Haliotis cracherodii (black abalone): 139465917
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Entry
139465917 CDS
T10814
Name
(RefSeq) collagen alpha-1(X) chain-like isoform X1
KO
K13884
macrophage receptor with collagenous structure
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139465917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcra04131
]
139465917
Membrane trafficking [BR:
hcra04131
]
Endocytosis
Phagocytosis
Scavenger receptors
139465917
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
139465917
NCBI-ProteinID:
XP_071104022
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MSHTKTETIVKEKILKEPPNIIVHIRLLYILTLILTTLFGISIWFGYTELKRLEEELRSK
VYQRHFESWRKLNSILRQDDVLNLLGPLAESSRDVSLKSSISSKDRREKRSSSDGSYQYD
TFEWWKRKPHNSETFIHTYCRQAQLYCAAEGKPGPPGRPGRRGSKGEFGSAGLPGQKGEP
GVAALSLYSGLPVENLRTLGNLRGPPGPKGDKGELGPFGPKGPPGNTGVPGPPGPPGLDG
MPGIDGLPGVPGVKGMKGNKGGRGLLGFPGKKGPMGLDGPKGPPGPMGPPGKDGLDGYHG
QSGLPGRNGTDGKPGRKGRKGDDGLNGTPGTRGMSGVPGVPGLKGTKGDQGQMGWQGPPG
VCTCLPEENSDRLQRLGYPSYRENVLSGPRGPPGQKGSKGDSGSCEAHCNENARRPRTTA
IFIKGARTSSVASSTGHEPRLDMIIMTLTCVFVLTTISTLVAVPFSIQHDLG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacacgaagacggagacaatcgtcaaagagaagattctgaaggaaccgccgaac
attattgttcatattcgtttgttatatatacttactctcatattaacaactctgtttgga
atttcaatctggtttggttacacagaacttaaacggcttgaggaggagttgagaagtaaa
gtgtaccagaggcattttgaatcatggagaaagctcaatagtattttgcgccaggacgat
gtattaaacttgttaggaccattagcagaatcaagccgtgatgtgtcccttaaatcaagt
attagctcgaaggatagacgagaaaagcgctcatcatctgacggaagctaccagtatgat
acatttgaatggtggaagagaaagccccacaattcggaaaccttcatacacacatactgc
agacaggcacaactatattgtgcagctgaagggaagccaggtccccctggaagaccaggc
aggaggggttcaaaaggagagtttggctctgcaggtttaccaggccagaagggcgaacca
ggagtggctgcactgtccttatattccggtcttccagtggaaaacctacggactcttgga
aacttgagaggcccgccagggccgaaaggtgacaaaggtgaacttggcccatttggtcct
aaggggcccccaggtaacacgggtgtgccaggacccccggggcctcctggtctggatggc
atgccagggattgatggactacctggtgttccgggagtgaagggaatgaaggggaataaa
ggaggacgaggactgctgggattccccggcaagaaaggaccaatgggtttagatgggccc
aaaggaccaccaggaccgatggggccacctggaaaggatggactggatggatatcatgga
cagtcagggttgcctggtcgaaacggaacagacggtaaaccaggcaggaagggaagaaag
ggagatgatggtttgaacggaacgcctggcactagggggatgagtggagtcccgggggta
ccaggacttaaaggaacgaaaggagaccaaggacagatgggttggcagggccctcccgga
gtgtgtacatgtttacccgaagagaactctgaccgactacaaagactgggatacccatca
tatcgagagaatgtgttatcgggcccaaggggtcctcccggacagaaaggaagcaaaggt
gattcagggagttgtgaggctcactgcaatgaaaacgctagacgacctagaacgacagct
atatttattaaaggagccagaacctcaagcgttgccagcagcacgggtcacgaaccaaga
ctggatatgatcatcatgaccttaacatgcgtgtttgttctgacaacaatatcgacacta
gtagcagtaccattcagcatccaacacgacctaggatga
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