Haliotis cracherodii (black abalone): 139463993
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Entry
139463993 CDS
T10814
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra04140
Autophagy - animal
hcra04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139463993
04148 Efferocytosis
139463993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcra04131
]
139463993
Membrane trafficking [BR:
hcra04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139463993
Hops complex
139463993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
Motif
Other DBs
NCBI-GeneID:
139463993
NCBI-ProteinID:
XP_071101576
LinkDB
All DBs
Position
Unknown
AA seq
829 aa
AA seq
DB search
MATADWSPLGTIYYRKCELYTMEWSGLVDLSKCTVAAAPYGGPIALMRDESKSGRVTTNV
KPIISVYNTAGKLLSQLRWNSGHVIQIGWTVTEELLCVQDDGVVLVYDIFLNFKRTFGMG
QEAKDVKLLDCKIFNSFQGTGIAVMTTAFRIFLITNAEDPRVRKLAEVPGLNSLPSSWTI
INIERKSLALVAKNDQLFLVDHGGQYQEQSPEVESEVEAYVGMALSFNNKYLALFTQTGM
IWIGSSDLQKCYCEFNTKSKSPPNQLAWCGNGAVVAMWDRLMVVVGPDKDWIKYNFDSPV
SLVQEEDGLRIFGDDIHEFLQKVPAVTEQIFKIGSMEPGAMLFEASREFQKRSQKADEYV
RMIKDKLDIAVDQCIEAAGNEIEPNKQRLLLRAASFGKCFLTDYRPEAFVNMCQMLRVLN
QVRHHSVGIPLTYVQLEHLSMSVLIDRLVLRKFFCLAIKICQYLKIPDAEGTSRILAHWA
CYKVQQKHEEEDTLAKAISQKLLDVPGVSFSEIASQALDQGRKQLAIKLLEYEPKASEQV
PLLLKMDQDHTALGKAIDSGDSDLVYTVLLRLKEKLQSSGDFLMTIRTMPIAYSLYIQFC
KQQNPKLVEDLYYQEDNFLDNGNCKVVRSFQEEMLDDRLKRLEDAQNCYSRAKNDFAAKQ
TEDQIKLLKFQRRLEEEHNKPYVDLSLHQTIYKLTVEQINKPAEQLRKEFKVPEKRYWLL
RINALAEAGDWGELEKFSRTKKPPVGMEVFVEACVKLHNKQEAHRYMNRVTPDKKVKCLI
KLGNLKAAAEAAFENRNEDELNSVLSRVSLADKQLAESIRAMRNELGKK
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcggattggagtcctcttggtactatatattacagaaaatgcgagttatac
actatggaatggagtggtctggtggacctgtcaaaatgtaccgtggcggcagcaccatac
ggaggacccatagctctcatgagagatgagagcaagtctggcagggtgacaacaaacgtc
aaacccatcatcagtgtttacaatactgcagggaaacttctcagtcaactgaggtggaac
agtggccacgtgatacagataggttggacagtgacggaggagctgctgtgtgtgcaggac
gatggagttgtgttggtgtatgacatcttcctcaacttcaagaggacatttgggatgggc
caggaagcaaaggatgtgaaacttttagactgcaaaatattcaacagtttccaaggcact
ggaattgctgtcatgacgacagcatttcgaatattccttatcaccaatgctgaagatccc
cgtgtcaggaagctggcagaagtcccaggactgaattctctacccagtagctggaccatt
atcaacatagagaggaagtctctagccctggttgccaagaacgaccagctcttccttgtg
gatcatggggggcagtatcaggagcagtcgccggaggtggagtccgaggttgaggcgtac
gttggcatggctctgtccttcaacaacaagtacctggctctcttcacacagactgggatg
atatggatcggctcctcagacttacagaaatgttattgtgaattcaacaccaaatccaag
tccccgccaaatcaactcgcatggtgtggcaacggtgctgtggtagcgatgtgggacagg
ctgatggttgtggtcggaccagataaagactggatcaaatacaactttgacagcccagtc
tctctagtacaggaggaagatggactgaggatattcggggatgatattcatgagtttctc
cagaaagtgccagccgtgacagaacaaatcttcaagatcggatccatggagccaggggcc
atgttgttcgaggcatccagggaattccagaaacgcagccagaaagctgatgaatatgtg
aggatgatcaaggacaaactggacattgcagtggaccagtgtattgaggcagcggggaat
gagattgaaccaaataaacagagattactgctgagggctgcttcatttggtaaatgcttc
ttgacagactaccgaccggaggcgtttgtcaacatgtgtcagatgctacgagtgttgaac
caagtcagacatcactctgtgggtattccgctcacatacgtacaactggagcacttgtca
atgtcggtgctaatagatcgactggttctccggaagttcttctgtctggccatcaagatc
tgtcagtatctgaagatcccggatgcagagggtaccagcagaatactggcgcactgggcc
tgctataaggtgcagcagaagcatgaggaggaggacaccctggctaaagccatctcccag
aagctgctggatgtcccgggggtctccttctccgagattgccagccaggctctggaccag
ggtaggaagcagctagccatcaagctgctggagtatgagccaaaggcatcggagcaagtg
cccctgctgctgaagatggatcaggatcacacagctctgggcaaggccattgacagtgga
gacagtgatttagtgtatacagtgctgttacgactcaaggagaaacttcagagcagtggt
gacttcctcatgacgatccgaaccatgcctattgcctactccctctatatacagttctgc
aagcagcagaaccccaagctggtggaggacctgtactaccaggaggacaactttctggac
aatggcaactgcaaggtcgtcaggagcttccaggaggagatgctggatgacagactgaag
cgactggaagatgctcagaactgctacagcagggccaagaatgactttgctgcaaagcaa
acagaggaccagatcaagctgctcaagttccagcggcgcctcgaggaggagcataacaag
ccgtatgtggacctgtccctccaccagaccatctacaagctgacagtggagcagatcaac
aagcccgcggagcagctacgcaaggagttcaaggttccagagaaacggtactggctgctg
cgtatcaatgccctggcagaggcgggagactggggcgagctggagaagttctcacggacc
aagaagccccctgttggtatggaggtatttgttgaagcttgtgtcaaactacacaacaag
caagaagctcacagatatatgaaccgggtcactccagacaagaaggtcaagtgtctcatc
aaactggggaacctgaaggcagctgctgaagcagcatttgagaaccgaaacgaggacgag
ctgaactcagtgctgtctcgtgtcagccttgcggacaaacagttggcggagtccatccgc
gccatgaggaacgaactgggcaagaagtaa
DBGET
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