Haliotis cracherodii (black abalone): 139466731
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Entry
139466731 CDS
T10814
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra04148
Efferocytosis
Brite
Membrane trafficking [BR:
hcra04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
139466731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
DUF6261
Motif
Other DBs
NCBI-GeneID:
139466731
NCBI-ProteinID:
XP_071104489
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MSVKAFELVPAIERVKLMSDKAKSQIECIDVCGKNLYIGTNDCFVVHYTIEEKTCSSGRV
SFQSEKQGHKYLAVKKAITQLQGASALNRILVVCDNTLTLLNMFDLEPILSGAKIKGITC
FCVNHNPLRTNPFSIEICVALKKKQLQLYTVTEDRMIHLRDITLSEPAVAVGVDGVNICA
ALTSQYMVINSDTNSMQDLFPYDNDQMTPIVKRISKDEFLLSGPSALGMFVTSAGISQRP
PMQWSDNLVSVSYVHPYILAMNDEFITVHSILDQQQKQAIPFQGGVCLGDYDGRLFVASG
REIYSLVPVAFEKQIQALLADKRVKEALDLAKNATKTGLSREKFLKMYHRIQQQAGFIEF
SQQHWQEATELFQEGEVDIKEIISLYPHLMPASVNFVRSAPPLHEIADVNQLTKGDDSLI
PEYKHFLRCYLEEIKGTKQAIGINPLIDTVLLRLYAEVNSPELIPLIAVDSSCDLNDCVE
SLERFHRYHALGLLYKFHGEYDKAINIWTKLVDDTLRDESFSGIDFVVEFLANLSDHEIV
WKYVDWALEKDQDQGVRIFTEQPAGELQTERLRPDTVIDYLHRFPSAVITYLEYLVFQKK
LEKEKYHTHLAVLYLDAVLSLMKTNNVKKEEVDIARSKLRQMLQISNLYRVQLILGKAKE
TDMHAECAILYGKLEEHDKALRILVHKLKDFGAAENYCLVNSDGKEPSYRKRLFHILLSV
YLDPSYERKDTLVAPAMALLNSNVADFDTNKVLHLLPDHWSVGLLSQFLTRTVRKSMHCS
RTTHIERMMARGENLAVKQICIELQRDPVIMNDDRMCAVCNRAFSEPMFVRYPNGVVTHV
HCAKNKYVCPVTGKLFSSLVPKKVDIEARNNWK
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcaaagcatttgagttggtacccgccatcgagcgggtaaaattaatgtctgac
aaagcgaagtctcagattgagtgcattgatgtctgtggcaagaacttgtacattgggaca
aatgactgttttgttgttcactacactattgaagagaagacatgctcgtcaggcagggtt
tcatttcagagtgagaaacaaggtcacaagtacttagcagtgaaaaaggccatcactcag
ctgcaaggtgcgtcagcactcaacaggatcctggttgtgtgcgacaacacgctcactctg
ctcaacatgtttgacctggagccaatcttgagtggagcaaagatcaagggaataacctgc
ttctgtgtcaaccacaacccattgcgaacaaaccctttcagtattgagatctgtgtggca
ctcaagaagaagcagctgcagctgtacacggtaacagaggaccggatgatccacctccgg
gacatcaccctgtctgagccagctgtggccgtgggtgtcgatggtgtcaacatctgcgct
gcactgacgtcccagtacatggtcatcaactccgacaccaactccatgcaagacctgttc
ccctacgacaacgaccagatgacgccaatagtcaagagaatcagcaaggatgagttcctg
ctgtctggcccgagtgccctgggcatgtttgtgacatctgcgggcatctcccagcgtcca
cccatgcagtggtcagataacctggtcagcgtcagctacgtccacccctacatcctggca
atgaatgacgagttcatcacagtacacagcatcctggaccagcaacagaagcaagccatc
cccttccagggcggggtgtgtctcggggactatgacggccggctgtttgtggcctcaggg
agagagatctactctcttgtacctgtggcctttgagaaacagatccaagcactgttggct
gacaagagggtgaaggaggccctagacttggccaagaacgccacgaagacaggtctcagt
agagagaagttcctcaagatgtaccaccgcatccagcagcaagccggcttcatcgagttc
tcccagcaacactggcaggaggcgacggaactgttccaagagggggaggtggacatcaaa
gagatcatcagtttatatcctcacctgatgcctgccagtgtcaactttgtcaggtcggcc
ccccctctccatgaaatagcagatgtcaatcaactaacaaagggagatgactctttgata
cctgaatataaacatttcttgaggtgctatttagaagagataaaaggaaccaaacaagcc
attggcattaatccgctgattgatactgtgctattgagattgtatgctgaggtgaactcg
ccagagttaattcccctgattgctgtggattcaagctgtgatttaaatgactgtgtagag
agtctggagaggttccatcggtaccatgcactggggctgttgtacaagtttcatggagag
tatgataaggccatcaatatctggacaaaattggtggatgacacattgagagatgagagt
ttttctggaatagattttgtggtagaatttcttgccaacctgagtgaccatgagattgtg
tggaagtatgtggactgggccctggaaaaggatcaagatcagggagtcaggatatttacc
gagcagccagctggagagctgcagacagagagactgagaccagacacagtgatagactac
ctgcatcgcttcccctccgcggtcatcacgtacttagaatacctcgtctttcagaagaag
ctggagaaggagaagtaccacacccacctggcagtgttgtacctggatgctgtgctcagc
ctcatgaagacaaataatgtcaagaaggaggaggtagatatagcgaggtccaagttacgc
cagatgctgcagatctccaacctctaccgagtgcagctgatcctgggcaaggcgaaggag
acggacatgcatgctgaatgtgcaatactgtatgggaagctggaagaacatgacaaggcg
ctgaggatcctcgttcacaagttgaaggactttggagccgccgagaactactgccttgta
aacagtgatggcaaggagccgtcataccgcaagcgtctcttccatatactgctcagtgtc
tacctagacccaagctatgagcgtaaggacactctggtggcacctgccatggctctgttg
aacagtaatgttgcagattttgatacaaacaaggttttacacttgctgcctgaccactgg
tcagtaggtcttctgtcccagtttctgacacggacggtgcggaagagtatgcactgtagt
cggacgacccacatcgagcggatgatggcaagaggggagaacctggcagttaaacaaatc
tgtatagagttacagagagatcctgttataatgaatgatgatagaatgtgtgctgtatgt
aaccgtgcgttcagcgagccaatgtttgttagataccccaatggagttgtgactcacgtg
cactgtgccaagaacaaatatgtgtgccccgtgacggggaaactcttcagctccctcgtt
ccaaagaaggtggacatagaagctcggaacaactggaaatga
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