Haliotis cracherodii (black abalone): 139465931
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Entry
139465931 CDS
T10814
Name
(RefSeq) coatomer subunit alpha-like
KO
K05236
coatomer subunit alpha
Organism
hcra Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hcra04131
]
139465931
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hcra04147
]
139465931
Membrane trafficking [BR:
hcra04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
139465931
Exosome [BR:
hcra04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
139465931
Exosomal proteins of bladder cancer cells
139465931
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
TPR_COPA_B
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_Aladin
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
139465931
NCBI-ProteinID:
XP_071104035
LinkDB
All DBs
Position
Unknown
AA seq
1225 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGICFH
NQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHLDYIRTTVFHHEYPWILSSSDDQTIRIW
NWQSRNCVSVLTGHSHYVMCAQFHCSEDMVVSASLDQTVRVWDISGLRKKNVSPGPGGIE
ERIRNPGQTDLFGTSDAIVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQIKLWRMNDSK
AWEVDTCRGHYNNVSCVLFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRREHDRFWVMS
AHPTLNLFAAGHDSGMIIYKLERERPAYAVHQNILYYVKERYLRKLDFTTSKDVPVMQLR
GGSRTPVYSMSYNPAENGVLLCTRTSNVENSTYDLYAIPKDSDSQNPDSPEGKRSSGLTA
VWVARNRFAVLDRTHSIIIKNLKNEITKKVQAPNCEDIFYAGTGCLLLKDNDSVTLFDVQ
QKRTLATQKISKVKYVVWANDMSTVALFSKHVISICNRKLENLCTIHENIRVKSGAWDES
GVFVYTTSNHIKYALTNGDHGIIRTLDLPIYITRIKGNNVYCLDRESRPRVLQVDPTEFK
FKLALVNRKYEEVLHMVRNAKLVGQSIISYLQKKGYPEVALHFVKDEKTRFGLALECGNI
EIALEAARALDDPICWEKLGEAALLQGNHQVVEMAYQRTKNFDKLSFLYLITGNLDKLRK
MMKIAEIRKDTSGHFQTALLLGDVNERVRILKGVGQKSLAYLTAETHGMSEEAELIKESF
GENDRVPDLYPSARLLQPPPPIMQQESNWPLLTVSKGFFEGAMASRGKPSGLAAAAADIE
DGAGEGWGEDAELVLDEEGGFGAGGGFDDEDLVGGEGEGGGWDVGDDDLDLPPDLDVGPT
PSGEEGYFVPPTKGTSQTQVWCNNSQLPVDHLLAGSFETAMRLLHDQVGVVNFDRYKQLF
LQTYARSRTAYLGLPSIPPLFSYPHRNWKESGARNGVPAVGLRLNMLVQQLQAAYQLTTT
GKFADACEKFRSILLSVPLLVVDNKQEIAEAQQLIEICREYIVGLSLEAKRKEMPKSNLE
EQKRICEMAAYFTHCSLQPVHLILTLRTALNLFFKLKNYKTAASFARRLLELGPKPDVAT
QTRKILAACEKNPVDEHELKYDQHNPFDICGATFVPIYRGKPVVKCPLSGACYMPEFKGQ
VCSVTQVTEIGKDCIGLRISPIQFR
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaaaatttgaaactaagtcggcaagagtgaaaggtctctcctttcacccgaag
aggccatggattttggcaagtctgcacaatggagtcatccaactttgggattatcgaatg
tgtactttgattgacaagtttgatgaacacgatggtccagtgcgtggtatctgtttccac
aaccaacagccgctgttcgtgtctggtggtgatgactataagatcaaggtttggaactac
aaacaaaggcgctgtttgttcacgctgctggggcatctggactacatcaggacaaccgtg
tttcaccatgagtacccatggatccttagttcgtcagatgatcagacgattcgcatttgg
aactggcagtctaggaattgtgtttcagtattgacaggtcacagtcactatgtgatgtgt
gcacagttccactgctcagaggacatggtggtgtcggcatccctggaccagactgtcagg
gtctgggatatctccggacttcgtaagaagaatgtatctccaggacctggtggaatagaa
gagcgaattcgcaacccaggtcagaccgacttgttcggaacatctgatgccatcgtgaaa
catgtcctggagggccatgaccgtggggtcaactgggcggccttccatccgaccctgccc
ctcattgtgtcgggggccgatgacaggcagatcaagctctggagaatgaatgattccaag
gcgtgggaagtggacacttgccgtggtcactacaacaacgtgtcctgcgtgttgttccac
