Haliotis cracherodii (black abalone): 139468005
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Entry
139468005 CDS
T10814
Name
(RefSeq) cholesterol transporter ABCA5-like isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
139468005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcra02000
]
139468005
Transporters [BR:
hcra02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
139468005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
RsgA_GTPase
AAA_29
SMC_N
ABC2_membrane
cobW
TsaE
AAA_22
Zeta_toxin
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
139468005
NCBI-ProteinID:
XP_071105754
LinkDB
All DBs
Position
Unknown
AA seq
1698 aa
AA seq
DB search
MSTLFGQLKALLWRNILLKKRNKKQLIQELFYPIYFVLLLSLIKTLAKPSTTPPTPEFPQ
YNLADPRFILNTKGNILVVPDTPEVKDIIANVEGYIGSLNVVYSATEAEAVALYKATSNN
VSAGIVFNDTGDNPVYSIRTTYNDDLLSTKLFTGKGECLKADRAATDSNCKANKYLTTGF
AWLQRAIEAAFIKKKSATFSLPEVFVQMMPKEEFTSDVTYIQYLASVYFVMAYSSFVNFL
TVNIVAEKEKKIREGMKMMGLRDSVLWLSWSLTYTLLIAVVTGVITIIAYGFGFYSRSSN
LFIFFLLMLLYGISIITMAFAVTPFFRKAQAAGMVTSFATIAISCLYFAVSLTRETTRDG
YHYPYAPGGVWAICLLSPVALALGIDQGIYLDTAKGGMTFANISEGEFPLSGPIIMLVVD
IILYAVIAVYFDHVIPGEFGPRYPPWYFLMPSYYCQKKRSGDSELSALTSNEHQSINGSF
TGSDPNIEPVHQDLKDKAGVRINNISKDFPSKEETVHAVRGLSLDMYEGHITALLGHNGA
GKTTLINMLCGLTPPTSGTATIYDMDVSNSGDMERLRAMCGVCPQHNILYDDLTTKEHLI
VFAGIKGVAEDGKEEAVTRAMKDADIYEKADTFAKNLSGGQKRKLSVAMALIGDPKIIFL
DEPTAGMDPFSRRHLWSLLQNSKKGRIILLTTHFMDEADILADRKAIISHGTLRCLGSSL
FLKNRFGIGYHLNMVVEPDCNAETVSSVLSEQVKGVEMKRSHAKELAFTLPLSEVSTFSN
MFSSLEQKVNGTTQAEKLGIKSYGVSMTTLEEVFLKLGEDTDENPAPGHGIENPAYDENG
LRSTQRVFSDGESQINLEMKDHSNPTQSLANKPTVENLASQRFWALMKIRFLIIIRNPMA
VIFQIVLPIVFVVVGCVLSTLGPSAADSSNPKPVSLFATSATYASAPLAAIDSQNDVDST
TFISKVNDTWQVDKNLNISLLLYPNHILGFNLQQYQTSNNDINYTALYNTTALHSLPTII
NIMSNTLYSLVTGGSNISGSSLPWPSISTQLTYSGSAFSATLVVALAFAVLSPGFAMFLV
VERQTKTRGQQRVAGITFNMYWASLFILNCTMFAIPVVICIIIVGAVPVASLSSAGAMVS
LVLLFITYIPANILVVYNLSFAFDAYETCQAVLPNLMIFGTLLPYVAVSLTDMLGSADAA
TAIHYVMTVINPLYALIGGLYYIDRIHRVSLIARTEIEFGMYFQGDSNILITILMPIVHC
GLLYVLLRVLDVRSTGGNSKEALNCQGTSKVNDIPEDNQDVIGDEDEDVAEERNRVNSLQ
TGAQDAPVAYVQNIRKEFAKDIKAFCKKTKQKTNVAVRNATFAVDCGEVFGLLGPNGAGK
TTALNMIIAETGPTRGKVIVAGHDIRSSMSSAFQAMGYCAQHDALWEKITLREHIEFYGL
LRGLSQKDSVTMADGMIASLKVEEHAKKGAKKLSGGTKRKLSYAISMLGSPEIVLLDEPS
TGMDPQSKRFLWDTISGSFEGTKRGAILTTHYMEEADALCSRVAIMVNGKIECLGPTQHL
KDKYGSGYLLEVKLKTGGHGEDIEARMDSLESHVVALFPQASCMERFEERGQYKIPRDNV
KSLSETFSSLEQTKQTHDVEEYSFSQSTLEQVFLDFAKKQHEEGEEDNVPKSLMRQLSDA
GGHRDSDSRGRGNISVRM
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgtccactctatttggacagctgaaagctttgctttggaggaatattctcctcaagaag
cggaacaagaaacagcttatacaggagctgttttacccaatctactttgtcctgctcctc
