Haliotis cracherodii (black abalone): 139465640
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Entry
139465640 CDS
T10814
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
139465640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcra04131
]
139465640
Membrane trafficking [BR:
hcra04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139465640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
Clathrin
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
WD40_CDC20-Fz
TPR_VPS8_2
Beta-prop_WDR5
zf_RING_Vps8_fungal
WD40_Prp19
Beta-prop_WDR3_1st
WDR55
Beta-prop_THOC3
zf-RING_Vps41
ANAPC4_WD40
Beta-prop_EML
EIF3I
zf-C3HC4
Beta-prop_EML_2
Beta-prop_DCAF4
WD40
zf-RING_UBOX
zf-RING_5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
zf-rbx1
PHD_NSD
Beta-prop_SPT8
Beta_prop_At2g24240
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
139465640
NCBI-ProteinID:
XP_071103447
LinkDB
All DBs
Position
Unknown
AA seq
1398 aa
AA seq
DB search
MADELRSATDVSSNLINFDIDELDDAELDLPAVENTPTLESILNEPDETSSVLDEDEIPP
SAIQLFKADSGETSSISSQDSYLNDRPRQRRDRGKKISKPIHGSVLKPSKLKNISAQILS
AADRVDAGMPTAITVSSLIAIGTSHGLVLVFDPKQVLKWCLGSTAVGAQYGAVSSLSFNK
DCTRLLSGFAKGQITMWDLTTGKLLRTITDAHPQGTAVLHVEFTDSFVLAVCSDSGGSVF
ELEFKRLIGVRTCESQCLFSGSRGEVCVIEPLHMNLTIKDHPMQDVMVLAMASLSKVLLV
TLRPTLKVMFTHPLKGDPSTLPLLAWQFVIIQVSERDRVIDPVLVFARDQTIYFYQVICH
GPQDIRCSGLQKMEVPYQLLSVKWMNPRTIVTLDTSEKLHVIDVRSEEELEVIDISEVQL
VYGTSYFKSLATGGNVSQALAYAGEQACYQSITSHGGQLFLQGTRNVHVFTLRTWKERLE
VLVKQNKYQEALALALSFYEGKAKAVVGLTGPQKQRKDIIAHLMLDLLFNYVDLSMTRLC
PEKGKIEELEEYYQEIVPVCVDYSLHLQRTDILFGRIYDRFGEDVIAQGTFLECLEPYIL
GDKLTSIPPSVMKDFVGHYETREMLDNVEACIVHLDITSLDIHQVVHLCWDHGLYDAIIY
VYNKGMYDYTTPLEELLLLLTSAVKTGKQLTDSQIKLGNKLLVYISCCLAGRAYPFGDIP
DEHVEEVKEKVFATITCLHTTKPTEDEPAYPNLRSLLQFDTREFLNVLALAFEEDEFNSE
KGIAKRQRVVDILLQIMVESVGFTPTQVGVLFTFLARQMARHENTIIVNRVLFEQVLEFL
SNPEDESRHEERQQALMELIHAGGLQQFDEGRLLRLAENAKFYRVSEYLYEKRCEYDKIL
GCYLRDPSRRYHSFSYIESIIQSERYTTVQKGSVRTEALKHLQELVSIDCKQAAQTVITC
LADNLSDVVRKLQTKPAVLFEFLQGVISYRDSQSSAVHTDRQITIEPNIIELYINLMCEH
RPHDVCNFIKMNEGYRLEQTLEICRKHKASEATAYLLEKAGDIQGAFGIVLENMQSKIKC
LMEVLESREKSQRDPLVLFQEVEAILLVIIQLCQRNSGKMDEAGREALWFPLLENIMSPQ
KRMKDTANKQIIEDFKQMTHHVLNSMMGYISPPAILKKIMQDPTYNTGKFGEVKELIIGM
LENYNYEQTLMKTCKNLLYHDLHVHLRSLTCAATRGFVPRGDSCHLCNRNFVNPSDTDPV
TVFRCGHSYHIACLRVLGSIHVIDGEETWVCYLCSNAKRTGRLHSSRFHRSLSNPSQAAL
HKQEKSKSKESALDPQHAQAFESVRRAMKTPSRLAILTELASGEPSGRRTGYNRTASSIF
QNETFKLKLAPPIAMELA
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaattaagatcagcaactgatgttagctcaaatcttatcaattttgacatt
gatgaactggatgatgctgagttggatctccccgctgtagaaaacacaccaacattggaa
agcattctcaatgagccagatgaaacatcctccgtcttggatgaagatgagatccctccc
agtgccatccagctgttcaaggctgactcgggggagacttcctctatcagttcacaggac
agttacctcaatgacagacctcgtcagcggcgggacagaggtaaaaagatctccaagccc
attcatggctctgttctcaagccaagcaaattgaagaatatatcagcacaaatcctgtcc
gctgcggatcgtgtggatgcagggatgccaacagctataactgtctcctctctgattgct
attggcacgtcccatggcctggtcctggtgtttgatccgaagcaggtcctcaagtggtgt
ttaggaagcacagccgtcggggctcagtatggtgctgtgtcctccctcagcttcaacaag
gactgtacgaggctgctgtctggctttgcaaagggacagattaccatgtgggacctgacg
acaggcaaactgctgcgtacaatcacagacgctcatccgcagggcacagctgtacttcac
gtagagttcaccgacagctttgtattggctgtatgtagtgacagtggaggctctgtcttt
gagctggagtttaaacgcctgattggagtgagaacttgtgagtcccagtgcctgttttct
ggaagccgtggcgaggtgtgtgtgattgaacccctccacatgaacctgaccatcaaggac
catccaatgcaggatgtcatggtgctggcgatggcgtctctctccaaggttttactggtg
