Haliotis cracherodii (black abalone): 139464968
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Entry
139464968 CDS
T10814
Name
(RefSeq) ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03040
Spliceosome
Brite
Enzymes [BR:
hcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139464968
Spliceosome [BR:
hcra03041
]
Complex C
Other components
Step II factors
139464968
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
HA2_N
GIPC1_GH2
DEAD
AAA_22
AAA_19
ABC_tran
nSTAND3
AAA_16
TsaE
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
139464968
NCBI-ProteinID:
XP_071102707
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MDELQKLEYLSLVSKVCTELENHLGINDKDLAEYVIDLAEKHDTFEKFKKALDERDAQFS
DSLIANLLRLIKKMKPKVKEPEIADEKSASDETDMRKALYPGLAMPNNPEVRKMLDGEVS
AKQVEVKTEVVTEENGKGWGRGGDQKVASQMMDELEALLGGKLPVKEETRTEKAEKKRRK
SRSRSRSREKKKKKRDRDRSRERRRSRSRSRDRHRSRSRSRERRRRSRSRDRDRHRDKER
DRDRDTKKRDRDRDKTRDKDKYNDIPMEPVVAQVYHGKVTTIMQFGCFVQLEGLRKRWEG
LVHISQLRREGRVTNVSDVVSRGQKVLVKVLSFTGNKTSLSMKDVDQDTGEDLNPTRSRN
IGGDVGGDDIEARNPDRPSTIPLVDAPENDDLSTDRKTFKRISSPERWEIKQMMAASCID
KSQLPDFDEEVGLLPKEDDSDEDVEVELVEEEPPFLQGHGRHWVDLSPVKIVKNPDGSLA
QSAMMQSALQKERRELKQAQREAEMDSVPAGLNNHWIDPMPESDGRKLAANMRGVGMAPN
DVPEWKKHITGGAKASYGKKEKKSLLEQRQSLPIFKLKDELSKAVNDNQILIVIGETGSG
KTTQITQYLAEVGYTTRGKIGCTQPRRVAAMSVAKRVSEEFGCRLGQEVGYTIRFEDCTS
PETKIKYMTDGMLLRECLIDPDLVQYSIIMLDEAHERTIHTDVLFGLLKAAVKKRPELKL
IVTSATLDAVKFSQYFFEAPIFTIPGRTYPVEILYTKEAETDYLDASMITVMQIHLTEPP
GDILLFLTGQEEIDSACEILYERMKAMGPEVPDLIILPVYSALPSEMQTRIFEPAPPGSR
KVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGMDQLIVTPISQAQAKQRAGRAGR
TGPGKCYRLYTERAYRDEMLPTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMQT
LISAMEQLHALSALDDEGLLTRLGRRMAEFPLEPMLSKMLIMSVHLTCSDEILTIVSMLS
VQNVFYRPKDKQAIADQKKAKFHQPEGDHLTLLAVYNSWKNNRFASPWCYENFVQIRTLK
RAQDVRKQMLGIMDRHKLDVVSCGKNTARVQKAICSGFFRNAAKKDPQEGYRTIVDSQVV
YIHPSSALFNRQPDWVVYHELVLTTKEYMREVTAIDPKWLVEFASKFFKFSDPTKLSRQK
KQQKIEPLYNKYEEPNQWRISRAFRKFHTKVTF
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctacagaagctggagtatctgtctttggtgtccaaagtatgcacagagtta
gaaaaccatcttgggataaatgataaagatttggctgaatatgtgattgatctcgctgag
aaacatgacacatttgaaaaattcaagaaagccttggatgaacgagatgcacagttctca
gactctctcattgctaatcttctacgtcttatcaagaagatgaagcccaaggtgaaggag
cctgagatagctgatgagaagagcgcctctgatgagacagacatgaggaaagctctgtat
cccggcctggcgatgcccaataatccagaagtcaggaaaatgcttgatggagaggtgagc
gcaaagcaggtagaagtgaagactgaggtggttacggaggagaacggcaagggctggggt
cgaggtggagatcagaaagtggcttcacagatgatggacgagctggaggcgctcctcggg
ggcaagttgccggtcaaggaggagacaaggacagagaaggcagaaaagaaaaggagaaaa
agtcgaagtcgaagccgcagtagagagaaaaagaaaaaaaaacgtgaccgagatcgatct
cgtgagagacgaagatccaggagtaggtcacgtgatcgtcatcgttcccgtagtcggagt
cgagagagacgtcgccggtccaggagtcgagacagagatagacacagagacaaagaaagg
gacagagatcgagatacaaagaagcgagaccgagatcgagacaaaactagagataaagac
aagtacaatgacatcccaatggagccagtggtggcacaggtgtaccatggcaaggtgacg
acgatcatgcagtttggatgttttgttcaactggaaggtctgaggaagagatgggagggt
