KEGG   Haliotis cracherodii (black abalone): 139465001
Entry
139465001         CDS       T10814                                 
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
hcra  Haliotis cracherodii (black abalone)
Pathway
hcra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hcra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139465001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hcra03041]
    139465001
   03036 Chromosome and associated proteins [BR:hcra03036]
    139465001
Spliceosome [BR:hcra03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    139465001
 Complex B
    139465001
 Complex C
   U2 SnRNP specific factors
    139465001
Chromosome and associated proteins [BR:hcra03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    139465001
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT Htt_N-HEAT_1 HEAT_2 Vac14_Fab1_bd XMAP215_CLASP_TOG UME DUF2298 UNC45-central
Other DBs
NCBI-GeneID: 139465001
NCBI-ProteinID: XP_071102762
LinkDB
Position
Unknown
AA seq 1336 aa
MAATTREEIEEQVRSIQAKKAQLTTVQTKEDDCERVGLGAEGHYDVDIYDSNKFSGYVTS
IAATDEPDDYEDVGAAFPKRSSYTAPLNLLHETANDKDYDPLADHRVAKIADRETEYQAR
RRQMIISPERYDPFADGGKTPDPKLQARTFSDVMTELQLGKEQAGLRQQMHEKAKAGELR
AVNGAGGDAGHKQPTKRKRWDQSSAQEDAPTKKKTSSWDAAEAITPSNSRWDETPGRAKG
EQTPGATPGQSTRQWDSTPGHATPGATTPGRDTPGHQATPSARRNRWDETPKTERDTPGH
GSGWAETPRTDRGGDLIETTPTPGASKRRSRWDETPGATPGGMTPNMTPGGMTPTMTPGG
HTPTMTPGGMTPGQTPGGHTPGGFTPSGATPTGQKAMAMATPTPGHLMSMTPEQLQAYTW
QREIDERNRPLSDDELDSMFPPGYKVLNPPAGYIPIRTPARKLIATPTPMAGTPGFRMQT
PDSKTQIVDMQPKGNLPMMKPDDMQYFDKLLVDVDEESLTPEEQKERKIMKLLLKIKNGT
PPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVR
PYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTT
ARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLKNLVE
IIEHGLVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLK
AIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPQYIKD
EILPAFFKHFWNQRMALDRRNYRQLVDTTVEIANKVGAAEIVGRVVDDLKDEAEQYRKMV
METIEKIMSNLGAADIDSRLEEQLIDGILYSFQEQTTEDVVMLNGFGTVVNALGKRVKPY
LPQICGTILWRLNNKSAKVRQQAADLISRIAIVMKTCQEEKLMGHLGVVLYEYLGEEYPE
VLGSILGALKGIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAE
FVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQN
RVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFMFEYIGEMGKDYIYA
VSPLFEDALMDRDLVHRQTSMAAIQHMALGVYGFGCEDALTHLLNYVWPNIFETSPHVVQ
AFMGAVEGLRVAIGPSKILQYAMQGLFHPARKVRDVYWKVYNTVYIGAQDGMIPAYPRIP
NDAKNQYIRYELDYIL
NT seq 4011 nt   +upstreamnt  +downstreamnt
atggcagcgacaacaagagaagagattgaagagcaggtgagaagtatccaggccaagaaa
gcacaactaacaacagtccagacaaaggaagatgattgtgaaagagttggacttggagca
gaaggacattatgatgttgacatctatgattcaaacaaattttctggatacgtaacttcg
attgctgccacagatgaacctgacgactatgaagatgtaggagcagcatttcctaagcgg
tcaagctacactgcaccgttaaacttacttcatgaaacagcaaacgacaaggattatgat
ccgctggctgatcatcgggtggcgaagattgctgaccgcgaaactgaataccaagccaga
cgacgtcagatgatcatttcgcccgaaagatatgatccatttgctgacggaggcaaaaca
cctgatccaaagcttcaagcaagaaccttctcagatgttatgacagaattgcagctcggc
aaagaacaggccgggctgcgtcagcagatgcacgagaaggctaaggctggtgaactgcgg
gccgtcaatggagctgggggtgatgcagggcataaacaacctacaaagaggaaacgctgg
gaccagtcctccgcccaggaagatgctcctaccaagaagaaaacctcgtcatgggatgcg
gcagaagccattaccccatcaaacagcagatgggatgaaactcctggtagagccaaaggg
gaacagacccctggtgcgaccccaggccagagcaccagacagtgggattctaccccagga
cacgccacccctggtgcgaccacacccggtagagacacgccaggccaccaagccacgcca