acgttacgaccaacacttaaagttatgtttactcatcctttgaagggagacccaagtact
ctgccgctgttggcttggcagtttgtgatcatccaggtgtcggagagagaccgagtcatc
gacccagtgctagtgtttgctcgtgaccagacaatttacttctatcaggtaatctgtcat
ggacctcaagacatccgctgttcaggtctgcagaagatggaggtcccataccagctgctc
agtgtcaaatggatgaacccacgaactattgtgactctggacacatctgagaagcttcat
gtcatcgatgtcagatctgaggaggagctggaggtgattgacatctctgaggttcagcta
gtgtacggcacaagttacttcaagtctctggccacaggagggaatgtcagtcaagccctt
gcttatgcaggagagcaggcctgctaccagtccatcaccagtcatgggggacaactcttc
ttgcaggggactcgcaacgtgcatgtcttcacactgaggacttggaaagagaggctggag
gtccttgtgaagcagaacaaataccaggaggctctggctctggctctctccttctacgag
gggaaggcaaaggcagttgtgggactcaccggacctcagaagcagaggaaggatatcata
gcccatctaatgcttgacctgctgttcaactacgtggacctgtccatgacccgcctgtgc
cctgagaaaggcaagatagaggagctggaagagtattaccaggaaatagttccagtatgt
gtggattactccctgcatctccagagaacagatattttatttggccgcatatatgaccgg
tttggtgaagatgtgatagctcaaggcacatttctagaatgcctggagccatatattcta
ggcgacaagctcacgtccattccaccatccgtcatgaaggactttgtcggtcactatgaa
acccgagagatgctggacaatgtggaggcctgtatcgtccatctggacatcacaagtctc
gacattcatcaggtggtacacctatgctgggaccatggcctgtatgatgccatcatctat
gtgtacaacaagggcatgtatgactacacaacacccctggaggagctgttgctgttactg
acgtcggctgtgaagactggaaaacagctcacagatagccagattaaacttgggaacaaa
ctgctggtctacatcagctgctgcctggcaggaagagcctacccgttcggagacatccca
gacgaacatgtggaggaggtcaaggaaaaggtgttcgcaacaatcacatgtctgcatacc
accaaacctacagaagatgagccagcctaccctaacctccgctcactgctgcagtttgac
acgagggagttcctcaatgtattggcgctggctttcgaggaagacgaattcaactcggag
aaagggattgccaagcgacagagggtggtggacattctgctgcagatcatggtggagagt
gtgggattcacgccaacacaagtaggagtcctatttacattcctagctcggcagatggct
cgacatgagaacaccatcatcgtcaacagagtgctgtttgaacaggtgttggagttcctg
tccaatcctgaggatgagtctcgccatgaggaacgacagcaagcactcatggagctgatc
cacgcaggggggctgcagcagtttgacgaggggagactgctccgtcttgcagaaaatgct
aaattttaccgtgtgagtgaatacctgtacgagaagaggtgcgaatatgacaagatcctc
ggctgttatctacgcgatccctccagacgataccattccttcagttacatcgagagcatc
atccagagtgagcggtacactactgtacagaagggctcagtcaggacagaagctctcaaa
catctacaggagctggtgtctatagactgcaagcaggctgcccagacagttattacatgt
ttggctgataacctcagcgatgtcgttaggaaactgcagaccaagccagcagtcctgttt
gagttcttgcaaggagtcatatcttacagagactctcagagcagtgctgtccacacagat
cgccagatcaccattgagcccaatatcatcgagctgtacatcaatcttatgtgtgagcac
cgcccccatgatgtgtgcaacttcatcaagatgaatgaaggctacagacttgagcagaca
ctggagatatgcaggaagcacaaggcgtcggaggccacggcctacctcctggagaaggcg
ggagacattcagggagcgtttggcattgtcttggagaacatgcagagcaagataaaatgc
ctgatggaggtgcttgagtcaagggagaaatctcagagagatccgcttgttctgttccaa
gaggtggaggccattctgttggtcatcattcagctctgtcagcggaactcaggcaagatg
gacgaagctggacgtgaggctctgtggtttcccctgctggagaacatcatgtcgccccag
aagaggatgaaagatactgcaaataaacaaatcatagaagatttcaagcagatgacccac
catgtattgaacagcatgatgggatacatctctccaccagccatactgaagaagatcatg
caggacccgacgtacaacactggcaagttcggggaggtgaaggagctcatcatcgggatg
ctggagaactacaactatgaacagaccctgatgaagacatgcaagaacctactgtatcat
gatctacatgttcatctgcggagtctgacctgtgcggcaactcgtggcttcgttccacgt
ggagacagctgccacctgtgcaaccgcaactttgtaaacccctccgacacagacccagtg
acagtgttcagatgtgggcacagttaccacatagcttgtctcagggtgctggggtctatc
catgtgattgatggggaggagacatgggtgtgctacttgtgcagtaatgccaagagaacg
ggtcgactacacagctctcgcttccaccgatctctctccaaccccagtcaggctgctcta
cacaagcaagagaagtccaagtcaaaagagtcagcgcttgatccccaacatgcccaagcc
tttgagagtgtccgccgagcaatgaagactccctccaggcttgctatcctgacagagctc
gccagtggagagccctcagggcggaggactggctacaacagaactgcctccagcatcttc
cagaatgaaaccttcaagctgaagctggctccacctatagctatggagctagcataa
DBGET
integrated database retrieval system
