Haliotis cracherodii (black abalone): 139467960
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Entry
139467960 CDS
T10814
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139467960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hcra03041
]
139467960
Spliceosome [BR:
hcra03041
]
Complex B
Other components
Prp19-related factors
139467960
Complex C
139467960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
RRM_YTH1
RRM_occluded
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Nup35_RRM_2
RRM_3
zf-CCCH_10
RRM_PARP14_3
zf-CCCH_PARP12
O-antigen_lig
Motif
Other DBs
NCBI-GeneID:
139467960
NCBI-ProteinID:
XP_071105673
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MATSKGANTYNRQNWEDAEFPILCQTCLGDNPYIRMTKEKYGKECKICARPFTVFRWCPG
ARMRFKKTEVCQTCSKIKNVCQTCLLDLEYGLPVQVRDAALKAYDNMPKSDVNKEYYTQN
MEREIANSDGTNPVGALTGKAQAPSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEEC
PYRHEKPTDPDDPLADQNIKDRFYGMNDPVADKLMNRYSNMPKLEAPEDKTITTLYVGNL
GDKVTEQDLRDHFYQFGEIRSVNVVAKQQCAFVQFTERPASETAAERSFNKLIINGRRLN
IKWGRSQGQQQLTGKKEDDGQMLEPVPGLPGALPPPPEELGNNFFNLQGPPPALPPLPPR
GMMPRGPPPMPPFGIMPRGPPPMGMRMPPPPPGIMPIRPPPGVHMRHMVHYPSQDPTRMG
AVSSGKQPQQQQQPPQQQQQT
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccaagggagcgaatacgtacaatcgtcaaaattgggaagatgctgagttt
cccatcttgtgccagacatgtcttggggacaatccttatattcgaatgaccaaggaaaag
tatggcaaggaatgtaagatctgtgcccgacccttcaccgtgttccgctggtgtcccggt
gctcgcatgcgcttcaaaaagacagaagtctgtcaaacctgcagcaagataaagaatgtc
tgccagacatgtctcctggatttggaatatggtcttcctgtccaggttagagatgcagcc
ctgaaagcctatgacaacatgcccaagtcagacgtcaacaaggaatattacacacagaat
atggaacgagaaattgccaacagtgatggcaccaaccctgtgggggcacttacagggaag
gcccaggcgccgagcgacatgctgctgaagctggccaggaccacaccctactacaagagg
aacaggccacacatctgctcattctgggtcaagggggagtgcaagagaggagaggagtgt
ccataccgtcacgagaagccaactgatccagatgaccctctggctgaccagaacatcaag
gaccggttctacggcatgaatgaccctgtggcggacaagctgatgaacagatattccaac
atgccaaagctggaagccccggaggacaagaccatcacaaccttgtatgttggtaacctt
ggagacaaggtgacagagcaggatctcagagatcacttctaccaatttggtgagattagg
tctgtgaatgtggtcgcaaaacagcagtgtgcttttgtccagtttacggaaaggccagca
tcagagacagccgcagagaggtcgtttaataagctcatcattaatggtcgccggctgaac
attaagtggggtcggtcacagggccagcaacaactgaccggcaagaaggaggacgatggt
cagatgctggaaccagtgccagggcttccaggagctctaccacccccaccagaagaactg
ggaaacaacttcttcaacctccagggcccacccccagcactgccgcccctcccacccagg
gggatgatgccccgtggacctccacccatgcctccgtttggcatcatgccaagaggacca
ccacctatgggtatgcgcatgcctccccctcctcctggtataatgcccatcaggcctccc
ccaggggtacacatgagacatatggtgcactatccatcacaagaccccacaaggatgggg
gcagtgtcgtcagggaaacagccacagcagcagcagcagccgccacagcaacaacaacag
acttag
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