KEGG   Haliotis cracherodii (black abalone): 139468209
Entry
139468209         CDS       T10814                                 
Name
(RefSeq) DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hcra  Haliotis cracherodii (black abalone)
Pathway
hcra03030  DNA replication
hcra03410  Base excision repair
hcra03420  Nucleotide excision repair
hcra03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hcra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    139468209
   03410 Base excision repair
    139468209
   03420 Nucleotide excision repair
    139468209
   03430 Mismatch repair
    139468209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hcra03032]
    139468209
   03400 DNA repair and recombination proteins [BR:hcra03400]
    139468209
Enzymes [BR:hcra01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     139468209
    6.5.1.6  DNA ligase (ATP or NAD+)
     139468209
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     139468209
DNA replication proteins [BR:hcra03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    139468209
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     139468209
DNA repair and recombination proteins [BR:hcra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     139468209
   NER (nucleotide excision repair)
    Other NER factors
     139468209
   MMR (mismatch excision repair)
    Other MMR factors
     139468209
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 139468209
NCBI-ProteinID: XP_071106130
LinkDB
Position
Unknown
AA seq 1033 aa
MQKSIMSFFSSKTKEKEPEESVTVKKEDKSPLKVKNGSPSKESDSPIKAPSRKKKARIIE
SDDEEENVDVVMEETDEGKGDNPDVKSSQEKSKEEKPVTTVIKTPHKDKPEGKDSGVSSQ
SSPSEPSTPVKSPCGIPKRKTARKSMGGGSAVKRKSVSQSPKIDSPAKRKKKLISDDEEE
EGQDSETGVEEIKQDDIEMKELSSEENSPESKDKDEETEAKDEPKDDKEQDVSMSEEQED
STDKRKDSKGKKESKGKKGKSPATKKTTGKKSPKANSKKNLTKEEKKEVKDKDNEKEEEK
DSEKEELKENEKKEDKKPVHSFFAPRKPVKVEEKEESKSDVKKEVTKSDVKKEQETPDKK
IKKESPSPSSGKKSSDGEYHPSKSKYHPVDDACWKHKEKVPYLALSKTFEAIEDTSARLK
MIEILSNFFRSVIALSPGDLLQCVYLCLNKLAPAYAGLELGIGETVLMKAIAQATGRSVD
KIKTDAQEKGDLGLVAESSRSTQRMMFAPPKLTVMSVFTKLKDIANMTGHSVMTKKVEMI
KGLFVACRQSEARYIIRSLGGKLRIGLAEQSVLTALGNAVFLTPPGQEYPPEMVDAGKGI
AADALKKKLDEAALVIKTTYCELPNYDTIIPVLLKEGLEELPKHCKLTPGIPLKPMLAHP
TKGVSEVLRRFENMEFTCEYKYDGERAQIHLLENGKIHIYSRNSEDNTSKYPDIIKRMPN
AVTEEVKSCVIDTEAVAWDPEKKQILPFQVLSTRKRKDADVAEIKVQVCVYAFDLLYFNG
ESLVQQPFRKRRELLRTKFTEVEGEFVFAKSMIASNTEQIEEFLDESIKGNCEGLMVKTL
DVDATYEIAKRSHNWLKVKKDYLDGVGDTLDVVPIGGYLGSGKRTGWYGGFLLACYDEEN
EEFQSICKIGTGFTDEYLEKHTTFLKEHLIDKPKPYYQYDSSHEPDHWFDAVQVWEIKVA
DLSISPTHKAAAGLVDPEKGISLRFPRFLRIRDDKKTEQATSATQVAEMYQNQHQIQNQQ
KGGKKEEDEEDFY
NT seq 3102 nt   +upstreamnt  +downstreamnt
atgcagaagtcaataatgtccttctttagttccaagacgaaggagaaagagcctgaagaa
agtgttactgtcaaaaaagaagacaaatcaccacttaaggttaaaaatggatctccatca
aaagaaagcgactctcctatcaaggctccatctcgaaagaagaaggccagaatcattgag
agcgatgatgaagaagagaatgtcgatgttgtgatggaggaaacagatgaaggcaaggga
gataatccagatgtcaaatctagtcaagagaaatctaaggaagagaagccagtgacgact
