Haliotis cracherodii (black abalone): 139463580
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Entry
139463580 CDS
T10814
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03018
RNA degradation
hcra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139463580
09123 Folding, sorting and degradation
03018 RNA degradation
139463580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139463580
03041 Spliceosome [BR:
hcra03041
]
139463580
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139463580
mRNA degradation factors
5'-3' decay
Lsm complex
139463580
Spliceosome [BR:
hcra03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
139463580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
139463580
NCBI-ProteinID:
XP_071100953
LinkDB
All DBs
Position
Unknown
AA seq
91 aa
AA seq
DB search
MAAPFSNPSQLLPLELVDKCIGSRIHIIMKNDKEIVGVLLGFDDYVNMVLEDVTEFESTP
EGRRVTRLDKLLLNGNNITMLVPGGEGPEMT
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcctttttcgaacccgtctcagttgttgccattagagctggttgacaaatgt
attgggtccaggattcacatcatcatgaagaatgacaaggagatagtcggagtgttgctg
ggctttgatgactatgtcaacatggttcttgaggatgtgacagaatttgagagtactccc
gagggacgtcgggtcacgcggctagacaagctgctcctgaatgggaacaacatcaccatg
cttgtgcctggaggtgagggaccggagatgacctag
DBGET
integrated database retrieval system