cttgtacacatatctcagctgcgccgagaagggagagtgaccaacgtgagcgatgtggtc
agtcgaggccagaaggtcctggtcaaggtgctgtccttcaccggcaacaagacgagtctg
tccatgaaggatgttgaccaagacacaggggaggacctcaaccccaccaggagtcgcaac
atcggcggcgatgttggaggagatgacattgaggcccgcaaccctgacaggccgtccaca
ataccgctcgtggatgctcctgagaatgatgacctctctacagacaggaagacgttcaag
cgaatctcatcgccagagcgatgggagatcaaacaaatgatggcggctagctgtatagac
aagtcacagctgcctgactttgacgaggaagtcggactgctgccgaaggaggatgactca
gatgaggatgtggaggtggaactggtagaggaggaaccgcccttccttcagggtcatggt
cggcactgggtcgacctcagtcctgtcaagattgtcaagaatcctgatggttctctggcg
cagtcggccatgatgcagagtgcgctacagaaggagcggagggagttgaagcaggcgcag
agagaagcggagatggactccgtcccagccggactcaacaaccactggatcgaccccatg
cctgaaagtgatggacgaaagctggctgcgaacatgcgtggtgtggggatggccccgaac
gacgtccctgagtggaagaaacacatcacggggggcgctaaggcgtcgtacggcaagaag
gagaagaagtccctcctggaacagcggcagagtctgcccatcttcaagctgaaggacgaa
ctctccaaggcggtcaatgacaaccagatactgatcgtgattggagagactggttcaggg
aagacaactcagatcacacagtacttggctgaggtgggctacaccacgagggggaagatt
ggctgtacacaacccaggagagtggcagccatgtcggtggccaagcgagtatcagaggag
tttggttgccgtctcggacaggaggttggctacaccattcgttttgaggactgtacgagc
cccgagacgaagatcaagtacatgacagatggtatgctgctgcgagagtgtctgatcgac
cctgaccttgtccagtactccatcatcatgttggacgaagcccatgagaggaccatccat
acggatgtcttgttcggacttcttaaagctgctgtgaagaaaaggccggagttgaagttg
atagtgacgtcggccacccttgatgctgtcaagttctcacagtacttctttgaagctcca
atcttcacgatccccgggcgaacatacccagtggaaatcctgtacaccaaagaggcagag
actgactacctggacgcatccatgatcaccgtcatgcagatccacctgacagaacctcca
ggcgacatcctgctcttccttactggtcaggaggagatcgactccgcatgcgagatcctc
tacgagcggatgaaggccatgggtcccgaggtacccgacctcatcattctccccgtgtac
agcgccctgcccagcgagatgcagaccagaatcttcgaaccggcgccacctggatccagg
aaggttgtcatagcaaccaacattgcggagacgtcgctgacgattgatggcatttattat
gtggtggatcccggctttgtgaaacagaaggtgtacaactccaagacgggcatggatcag
ctgattgtcacgcccatctcacaggcccaggccaagcagcgtgcaggccgagccgggcgg
accggtccggggaagtgttaccgtctgtacacggagcgagcctaccgagacgagatgctg
ccgaccaacgtcccggaaatccagcgcaccaacctggcctccaccgtgttgtccctgaag
gccatgggcatcaatgacctcctgtcctttgacttcatggacgcgccacccatgcagacg
ttgatatcggccatggagcagcttcatgccctcagtgctctggacgatgaaggattgctg
accaggctgggccggaggatggccgagttccccctggagcccatgctgtccaagatgctg
atcatgtccgtccacctcacctgcagcgacgagatcctcaccatcgtctccatgctgtct
gtacagaacgtcttctacagacccaaggacaagcaggctatagctgaccagaagaaggcc
aagttccaccagccagagggggaccacttgactctgttggccgtgtacaattcctggaag
aacaacaggtttgccagcccgtggtgctacgaaaacttcgttcagatccggacactcaaa
cgagcgcaggacgtccgcaaacagatgctgggaatcatggacagacataagctggatgtg
gtgtcatgtgggaagaacacggcgcgggtacagaaggccatctgttcaggtttcttccgc
aacgcggccaagaaggacccacaggaaggctacaggacgatagtggacagccaggtggtg
tacatccacccctccagtgccctcttcaacagacagcctgactgggtggtgtaccatgag
ctggtcctcactaccaaggagtacatgagagaagtgacggccatcgaccccaagtggctg
gtggagttcgcctccaagttcttcaagttctccgaccccaccaagctgagccggcagaag
aaacagcagaagatcgagcccctctacaacaagtacgaggaacccaaccagtggagaatc
tcacgcgctttcaggaagttccacaccaaagtcaccttctag
DBGET
integrated database retrieval system