gtgattaagacaccacacaaagataaaccagaaggaaaggattcaggtgtgtcatcccaa
tcctctccctcggagccaagcacacctgtcaaatctccatgtggaattcctaaaaggaaa
acagcaaggaagagcatgggtggcggaagtgctgtgaagaggaagagtgtctcacagagt
cccaaaatagacagtcctgccaagaggaagaagaagctgatctcggatgatgaggaggaa
gagggacaagactctgagacaggtgtagaagaaataaagcaggacgacatcgagatgaaa
gaactaagctctgaagaaaacagtcctgaatcaaaagataaagatgaagaaactgaagca
aaggatgagccaaaggatgacaaggagcaagatgttagcatgtcggaggaacaggaagac
agcactgataagagaaaggactccaagggaaagaaggaaagcaagggaaagaaaggaaaa
tctccggctaccaagaagacaactggtaagaaatcaccaaaagcaaacagcaagaagaat
ctaacgaaagaagaaaagaaagaagtgaaagacaaagataatgagaaagaagaagagaaa
gacagtgaaaaggaagaattgaaagagaatgagaagaaagaggataaaaaacctgttcac
agcttttttgctccaagaaagcctgtaaaggttgaagaaaaagaagaatcaaagtctgat
gttaaaaaagaagtaacaaagtctgatgttaaaaaagaacaagaaacacctgataaaaaa
attaagaaagaaagcccatctccaagtagtggcaagaaatcctcggatggagagtatcac
ccctcgaagtccaagtaccatcctgttgatgacgcatgctggaagcacaaggaaaaagtt
ccatatctggcactttcaaaaacatttgaggccatcgaggatacatctgctaggctaaaa
atgattgagatcctcagcaacttcttccgatcagtgatcgcactgtctccaggtgatctg
ctccagtgtgtgtacctctgtctcaacaagctggccccggcctatgccggcctagagctg
ggcatcggggagacagtgctcatgaaggccattgctcaagctacaggtcgcagtgtagat
aaaataaaaacagatgcacaagaaaagggagatctcgggttggtggctgagagcagccga
agtacccagcggatgatgtttgcaccacctaaactcactgtgatgtcagtgtttaccaaa
ctcaaggatattgccaatatgactggacactcagtgatgaccaagaaggtggagatgatt
aaaggattatttgtcgcctgccgacagtcagaggctcgatacataatccgatcgctggga
ggcaagttgcgaatcggcttagcagagcaatcagtacttacagcactagggaatgctgtc
ttcctcacacccccagggcaagagtaccccccggagatggtggatgctgggaaaggcata
gctgctgatgctctcaagaagaaactggatgaggcagcacttgtgatcaagacgacctat
tgcgagctgcccaactatgacaccatcatccccgtgctgctgaaggagggtctggaggag
ctgcccaaacactgcaagctgacaccaggtattcccttgaaaccaatgttggcgcaccca
acgaagggtgtgagcgaggtgctacgccgatttgaaaacatggaatttacctgtgaatac
aagtacgatggggagagggcgcagatccatctcctggagaacggcaagatccacatctac
agccgaaactccgaagacaatacctccaaatacccggacatcatcaagcggatgccgaat
gccgttacggaggaggtgaagtcgtgtgtcatcgacacggaggccgtagcctgggaccct
gaaaagaagcagatcctacccttccaggttctcagtaccaggaagagaaaggatgctgac
gtggctgagattaaagtccaagtgtgtgtgtatgcctttgaccttctatacttcaacggc
gagtctctagtccaacaacctttcagaaagaggagagaactgttgcgtaccaagttcaca
gaggttgagggagagtttgtatttgccaaatccatgatagcatctaatacagaacagata
gaggaattcttggatgagtccataaaaggtaactgtgaggggctgatggtgaagactttg
gatgtggatgccacgtatgagatagccaagagatcacacaactggctcaaggtgaagaag
gactacctggatggtgtaggggacaccctggatgtggtgcccattgggggctacctgggc
tctggcaagaggaccgggtggtacgggggcttcctgcttgcctgctatgatgaggagaat
gaggagttccagtccatctgcaagattggcactggcttcacagatgagtacctggagaag
cacactactttcctgaaggagcatctcatagataaaccaaagccctactaccagtatgac
tccagtcacgaacccgaccactggtttgatgcagtccaggtgtgggagattaaggtcgct
gacctctcaatatcccctacccataaggccgcagcgggactggttgatccagaaaaaggg
atatcgttgagattcccccgctttttgcgtatccgtgatgacaagaagaccgaacaagca
acatccgccactcaggtggccgagatgtaccagaaccagcatcagattcagaaccaacag
aagggagggaagaaggaagaagatgaggaagacttctactga

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