ccccgacaggagctgattctcagcaactccgaggacaagagtattcgagtgtgggacatg
agcaagagaactggtgtccagactttccgccgggagcatgaccggttctgggtgatgtcg
gcacatcccactctcaacctgttcgctgcaggacatgacagcgggatgatcatctacaag
ctggagagagaacgcccggcctacgctgttcatcagaacatcctgtactatgtaaaggag
cgatacctccgcaaactggacttcaccacatccaaggacgtccctgtgatgcagctgaga
ggtggttcccgaactccagtgtacagcatgtcgtacaaccccgcagaaaatggtgttctg
ctctgcacaagaaccagtaacgttgagaactcgacatacgacttgtacgccattcccaag
gattcggactctcagaacccagattccccagaagggaagcggtcatctggtctgacagct
gtgtgggtggcacggaacagattcgctgttctcgacagaacacattcgatcatcatcaag
aatctgaagaacgagatcaccaagaaggttcaggcccccaactgtgaggacatcttctac
gctggcacaggctgtctgctactcaaggacaatgactctgtcacactctttgacgtgcag
cagaagagaaccctggccacacagaagatctccaaggtgaagtacgtcgtgtgggctaat
gacatgtccacagtggccctgttcagcaagcacgtgatctccatctgcaaccggaagctg
gagaatctgtgcacgatacacgagaatatccgtgtcaagagtggagcctgggatgagagc
ggtgtcttcgtctacaccaccagcaaccacatcaaatacgcactcaccaatggagaccac
ggcatcattcgcaccctggacctgccgatatacatcacccgcatcaagggcaacaacgtc
tactgtctggaccgagagtctcgtccacgagtgctgcaggtcgaccccacagagttcaag
ttcaaactggctctcgtcaacaggaaatacgaagaggtgttgcacatggtgcgcaatgcc
aaactggtgggtcagtctatcatctcctacctccagaagaagggctaccccgaggtcgct
ctgcactttgttaaggatgagaagactcgatttggcctggccctggagtgtggcaacatt
gaaatcgccctggaggctgcccgtgcacttgacgaccccatctgctgggagaaactgggc
gaggccgccctgttgcagggcaatcatcaggtggtggagatggcataccagcgaaccaag
aacttcgacaagctctccttcctttacctcatcactggcaacctggacaagctgcgcaag
atgatgaagattgctgagattcgcaaggacacaagtggacacttccagacagctctgttg
ctaggagacgtgaacgagagagtccggatcctcaagggagtgggacagaagtcgctggcc
tacctgactgccgagacccacggcatgtccgaggaggcggagctcatcaaggagagtttt
ggcgagaacgatcgtgtccctgacctgtaccccagcgccaggctcctccagcccccacct
cccatcatgcaacaggagagcaactggccactactgactgtgtccaaaggattctttgag
ggagcaatggcatcccgaggcaaaccatcaggtctggctgcagcagcagctgacatcgag
gacggagctggagaaggatggggagaagatgcagagctggtgttggatgaagagggagga
ttcggagctggcggagggtttgatgatgaggatcttgttggtggtgaaggggaaggtggt
ggctgggatgttggtgacgacgacctggatctgccacccgatctggatgtcggccccacc
ccatcaggagaggaaggctacttcgtccccccgaccaagggtaccagtcagacacaggtg
tggtgcaacaattcccagctgccagtggaccatctgctggccgggtccttcgagacagcc
atgaggctgctccatgaccaggtgggcgtggtcaacttcgaccgctacaagcagctgttc
ctgcagacgtacgcccgttcacgaacagcataccttgggctgccatctattccacctctc
ttcagctacccacaccgaaactggaaggagtctggagctcggaacggtgtccccgccgtg
gggctgaggctgaacatgctggtgcagcagctccaggccgcctaccagctcacgaccacc
gggaagtttgccgacgcttgtgagaagttccgctcgatcctcctcagtgtgccactgctg
gttgtggacaacaaacaggagattgctgaggcccagcagcttatcgagatctgccgtgag
tacatcgtaggcctgtccctcgaggcgaagaggaaggagatgccgaagtccaaccttgag
gaacagaagcggatctgtgagatggcagcctacttcacccactgcagcctccagccggtc
cacctcatcctcacactcaggacggcgctcaatctcttcttcaaactcaagaactacaaa
acagctgcatcatttgctcggcgtctcctggaactcggacccaaacccgatgttgcaacc
cagacccggaagatcctggctgcatgtgagaagaaccctgtagatgagcacgagttgaag
tacgaccagcacaaccccttcgacatctgtggggccaccttcgtccctatctacagaggc
aagcctgtcgtcaagtgtcctctcagtggagcctgctacatgccggagttcaagggtcaa
gtctgcagtgtcacacaggtgactgagatcggcaaagactgtataggactgagaataagc
cccattcagttccgttag
DBGET
integrated database retrieval system