tcactcattaaaactctcgccaagccaagtacaactcccccaaccccggagttcccccaa
tacaatcttgcagacccacgcttcatcctcaacaccaagggaaacatcctggtggtgcca
gacacaccagaagtcaaggatattattgccaatgtcgaaggttacattgggagcctcaat
gtggtctacagcgccacagaagctgaagctgtagctttgtacaaagcaacttcaaacaat
gtctcagccgggattgtgttcaatgacacaggagataatcctgtctattcaatacgaaca
acgtacaatgatgacctacttagtactaagttgttcactggcaaaggtgaatgcctcaag
gccgacagggctgcaacagattctaactgcaaggccaataaatatctcacgactggattt
gcttggcttcagcgtgccattgaagctgcatttatcaagaaaaaatctgcaactttctct
ctgccggaagtgtttgtccagatgatgcccaaggaggaatttacgagtgatgtcacgtac
atccagtatctggcgtctgtctactttgttatggcttactcgtccttcgtgaacttcctc
actgtcaacatagtagccgagaaggagaagaagattcgggaagggatgaaaatgatgggc
ctgagggactccgttttgtggttatcatggagtttgacatacactttactcatcgccgtg
gtaacaggtgtcatcactatcattgcctatggcttcgggttctacagcagaagcagcaat
ttgttcatctttttcctgttgatgctgctgtatgggatctcaatcatcaccatggcgttt
gcagtcacaccgttcttccgcaaggcgcaggcagcaggcatggtcacaagtttcgcaacc
atagcaatcagttgtctgtattttgctgttagcctgacgagggagaccactcgtgatggc
tatcactacccttatgccccaggaggagtctgggccatttgtcttttgtctccagttgct
ttagccttgggcatagaccagggtatttacctggacactgctaaaggaggaatgacattc
gccaacatatccgagggggagtttccactatctggcccaatcatcatgctggtcgttgac
atcatcttgtatgcagtgatagccgtatacttcgaccatgtcattcccggtgaattcggt
cctcgataccccccctggtatttcctcatgccatcctactactgtcaaaagaagagaagt
ggggattcagagttatctgcccttaccagtaatgaacatcaaagcatcaatggctctttc
actggcagcgatcctaatattgaacccgtgcaccaagatctaaaggacaaggcaggagtc
cgaatcaacaacatatctaaagattttccatccaaagaagaaacagtccacgctgtccga
gggctctccctggacatgtatgaggggcacatcacagccttgctgggccacaacggtgca
gggaagacaactctcatcaacatgctgtgtggattaactccccctactagtggcactgct
acaatctacgacatggatgtttctaacagtggcgacatggagcgccttcgggccatgtgt
ggggtgtgtccacaacacaacatcctctacgatgacctcaccactaaggagcatctcatt
gtgtttgctggtatcaagggcgttgcggaagatggcaaggaggaagctgtgacaagggct
atgaaagatgcagacatttacgagaaggctgacacatttgccaagaacctcagtggagga
cagaaaagaaagctgtctgttgctatggcactcattggagacccaaagattatcttcctg
gatgagccaacggctgggatggaccctttctcccgacgccatctttggtcactcctgcag
aacagcaaaaaaggacgcattatcttgttgacgactcatttcatggatgaagcagacatc
ttagcagatcgcaaggccatcatcagccatggcactctcagatgcctagggtcttcactg
ttcctcaagaacagatttggaattggctaccatctgaacatggtggtcgagcctgactgt
aatgcagagacggtgagctctgtgctcagtgagcaggtcaagggtgtcgagatgaaacgc
tcccatgccaaggagttggccttcaccttgcccctctcggaagtgtccactttctcaaat
atgttttcatccctggagcagaaagttaacgggacaactcaggcagaaaagcttggtata
aagagctatggtgtttcaatgacaacattggaagaagtattcctcaaactaggtgaggac
actgatgaaaatcctgctcctggacatggaattgaaaaccctgcctatgatgaaaatggt
ctcagatccactcagcgagtgttttccgatggtgaaagtcaaattaacttagagatgaag
gatcactcgaaccctactcaaagcttggccaataaacccacagtcgaaaacctggcatct