agtgctcgaaggaatagatgggatgagactcctaaaacggagagagacacccctggtcat
ggcagcggttgggcagagacccctcgaacagacagaggtggtgatttgatcgagaccaca
ccaacgccaggggcaagcaaacgtcgttcacgatgggatgagaccccaggagccacgcct
ggtgggatgacccctaacatgaccccagggggaatgacccctaccatgacccctggaggt
cacacacccaccatgacacctggagggatgactcctggacaaactcctggcggtcacacc
ccgggcggcttcactcccagcggtgccacacccactggtcagaaagccatggccatggcc
actccaacccctggccacctcatgtccatgaccccggaacagttgcaggcgtacacatgg
cagagggaaatcgatgaaagaaatcgacctttgtctgatgacgaactggactcaatgttc
ccacctggctacaaggtgctgaatccaccggcaggctatatacctatcagaacaccagcc
aggaagctgattgccacccccaccccgatggctggcacccctgggttccgaatgcagacc
ccagactccaagacacagattgttgacatgcagcccaagggcaatctgcctatgatgaag
ccggatgatatgcagtactttgacaaactattggtggatgtagacgaagagtcgttgacg
ccagaggaacagaaggagaggaagatcatgaagctgctcctcaaaataaagaatggcacg
ccaccaatgagaaaggctgctctgcgtcagatcacagacaaggcccgcgagtttggtgct
ggtcccctgtttaatcagatcctaccactgttgatgtccccgaccttggaggatcaggaa
cgtcacttgctagtgaaggtcattgaccgaatcctgtacaagctggacgatctggtccga
ccctatgtacacaagatccttgtggtcattgagcctctgctcattgatgaggactactat
gcccgtgttgaagggagagaaattatctcaaacttggcgaaggccgctggtcttgccacc
atgatctccacaatgagacccgacattgacaacatggacgagtatgtccgtaacaccact
gctcgagcctttgccgttgtggcctctgctcttggcatcccatctctcctgcctttcctg
aaggctgtgtgcaagagtaagaagtcctggcaagccagacatactggtatcaagattgta
cagcagatagccatcctcatgggctgtgccatacttcctcatctcaagaatttggtcgag
attattgagcatggcttggttgatgagcagcagaaagtacgaaccatcactgccctggct
ttggctgctttggctgaagcggccacgccctatggtattgaatcttttgacagtgtcctc
aaacctctctggaagggtatacgtcaacacagaggaaagggtctcgctgccttcctgaag
gctattggctacctgatccccctcatggatgctgagtacgccaactactacaccagggaa
gtgatgttgatcctcatccgagagttccagtctcctgatgaggaaatgaaaaagattgta
cttaaggtggtgaagcagtgctgtgcgaccgatggtgttgaaccccagtacatcaaagat
gagattctaccagctttcttcaagcacttctggaaccagagaatggctcttgataggaga
aactacagacagctggtggacacaacagtcgagattgccaacaaggttggtgcagcggag
attgttggacgcgtcgttgatgacctgaaggatgaggctgagcagtaccgtaagatggtg
atggagaccattgagaagatcatgtcgaatcttggtgccgccgatattgattcacgtctt
gaagaacagctgattgacggtatcctgtactccttccaggaacagaccacggaggatgtg
gttatgttgaatggtttcggcacagtggtgaatgcgctgggcaagcgggtgaaaccctat
ctcccccagatctgtggtaccatcctctggcgtctcaacaataagtcggccaaagtccga
caacaggcggctgatctcatctccaggatagccattgttatgaaaacttgtcaggaggag
aaactgatgggccatttgggtgtggtgttgtacgaatatttgggagaagaataccccgag
gttctcggctcaatcctgggagctctcaagggcattgttaatgtcatcgggatgaccaaa
atgacacctccaatcaaggatctcttgccaaggctcacaccaatcctcaagaacagacac
gagaaggtacaggagaattgtatcgacctggttggccgtatcgctgaccgcggagcagag
tttgtgtctgctagggaatggatgagaatctgctttgagctgctcgagttactcaaggcc
cacaagaaggccatcaggagagccactgtcaacacctttggctacattgccaaggctatt
ggtcctcatgacgtgttggcgaccctcctcaacaacctaaaggtgcaggagagacagaac
agagtgtgtacgacagttgccatcgccattgtagcggagacatgttcccccttcactgtg
ttgccagccctgatgaatgagtaccgcgtgcccgagctgaatgtccagaacggtgtcctc
aagtctctgtccttcatgtttgaatatatcggagaaatggggaaggactacatctatgct
gtgtcacctctgtttgaagatgccctcatggacagagatctggtgcatcggcagacgtcc
atggcagcaatccagcacatggctcttggtgtgtacggctttggatgcgaggatgcactc
acccatctcctcaactatgtctggcccaacatcttcgaaacctcccctcatgttgtgcag
gctttcatgggggctgtggaaggcctcagagtggccattgggccgtcaaaaatactccag
tatgccatgcagggcctattccatcctgctcgcaaggttcgtgacgtctactggaaggtg
tacaacacagtgtacattggggcacaagacggcatgattccagcctatcccagaatcccc
aacgatgccaagaaccagtacatccgatatgaactggactacatcttatag

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