Haliotis cracherodii (black abalone): 139466759
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Entry
139466759 CDS
T10814
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
139466759
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcra03021
]
139466759
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139466759
Transcription machinery [BR:
hcra03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
139466759
RNA polymerase I system
139466759
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
139466759
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
KOW5_SPT5
KOW6_SPT5
KOW2_Spt5
KOW
Spt5-NGN
KOW7_SPT5
KOWx_SPT5
Spt5_N
GPKOW_C
DUF3912
PPV_E1_N
Motif
Other DBs
NCBI-GeneID:
139466759
NCBI-ProteinID:
XP_071104525
LinkDB
All DBs
Position
Unknown
AA seq
1071 aa
AA seq
DB search
MSDSEDSDISDAESEGGQLDQSRGSDAGSDAGSGSPAGSPRGGSEGGGSDGGGSGSDEGS
DKDEGEEEEDDVEYDEDEDERQRRKKRARVSKFIIEEADVDDEGDEEDDVEWEEGAEDII
DKKTMLDGNSAREMENHQRLRHLWDSQREDEIEEYYRQKYGETPAAERYGEGEEMSDEIT
QQGLLPGVKDPNLWVVKCRMGEEKSTVIHLMRKFIAYQFTDEPLQIKSVIAKEGLKGYIY
IEAYKQTHVKQAIEGVGNLRIGLWQQQMVPIKEMTDVMKVVKETTNLKSKSWVRLKRGVF
KDDLAQVDYVEPSQNVVHLKLIPRIDFSKPRGVFRTSASQEAERNKKRKRRPAQKLFDID
GVRAIGGDVSTDGDFLIFEGNRYNRKGFLFKSFVMSAIIPDGVKPTLSELERFDNTPEGL
DVDLVPQKKSSTSEVTHNLAPGDVVEVCEGELVHLQGRVIRVEGNKITIMPKHEDLKDPL
EFPAHELQKYFKMGDHVKVIGGRYEGDTGLIVRVEDNMVVLFSDLTMHELKVLPKDLQLC
TDMATGVDSLGQYQFGDLVMIDAQTVGAIVRLEKENFQVLSMHNKVQNLKPQSLTRKKDT
RNAVALDSENNNIQVKDIVKVIDGPQSGRSGEIKHLYRSYAFLMSRMVTENGGYFVCRTR
HLVLAGGSRQSNTSFSAGGFVPMSPRLASPAHPSGGGGGGGQGGAGRGRGGISKRDRELI
GQTVRVRQGPFKGYIGIVKDATESTARVELHASCKTISVDRSRLATLTGQKVGGFTSSYQ
KTPMYGGQTPMYGGSRTPMYGSQTPVQDGSRTPHYGSQTPSHEPGSRTPGSSAWDPSSAN
TPSRPNEFDFNFDESPSPADYATTPNPGTPGYQADTPSPMGPYTPQTPGSAYSPYHQASP
SPASYQAPSPGYVGTPSPAGYQGSPSPGGYAGTPSPMGYSPMTPGAPFTPQTPGTAMDHS
MADWHTQDIMVKIKETHDDPNLIFQTGEIRSVTGGMCSVYITDEDKVVNVSCEHLEPVQP
EKQDKAKVILGDERELTGTLLSIDGIEGVIKTDGGEIKMLPIKYLCKMPAS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagtgaggacagcgatatctccgatgctgaaagtgagggtggtcagctggac
cagagtcgaggaagtgatgcgggcagcgatgcggggagtgggagccctgcagggagtcct
aggggaggcagtgagggaggggggagtgatggcgggggaagtggcagtgatgaagggagc
gacaaggacgagggggaggaagaagaagatgatgtagagtatgacgaagatgaagatgaa
cgtcagagaagaaagaaacgtgccagagtcagcaaattcatcattgaggaggctgatgtt
gatgatgagggtgatgaagaggatgacgttgagtgggaggagggcgcagaggacatcatc
gacaagaagaccatgctggatgggaacagtgcacgcgagatggagaaccatcagaggctg
cggcacctttgggacagccagcgtgaagatgagatcgaggagtactacagacagaagtat
ggggagacacctgccgcggagaggtacggcgagggagaggagatgtcggacgagatcaca
caacaggggctgctgcctggtgttaaggaccccaacttgtgggtggtcaagtgtaggatg
ggtgaggagaagtccaccgtcatccatctcatgaggaagtttattgcctatcagttcaca
