Haliotis cracherodii (black abalone): 139462012
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Entry
139462012 CDS
T10814
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra04140
Autophagy - animal
hcra04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139462012
04148 Efferocytosis
139462012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcra04131
]
139462012
Membrane trafficking [BR:
hcra04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139462012
Hops complex
139462012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_Vps41
zf-rbx1
ACBP4_C
zf-RING_16
zf-C3HC4_2
zf-RING_11
zf-RING_2
zf-ANAPC11
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
139462012
NCBI-ProteinID:
XP_071099608
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MASILDQYEEESARQASGIRQSPAQSLQEPIGVGFIDARLETESPIFNKKKVNFKPPDII
THLDVCNNFLVMVMSSNIMLRLDLEHPDNPDEVEIPRAVDDKVHKIFLDPTGKHLIISMK
CGDNYYLSRNSKKPKPIAKLKGHLIDSVGWNWQNANEATTSAILLGTSKGIIFETELTAN
EDSRFFQGSLDQYLRQLKLATKPHEMFNLGREKAQSVTSLQFDRLPSTTMTEYRYYILAT
TPGRLYQFIGTVSTSAEPPMFMSLFQQYETGVETVQFLELPGDFGYSELHLFFPKFRQAA
TKFAWMTGPGIYYGDIDVTGAAGPNSVLSNAKLMPYPKEVDEKPAPPISMLLTEFHVLIL
YPDRLKAVCVLNEQLIYDDVYVERFGRLLGCCKDPIRGQVWTYTTTSVFKYKIVKEARDV
WQMYLDKGQFELAREYCKDNPSQLDKVLTKQAEYLFENRKYEASAAMYAETQNSFEEIAL
KFIRLPQKEALKTFVQKKLSALRPSDKTQMTMLVTWLIELYLNQLGELKEQGMDDSEDYM
RIQEQFRKFLGQTRVKETASNNRGVVYDLIASHGDVEDMVFFAVLMKDYERVISHHIQHE
NYKGALDVLKKQSEVELYYKFSPLLMQYTPKETVDAWMTQHKYLDPKQLIPALVQYDHHK
YREQGNEAIRYLEFCVHKLGNKDSPIHNYLLSLYAKLQSDQLMTYLNLQGEDVDDVSYDL
KYALRLCSEYGHKRACVHVYSLMGLYEEAVDMALSVDVELAKTQADKPDEDDIELRKKLW
LRIARHVVEEEKDIKRAMDFLHECDLLKIEDILPFFPDFVTIDHFKDAIITSLHEYNDHI
KSLKDEMEEATQSAEEIRKEIQSFRNKYAFVKAEDKCSSCSYPLMVRAFYLFPCQHKFHM
DCLIADVLPSLSGSKKSKVDQLQRKLAERDEAVPYRKSTSAAQLGVNRDAEVKAELDDLV
ASECIYCGDFMIRCIDKPFIEDDEWKSAEVEWE
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaatattggaccaatatgaagaagagtcagctcgacaagcttctggaatcagg
cagtcgcctgcacagagtctacaagaaccgatcggtgttggtttcattgatgcccgtcta
gaaacagaatcaccaattttcaacaagaaaaaggtcaactttaagccgccagacatcatc
acccatctggacgtgtgcaacaacttcctggtgatggtgatgagctccaacatcatgctg
cgcctggacctggagcaccctgacaaccctgacgaggtagagatcccacgtgccgtggat
gacaaggttcacaagatcttcctggaccccacggggaagcacctgatcatcagcatgaag
tgtggggacaactactacctctccaggaactccaagaaaccaaaacctattgccaaactc
aagggtcacttgatcgactctgtggggtggaactggcagaatgctaacgaggcaaccacc
agcgctatactgctaggcacaagcaaaggcataatatttgagacggagctcacagccaat
gaggacagtcgtttcttccagggcagcctggaccagtacctgagacaattaaagcttgca
