Entry |
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Name |
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KO |
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Organism |
hcra Haliotis cracherodii (black abalone)
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Pathway |
hcra04141 | Protein processing in endoplasmic reticulum |
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Brite |
KEGG Orthology (KO) [BR:hcra00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139463984
04120 Ubiquitin mediated proteolysis
139463984
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139463984
04350 TGF-beta signaling pathway
139463984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:hcra04121]
139463984
Ubiquitin system [BR:hcra04121]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Cullin
139463984
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
Unknown
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AA seq |
771 aa
MAGKGQNPHGLKQIELDQIWDDLKSGIKSVYKRQSMSKHRYMELYTHVYNYCTSVHGQGS
GSQTQSRGPGGRKIKQPTSGAQFVGHELYKRIKEFLKNYLVNLLKDGQDLLDEQVLQFYT
RQWEDYQFSSKVLDGICAYLNRHWVRRECDEGTKGIYYIYSLALITWRDNLFKPLNKQVT
NAVLKLIEKERNGETINTRLVSGVINCYVELGLNEDEPSAKGPTLTVYKENFENPFLEDT
ERFYTRESTEFLRQNPVTEYMKKAETRLLEEQKRVQLYLHESTQDVLARVCEKVLIEKHL
EIFHYEFQNLLDTDKNDDLGRMYTLVSRIQDGLGELKSLLETHIYNQGQAAIERCGESAL
NDPKTYVQTILDVHKKYHALVMTAFHNDAGFVAALDKACGRFINNNSVTKMASSSSKSPE
LLARYCDLLLKKSSKNPEEAELEDTLNQVMVVFKYIEDKDVFQKFYSKMLAKRLVQHMSA
SDDAEASMISKLKQACGFEYTSKLQRMFQDIGVSKDLNETFKRSIQSTDPLDVDFSIQVL
SSGSWPFQQSCSFNLPVELERSFQRFTSFYSSQHSGRKLNWLYHMSKGEIVTNCFKNRYT
LQASTFQMAVLLQYNTEVSYNVQQLMEITQIKMDTLVQVLQILLKSKLLVADDDENNLQA
SSHLALFLGYKNKKLRVNINVPMKTEVKAEQESTHKHIEEDRKLLIQAAIVRIMKMRKVL
KHQHLLAEVLNQLSSRFKPRVPVIKKCIDILIEKEYLERVDGQKDTYSYLA |
NT seq |
2316 nt +upstreamnt +downstreamnt
atggcagggaagggacagaatcctcatggtctcaagcagattgagttggatcaaatctgg
gatgatctcaagtcggggatcaagtctgtttacaaacgacagagcatgtccaagcacaga
tacatggaactctatacgcatgtttataactactgcaccagtgtccatggccaggggtca
ggctcacagacacagtcacgggggcctgggggccgcaagattaaacaacccaccagtggg
gcacagtttgtcggacatgaactgtacaagagaatcaaggagttcctcaagaactatctg
gtcaacttgttgaaggatggtcaagaccttctagacgagcaggttctgcaattttatacc
agacagtgggaagattaccagttctccagcaaagtgcttgatggcatctgtgcctatctc
aaccgacattgggtgcggcgagaatgtgatgagggaaccaagggcatttattacatttat
tctcttgctttgatcacatggagagacaacctcttcaagcctctgaacaaacaggtgacc
aatgctgtccttaagctgattgagaaagagagaaacggggaaaccatcaataccagactt
gtcagtggtgtcataaactgctatgttgagcttggtctaaatgaggacgaaccaagtgct
aaaggacctacattaacagtgtacaaagagaactttgagaacccattcctggaagataca
gagagattctacacaagagagagcacagagttccttcgacaaaaccctgtcacagaatac
atgaaaaaggctgagacacggttgttggaggaacagaagcgggtgcaattgtacctccat
gagagtacacaggacgtgttagccagggtgtgtgagaaggtcctcattgagaaacatctg
gaaatattccattatgagttccagaatctgttggataccgataagaatgatgatttaggt
cgaatgtacacattggtatcacgtatacaagatggattgggtgagctgaagtccctcctc
gagacacatatctacaaccaaggacaggctgctatagaaagatgtggagagtctgcatta
aacgatcccaaaacttatgtacagacaatacttgatgtccacaagaaatatcatgctctg
gtcatgacagctttccacaatgatgctggctttgtggcagcattagataaggcatgtggg
cggtttatcaacaacaactcggtgacaaaaatggcaagttcttcaagcaagtctcctgaa
ttactggctcgatactgtgatctgctcttaaagaaaagctcaaagaacccagaagaagct
gaactagaagatacactgaaccaagtgatggttgtgttcaaatacattgaggacaaagat
gtattccaaaagttttacagcaagatgcttgccaagagattggtgcagcacatgtcagcc
agcgatgatgcagaggccagcatgatctccaagctgaagcaagcctgtggttttgaatac
acttcaaagttacaaagaatgttccaagatattggtgtcagcaaagatctcaatgaaaca
ttcaagaggtccattcagtcaacggatcctctggatgttgacttcagtatccaagtgttg
agttcagggtcgtggccattccagcagtcgtgtagcttcaaccttccagtggagttggag
cgaagtttccagagattcacatcattttatagcagtcaacacagtgggagaaagctaaac
tggttataccacatgtctaagggagaaattgtcacaaattgcttcaaaaacagatacaca
ctgcaggcatctacgtttcaaatggccgtcctgttacaatacaacacagaagtatcctac
aatgtacagcagctgatggagattacacagataaagatggacaccttagtgcaagtgttg
cagatcctcctgaaatccaaactcttggttgcggatgatgatgagaacaacctccaagca
tcatctcatctagcactcttcctcggatataaaaataagaaacttagagtgaacatcaat
gttcccatgaagactgaagtgaaggcagagcaagaatcgacacacaaacatatagaggag
gacaggaaactactcatacaggctgccatagtgagaatcatgaagatgcggaaagtccta
aaacaccaacacctactagcagaggtcctcaatcaactgtcctctcgcttcaagcccaga
gtgcctgttattaagaaatgtattgacattctgatagaaaaagagtacttagaacgagtt
gatggacaaaaggacacttacagttaccttgcttag |