaccaagttgaagaagatccgttcagaccaggagaacttgcccatc
ttccagtacaagaccatgatctgtggtatggtgaagcgccaccaagtggtggttgtcgcc
ggggatacagggtgtggcaaatccacacaggtgccgcagtatctgatggaggcagggttc
gagaacatcgcctgcacacagccgcggaggatcgcctgcatctctctgtcaaagcgagtt
ggctatgagaccctcaacgagtatggctcagctgtagccttccaggtgcgctttgagaaa
agcaaaacaagagccactaaaatcctcttcctgacagaaggactgctgctgagacagatg
acatctgatccttatctgaaacagtatgatgtcattgtgattgacgaggtgcacgagcgt
cacatcttcacggacttcctgcttggtgtgctcaagtgcatgctgacacagagggaggac
ctcaagctggtgctcatgtccgccaccatcaacatcgagctcttcagcggctacttcgag
aacgccccagtcatacgggtcccagggcgtcttcatcctattgagttggagtaccagcca
atcaaacgtgacgagatgacaagtcgtggcgagaagttggatccgaccccgtacctccgc
ataatgcagacaattgaccaccggtacccagtcacagagcgaggtgatctgctgatattt
ttgagtgggatgacagagattatgactattgtggaggcagccaatcagtacgctcagcag
accaagagatggatcatcctgcccctccacagtgctctgtcggtccaggagcaggataag
gtgtttgacatgtctcccgagggagtgagaaagtgcatcgtatctacgaatatcgcagag
acgtcggtgaccattgacggggtccggttcattgtagactcaggcaaggtcaaggaaatg
aattttgaccccaagtataagatgcggcgtcttcaggagttctggatcagtcgagctagt
gcggaacagaggaagggtcgagcaggtaggaccggcccgggggtgtgctaccgcctgtat
gccgacaccgactacaactccttccaggagtatgccacacccgagatacagcgcgtcacg
ctggataccctcatcctccagatgatgtcccttggattacccgatgcaaggagattccct
tttattgaggctccagagatgtcaagcattgagacttccatagctttcctcaaggagcag
ggggctctgactgacgatgaggctttgactcctactggacagatgttatcgcggctacca
gtggacgttgtcatcggcaagatgctcatcatgggctccatcttccatatgatagaccca
gtgctgacgatcgcggctgccatgagtgtacagtctccgttcactatgaaggcccaccaa
gacagagatgctattgcagcccggaagcccctggagtcggatcacggagaccccttcaca
ctgctcaatgctgcagatgaatggatacaggtgaaggctgagggccgaggaacccggaaa
tggtgtcagagacgtggtcttgaggaacagaggttctatgagatgaacaaactcaagcga
cagttccgagacctcctgaaggaccatgggctgttggatgacgttcaggaggaggaacgc
tactacaccagcgaggaacgccgtcagcgccacggggagaggaagcgccttgggcagctg
aagagagaacagaacaatgagtccaagaagaggaaagtactcaagttcactgaggatgac
taccagctgagtgatggcgatgaagatgacaaggggaacgacatcaaggatctggaattc
cgactgtcacatgaccttagtcagctacaggagactgcgaacaagactcggtgtttcaag
ctgcgtgatgtcaacttgctcaaggtcatcctgtgcagcgggctgtacccacaggtggcg
ctggctgatgactgcaactcctacaagggcgactctgagcaagccttccatacaaagaac
aaggctttcatcctcctgcatcccacaagtgtgttcgccagcaagccagaggtgctacgt
cccagtgacatcaaggacaacaagaccacgcccagtgagctgagggggcggctcagcagc
aaacacgaggtcctggcatttgtttctatcctggagaccaacaagccttacctcatcaac
acaatgcgggtcccagcactgcaaactatcaccctcttctccaactccattgatgccaat
gctgactgcaccaggctggtgtgtgatgggtggctggagatccgattccccgacgccgag
tctgctgatggtgtcatatccagcatcctacatctccgcgccacctggctgaacctgctt
caagtccgcctggccgataccatgagtcagatggatgacgaccataagaaggtcggcaac
aaagcccggcgcctggagcagctccttgcacgcaaactggccgagttccttgacagtcga
gtcacatactccatacgtcgggtgatggcggccgaacagcagcacctgtatgtaggcatg
agtacagacagtcaagataataaggaacattcagttaaaggaggaacacaagtcaattct
tatttaacagttggctgcctgcttgatgatacctcggccagcgtgtggggggaatacacg
tcacacatgcagaaggtctgggaatgtccacgatgtcatgtcagcctgattgtgtcagtg
gtagaacggctgcagcatcagatggagtgtcagagtgctgataagcctttgtctaaagat
gaggaggctgcagagcgtgaatcagaacgagcctcacagctcaaccctctgagaaggtcc
tacttttgcccggactgtgaccaacagctttctttgacagcaacagagattctcaaacac
aagaaatctcacaaagaatga
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