cagcgattctgggcattaatgaagattcgtttcctaattatcattcggaatccaatggct
gttatcttccaaatcgttctccccattgtatttgtggtggtgggctgcgtcctcagcacc
ctcggtccaagcgccgcagatagctccaatccgaagccagtttccctgttcgcaacatct
gccacgtatgcttccgctcctctggcagctattgactctcaaaatgatgttgattccact
acgtttatctcaaaagtaaatgacacctggcaagttgataaaaatctcaacataagcctg
ttgttgtacccaaaccacattcttggcttcaaccttcaacaatatcagacatcgaacaat
gacatcaactacacagcgttgtacaacacaaccgcactccactccctccccaccatcatc
aacatcatgtccaacaccctgtacagtttagtaactggaggctccaacatctcggggagc
agcctcccgtggccgtccatctcgactcaacttacatacagtggatcagcgttctcggca
accctggttgtggccctggcatttgcagttctgtctcctgggtttgctatgttcctggtt
gtagagagacagaccaaaactcgaggccagcaaagagtggctggcatcaccttcaacatg
tactgggcgtccttgtttatactgaattgcaccatgtttgccatccccgtcgtcatctgc
atcatcattgtcggagccgtgccggtagcttccttgagttcggccggagctatggtgtca
ctggtgttgctgttcatcacctacatccctgccaacatccttgtcgtctacaacttgtcc
tttgccttcgatgcgtacgagacgtgtcaggcagtgctgcccaatctcatgatatttggt
acactgttgccttatgtcgctgtgtcactcacggacatgctggggtcggcggacgctgcg
acagctatccactacgtcatgacagtcatcaatccactgtacgccctaatcggaggcctg
tactacatcgacaggattcacagagtatctctcatcgcgagaacagagattgagtttggg
atgtacttccaaggagacagcaacattctgattacaatcctcatgcctatagtacactgc
ggtttgctgtacgtcttgctgagggtgctggatgtgcgaagcacaggtggcaatagcaaa
gaggctttgaactgtcagggaacctccaaagtcaatgacatccccgaggacaaccaagat
gtcatcggcgatgaagatgaagacgtcgcagaggagagaaacagggttaattcccttcaa
acaggagctcaggacgctcctgtagcctatgttcagaacatcaggaaagaatttgctaag
gacatcaaagcattctgtaagaaaactaagcaaaaaaccaacgttgctgtgagaaatgca
acatttgccgtggactgtggggaagtgtttggacttctgggacctaacggtgctggcaag
accacagctctcaacatgatcattgccgagactggacccactaggggaaaggttattgta
gctggacacgatatacggtcaagtatgtcgtctgctttccaagccatgggctattgcgcc
cagcatgatgcattatgggagaagatcactctacgtgagcacattgaattctatggcttg
cttcgtggcctctcacagaaagacagtgtaaccatggcagatggcatgatcgcatctctg
aaggttgaagaacatgctaagaaaggagccaagaagctgtctggaggaacaaaaaggaag
ctgagctacgccatcagcatgctgggcagtccagagattgtgctgcttgatgaaccttcc
accgggatggaccctcagtccaagagattcctctgggatacaatcagtgggagtttcgag
ggcaccaagcgaggcgccatcctcaccacccactacatggaggaggcagatgccctctgc
tccagagtcgccatcatggtcaatggaaagattgagtgtctgggtcctacacagcacctg
aaggacaagtacggcagcggctacctcctggaggtgaaactgaagacagggggacatgga
gaagacattgaggctaggatggacagtttggagagccatgttgtagctctgtttccacag
gcctcctgtatggagagattcgaggaacgaggacagtacaagatacccagggataatgtc
aaatccttatcagaaactttctcatctcttgaacaaactaaacaaacccatgatgtagag
gagtacagtttcagtcagtccactctggaacaggtgttcctggactttgccaagaagcag
catgaagaaggagaagaggacaatgtgccgaaatctctgatgaggcagctgtctgatgcg
ggaggacacagggacagcgacagccgcggcagaggcaacatcagtgtgcgcatgtga
DBGET
integrated database retrieval system
