Haliotis cracherodii (black abalone): 139466735
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Entry
139466735 CDS
T10814
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03015
mRNA surveillance pathway
hcra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139466735
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139466735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139466735
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
139466735
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
139466735
NCBI-ProteinID:
XP_071104494
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MADSVDIDLYANIEDDFNQDTDFANHGDDLYDDVITAGSSSEGMDRNTDSKQHTPMLSST
QYTGKKFMCYVGNLTWWTTDQDLTDALTSIGVHDLVEIKFYENRANGQSKGFALVVVGSE
SSSRHIFEKLPKKEMHGQVPQVTPYSRQALSQFEAAARKGGEGPPQNGNRNQRSNPRNQP
PPSQQGKPGNFPPRGMQRPPPQVSQGPPPPGPPHGGPPPMYGGPPRLGPPPQLPPPGGLP
PPGGPPLRPPQGPPPPGMVEPPRMGPGPPPHLRGPPGPGPDPRGPPPPIRPEWDRPPETM
VVTSQPPPPGAPFPNAGPPPPQPVPPPGLRPMGPGFPGGPPSQMPPVPGPPPGHMQAPAP
HVNPAFFPPPHSQAPPPGPAPGDPYGRGPPPQSYPNDPFLGRPPPESRHEPPPPALSEQE
FEEIFQRNKTVSSSAINRAVQDASAGDFASAIETLVTAISLIKQSKIAADDRCKILISSL
QDTLHGIEEKSYGSKSSSSSRRSRSRERDRDRDREKRSRHRSRSRDREYRERSRDRDRYH
EERHRERDRERERDRGERDYSRRH
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagtgtggacatagatttgtatgcaaatattgaagacgactttaatcaggat
acagattttgccaaccatggagatgacttatatgatgatgttatcacagccggctccagt
agtgagggcatggataggaatacagattccaagcagcacacccccatgctttccagcaca
caatatactgggaagaagttcatgtgctatgtaggaaacttaacatggtggacgacagat
caagatttgacagatgcattgacttccataggagtccatgacctcgtggaaatcaagttt
tatgaaaacagagcaaatggacagtctaaaggtttcgccctagttgtggtgggctccgag
tcctcctccaggcatatatttgagaagctgcccaagaaggagatgcatggtcaggtgccc
caggtgactccctacagtagacaggcactaagccagtttgaggccgcagccaggaagggc
ggggaaggacctccacagaatggtaacagaaatcagagaagcaatccacgcaaccagcct
cctcccagtcagcaagggaaaccaggaaactttcctcctcgtggcatgcagcgtcctcca
ccccaagtctcacagggaccacccccacctggcccccctcacggtggccctccgcccatg
tatggaggaccaccccgacttggtcctccgccacaacttcctcctcctggagggctccct
ccccctggcggaccacccctcagacctccacagggacctcctcccccaggaatggtagag
cctccaagaatgggcccaggaccccctccgcatctccgtggtcccccaggtcctggtcct
gaccccaggggtcctcccccacctattaggccagagtgggatagacctccagaaaccatg
gttgttaccagtcaacctccaccccctggggctccgttccccaacgctgggcctccgccc
ccgcagccggtaccccctccaggtctaagacctatgggaccaggattccctggtggcccc
ccatcacagatgccacctgtgcctggccctcccccaggacatatgcaagcgccagcccca
catgtcaatccagccttctttccacccccacacagtcaggccccgccgccagggccagct
cctggcgatccatatggacggggtccgccaccccagtcatatcctaatgatccattcttg
ggccgacctccccctgaaagtcggcatgagcctccccctccagccttgagtgagcaggaa
tttgaggagatcttccagagaaacaagactgtgtccagcagtgctatcaacagagctgtg
caggatgcaagtgcaggtgactttgctagtgctattgagacattggtgacagcaatttct
ctgatcaagcagtctaagattgctgctgatgaccggtgcaagatcctcatcagctccctc
caggacaccctccatggcatagaggagaaatcctatggctctaagagcagcagcagcagt
cgccgatctaggtcaagggaacgtgatcgtgaccgagaccgtgaaaagaggagtcgtcac
agatcccgcagtcgtgaccgagaataccgtgagaggagtagggatagagatcgctaccac
gaggagagacaccgggagagggatcgggaaagggaaagagacaggggagagcgtgattac
agcaggaggcactaa
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