gatgagccacttcaaatcaagtctgtgattgccaaggagggcttgaagggctacatctac
atcgaggcttacaagcagacccacgtcaagcaggccatcgagggagttggcaacctcagg
atcggtctatggcaacagcagatggttcccatcaaagagatgacggacgtcatgaaagtg
gtgaaagagaccaccaacctcaagtccaagtcctgggtcagactcaagagaggagtcttt
aaggacgatcttgctcaggtggactatgtggagccatcccagaacgtggtgcacctgaag
ctgatcccacgtatcgacttctccaaaccccgcggtgtgttccgtacctcagccagtcag
gaggctgagagaaacaagaaacggaagcgtcgccccgcacagaagctgttcgatattgat
ggcgtcagggctattggtggcgatgtgtcaactgatggagacttcctcatattcgagggg
aacagatacaatcggaaaggtttcctcttcaagagcttcgtcatgtcggccattattcct
gatggagtgaagcctacactatcggagctggagcggtttgacaacacaccggaaggtctt
gatgttgatttggtaccccagaagaagtcgtcgacgtcggaggtcacccacaacctggcc
cccggggacgtggtggaggtgtgcgagggggagctggtgcatctgcagggacgtgtcatc
cgcgtggagggcaacaagatcaccatcatgcccaaacacgaggacctgaaggatccactt
gagttcccagcccacgagctgcagaagtacttcaagatgggggaccacgtgaaggtgatc
ggaggacggtacgaaggggacacaggactcatcgtgagggtggaggacaacatggtggtc
ctcttctctgatctcaccatgcacgagctgaaagtgttgccgaaagatctacagctctgt
accgatatggccaccggagttgactcgctgggacagtaccagtttggggacctggtcatg
atagatgcccagacagtgggagccattgtgaggttggagaaggagaacttccaggtgctc
agcatgcataacaaggtacagaacttaaagccccagtccttgacaaggaagaaggacaca
cggaatgcagtcgccctggactccgagaacaataacattcaggtcaaggacattgtcaag
gtcatcgatggaccgcagtcaggccgatctggggagatcaaacatctgtaccgcagctac
gcattcctcatgtcgagaatggtgacagaaaatgggggttacttcgtgtgccggactcgc
catcttgtgctggcaggaggatcacggcaaagcaacaccagctttagtgctggaggattt
gtgccaatgtctccccgtttagccagccccgcccaccccagtggtgggggcgggggcggg
ggccaagggggcgcgggtagagggcgtggaggcatcagtaagagagaccgagagcttatc
ggacagactgtccgagtcagacagggccccttcaagggatatattggcatcgtgaaggat
gcgactgaatctacagcaagagtggaactacatgccagctgcaagaccatctctgtagac
aggagtcgactcgccacactcaccgggcagaaggttggtggtttcacctccagctaccag
aagacaccaatgtatggtggccagacgcctatgtatggtggctccagaactcccatgtac
ggttcacagacaccagtgcaggatgggagcagaacacctcactacggaagtcagacacca
tcccacgagccaggcagccgcaccccgggatcatccgcttgggatccctccagtgctaac
acgccatccagaccaaatgaattcgacttcaactttgatgagtcaccctctccagccgac
tatgccacgaccccaaacccaggcacccccgggtaccaggcggacacacccagccccatg
gggccctacaccccccagactccaggcagtgcttactccccctaccaccaggcctccccc
tctccagccagctaccaggctcctagtcctggctatgtaggcacccccagccctgccggg
taccagggcagcccgtcccccgggggttacgcaggcacgccctcgcccatgggttacagc
cccatgaccccaggggctccgttcactccacagacacctggcacagccatggaccacagt
atggcggactggcacacgcaggacatcatggtgaagatcaaggagacccacgatgatccc
aacctcatcttccagaccggggagatccggagcgtcactggagggatgtgttctgtgtac
atcacggatgaagacaaggtcgtcaacgtgtcctgtgagcacctggaacctgtgcagcca
gaaaaacaggacaaggccaaggtcatccttggagatgagagagaactgactggcactctg
ctcagtattgacggcatcgaaggcgtgatcaaaacagatggcggcgagatcaagatgctg
ccgatcaaatacctgtgcaagatgcctgcttcatga
DBGET
integrated database retrieval system