acgaaacctcacgagatgttcaacttgggcagagagaaggctcagtcagtgacaagtctt
cagtttgaccgtcttccgtcgacgacgatgacggaataccgctactacattcttgctact
accccaggtcgtctgtaccagtttatcgggacagtgtccacatctgctgagcctccgatg
ttcatgtccctcttccaacagtatgagacaggcgtggaaacagtgcagtttcttgagtta
ccaggggactttggttacagtgagctacatctgttcttccccaagttccgccaggcagct
acaaagtttgcctggatgacagggcctggtatttactatggagatattgatgtcacagga
gcagcaggacctaactcagtcttgtccaatgctaaactcatgccctacccgaaggaggtg
gacgagaagccagcaccccccatatcaatgctgctcacagaattccatgtactcatcctc
tacccagacagattaaaagctgtgtgtgtgctgaacgagcaacttatttatgatgatgtg
tatgtggagaggtttggtagactgctgggttgctgcaaggatccaatccgtggtcaggtc
tggacctatacaaccaccagtgtgttcaagtacaagattgtgaaggaggcacgggatgta
tggcagatgtacctggacaaggggcagttcgaactggccagggaatactgcaaggataac
ccatctcagttggacaaggtgttaaccaagcaggccgagtacctcttcgaaaacagaaaa
tatgaagctagtgcggccatgtatgcagaaacacagaattcatttgaagagattgctctc
aagtttatccgacttccacagaaagaagccctcaaaacctttgtacagaaaaaactatct
gctttacgaccaagtgacaagacgcagatgacgatgctggtgacgtggctgatcgagctg
tacctcaaccagctaggggagctgaaggagcagggcatggacgactccgaggactacatg
cgcatccaggaacagttccgaaagttcctcggacagaccagggtcaaggagacagcctcc
aacaaccgtggggttgtctacgacctgatcgctagtcatggtgatgtggaggacatggtg
ttctttgctgtattaatgaaagactatgagagagtcatcagccatcacatccagcatgag
aactacaaaggtgctctggacgtgttgaagaaacagagtgaggttgagctgtactacaag
ttctctcccctgctgatgcagtatacgccaaaggaaacagtggatgcctggatgacccaa
cacaagtaccttgaccccaaacagcttatccccgctctggtgcagtacgaccatcacaaa
tacagggaacagggtaatgaagctatccggtacctggagttctgtgtgcacaaactgggc
aacaaggacagccccatacacaactaccttctgtccctgtacgccaagctgcagtcagac
caactcatgacctacctcaacctgcaaggggaggatgttgatgatgtgagttacgacctg
aagtatgcactgcgcctctgttccgagtatggccacaagagggcgtgtgtgcatgtgtac
tcactcatgggattgtacgaggaggcagtagacatggcactctctgttgatgttgagctg
gcgaagacccaggcagacaaacctgacgaggatgacatagaactgaggaagaagctctgg
ctgcggatagctcgacatgttgtggaggaagagaaggacatcaaacgtgccatggatttc
ctacacgaatgtgacctcctcaagattgaggacatcttgccattctttcccgactttgtc
accattgaccattttaaggatgccatcatcacatcactgcacgagtacaacgaccacatc
aagtcactgaaggacgagatggaggaggctacccagagtgccgaggagatcaggaaggaa
atccagagcttcagaaacaaatatgcctttgtgaaagcagaagacaagtgttcctcttgt
agctacccactgatggtgagggcgttctacctgttcccatgccagcacaagttccacatg
gactgtctgattgcagatgtgctgcccagtttgtcagggtccaagaagtccaaggttgac
cagttacagaggaaactcgcggagagggacgaggctgttccatacaggaagtccacatca
gcagcacagctcggggtcaatagagatgcggaggtgaaggcggagttggacgacttggtg
gcttcggagtgcatatactgcggagacttcatgatcaggtgtatcgataagccctttatt
gaagatgatgaatggaagtcagctgaagtggaatgggagtaa
DBGET
integrated database retrieval system
