Haliotis cracherodii (black abalone): 139464581
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Entry
139464581 CDS
T10814
Name
(RefSeq) general transcription and DNA repair factor IIH helicase/translocase subunit XPB-like isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03022
Basal transcription factors
hcra03420
Nucleotide excision repair
Brite
Enzymes [BR:
hcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
139464581
Transcription machinery [BR:
hcra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
139464581
DNA repair and recombination proteins [BR:
hcra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
139464581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139464581
NCBI-ProteinID:
XP_071102202
LinkDB
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Position
Unknown
AA seq
795 aa
AA seq
DB search
MGGSKKDKRDKGERSSKRAKVVEVEYDDFDDESQETDNVKDIATVASKQVEERSAEDEFG
AKDYRKLLELKLDHNSRPLWVAPNGHVFLESFSPVYKHAHDFLIAISEPVCRPLHIHEYK
LTAYSLYAAVSVGLETNDIIEYLRRLSKTSLPNGIIEFIKLCTLSYGKVKLVLKHNRYFV
ESQHPDVLQKLLKDPVIQECRKRDDAEEDATAEGFIKGEVSGKSALHLNRPATTAAGSSS
QPDQTATGAEGETATEEDKVPDDIFDYYDKLDKEEDDEDDNQLKTVSFEVMQERVEDVQK
RCIELEHPLLAEYDFRNDTVNPDVNMDLKPSTVLRPYQEKSLRKMFGNGRARSGVIVLPC
GAGKTLVGVTAACTVRKRCICLCTSGVSVEQWRSQFKMWSTVDDSLICRFTSDAKDKPMG
CAICISTYSMLAHSMKRSWEAEKMMEWMQSQEWGIMLLDEVQTIPAKMFRRVLTIVNAHC
KLGLTATLVREDDKIADLNFLIGPKLYEANWMELQNAGYIARVQCAEVWCPMAPEFYREY
LQMKSMKKLLLYCMNPNKFRACQFLIRYHERRNDKIIVFADNVFSLKHYAIKLNKPYLYG
PTSQGERLQILQNFVHNPKVNTIFVSKVADTSFDLPEANVLIQISAHGGSRRQEAQRMGR
ILRAKKGSAAETYNAFFYTLVSQDTMEMQYSLKRQRFLVNQGYSYKVITKLAGMDQEELA
YSTKEEQMSLLQKVLAATDQDAEEEGGPDGGRPGVFRKAGSMSSMSGADDSVYMEYKRGG
LKSAALHPLFKRFRR
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggggggaagtaaaaaggacaagcgtgataaaggagagagatcctcgaagagggccaaa
gtcgttgaagtagaatatgatgactttgatgatgaatcccaggaaacagataatgtcaaa
gacatcgcaacagttgcatctaagcaggtggaagaacgaagtgcagaagatgaatttggt
gccaaagattatcgcaagctccttgagctgaaacttgaccacaactcgcgacccttgtgg
gtggcacccaatgggcatgtgttcctggaatccttctcccctgtgtacaaacatgcccat
gacttcctcatcgccatatccgagccagtgtgtcgaccgctccacatacatgagtacaag
ctgacggcctactccctgtatgcagctgtctctgtgggcctggagacaaatgacatcatt
gagtatctccgccgactcagcaaaacatccctccctaacggaatcattgagtttataaag
ctgtgcactttgagttacgggaaggtgaagctggtcctgaagcacaacagatactttgtg
gagagccagcacccagatgtcctccagaagctgttgaaggatcctgtcatccaggagtgt
cgcaagcgggacgatgcagaggaggacgccactgccgagggctttatcaagggagaggtg
tcggggaagtcagcactacatttgaacaggccagcgacgacagccgcagggtcatcatcg
cagccagatcagacagcaacaggggcggagggggagacggcaacggaggaggacaaggtg
ccagacgatatatttgactactacgacaagctggacaaggaagaggatgatgaggatgat
aatcaactcaagactgtgtcctttgaggttatgcaggagcgtgtggaggatgtgcagaag
cggtgtatagagctggagcatcctctgctggcagaatatgacttcaggaatgatacagtc
aacccggatgtgaacatggatctgaagccgtccacagttctgcgaccctaccaggagaag
agccttcggaagatgtttgggaatggcagggctaggtcaggagtcattgtgctaccctgt
ggtgccggtaagactctggtcggggtgacggctgcctgtactgtgaggaaacgctgcata
tgtctgtgtacatcaggagtgtcggtggagcagtggaggtcacagttcaagatgtggtct
acagtagatgacagtctgatctgtaggttcacctcagatgccaaagataaaccaatgggc
tgtgccatctgcatcagcacctactccatgttggcgcactccatgaagcggtcgtgggag
gcggagaagatgatggagtggatgcagagccaggagtggggcatcatgctccttgatgag
gtacagacaattccagccaagatgttccgacgggtgctgaccattgtcaatgcccactgc
aaactgggactgaccgccacactggtccgtgaggatgacaagattgctgacctcaacttt
ctgatcggccccaagctgtacgaggctaactggatggaactgcagaatgccggctacatt
gcccgtgtacagtgtgctgaagtctggtgtccaatggcgcctgaattctacagagaatat
ctacagatgaaatcaatgaagaaactgctgctgtactgcatgaatcccaacaagttcagg
gcctgtcaattcctcatccgctaccacgagaggaggaacgacaagattatcgtgtttgct
gacaatgtgttttctctcaagcattatgctatcaaactcaataaaccctacctgtacggc
ccgaccagccagggggagagactgcagattctccagaactttgtgcacaaccctaaagtc
aacacaatctttgtgtcaaaggttgcagatacttcatttgacctgccagaggcaaacgtc
ctcatccagatatccgctcacggaggatcccgaagacaggaggctcagaggatgggcagg
attctgagggcaaagaaaggttcagcagcagagacgtataatgcctttttctacacgctg
gtgtctcaggacaccatggagatgcagtactccctcaagcgtcagcgcttcctcgtcaac
cagggctacagctacaaggtcatcaccaagctggctggcatggaccaggaggagctggcc
tacagcaccaaggaggagcagatgagtctgttgcagaaggtgctggccgccacagaccag
gatgcagaggaggaaggagggccagatggcggcagaccaggggtgttccgcaaggctgga
agcatgagctccatgtcaggagcagatgactcggtgtacatggagtacaagagagggggc
ctcaagtccgcagccctacatccactcttcaagcggttcaggagatga
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integrated database retrieval system
