KEGG   Haliotis cracherodii (black abalone): 139468631
Entry
139468631         CDS       T10814                                 
Name
(RefSeq) collagen alpha-2(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
hcra  Haliotis cracherodii (black abalone)
Pathway
hcra04382  Cornified envelope formation
hcra04512  ECM-receptor interaction
hcra04518  Integrin signaling
hcra04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:hcra00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    139468631
   04518 Integrin signaling
    139468631
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    139468631
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    139468631
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hcra04147]
    139468631
   00536 Glycosaminoglycan binding proteins [BR:hcra00536]
    139468631
Exosome [BR:hcra04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   139468631
Glycosaminoglycan binding proteins [BR:hcra00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   139468631
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 139468631
NCBI-ProteinID: XP_071106854
LinkDB
Position
Unknown
AA seq 998 aa
MPGVPGTTGQPGRAGGRGAIGHPGPMGDVGPHGPKGDKGLAGFDGVMGPRGFRGPVGVPG
MPGKNGKTGETGPPGEEGMRGLPGCDGLHGVSGEPGSPGVPGSMGPRGPPGVSVPGIRGP
PGLPGLPANHTLDGAPALVNMITKIAKGLKGEKGERGLRGPYGFPGFRFPAVKGSRGLPG
PRGYAGKDGLPGPPGSPGIPGKPGGSGPVRGLLGPRGEKGSIGTPGRDGLPGLHGPKGSL
GVGLPGSKGSKGEEGMVGMPGRSGRDCPPGAELPGLPGMPGPPGPRGLSVKGEKGYHGTI
GPSGKRGRKGVAGKPGPVGEKGERGYSGPPGPPGGAVTEAGTVVGPIGQKGEQGEGVRGQ
TGPRGFPGVSGEPGRDGLPGLDGEDGLPGSPGTPGEGIPGMRGPKGMSGTPGVPGEMGFP
GEKGESGIAGPPGRPGPQGLQGQGLPGLDGLNGVKGSKGTPGREGYPGEPGAPGERGVKG
ESGLSSDGIKGEKGAPGEGLNGRDGVEGRPGVKGEKGAAGLPGEPGRDGEPGRPASDADS
IPGIKGERGLTGLDGERGYPGSDGPQGPPGVPGEKGEQGLQGLPGLDGLDGQIGLSGANG
LNGEPGAPGWDGDKGEAGEPGPRGYPGEMGMPGEQGYGVEGPRGQKGEPGEVASGLQGER
GEPGPLGQTGLPGLRGLPGGDGQKGERGQPGFGMKGFKGDKGMVGMGRPGPRGERGDPGI
KGEVGPEGPSGPAGFGEQGEKGEAGVGIPGLTGSKGERGEGLPGSRGTPGLAGPSAYIYV
RHSQGQRTPPCVSWHPSLWTGYSILHTEDEGRAHSQDLGLGGSCVSRFSPMPILFCNIHN
VCNYASRTATSYWLSTGEVIPMMPVEGAAMLTYISRCTVCQAPAPVIAVHSQTPQNPDCP
QDWEELWTGYSFVMHAVGSMSGGQPLASPGSCLESFSTNPFIECTSSGQCHYFSDKFSFW
LATVPDRNNFTPAQETLKAGQHLSRISRCKVCMLTVPV
NT seq 2997 nt   +upstreamnt  +downstreamnt
atgcctggagtgccggggactacagggcaaccgggtcgagccggtgggagaggcgcgatc
ggccacccgggaccaatgggagacgtgggtccccatgggccgaagggggacaaggggttg
gctggttttgatggcgtcatgggaccaaggggctttagaggtccggtgggagtacctggg
atgccaggcaagaatggtaaaacgggagagactggtcccccaggagaggagggcatgcgc
ggacttcctggatgtgacggactgcacggagtcagtggggagccagggtcacctggtgtt
ccaggatctatgggtccgaggggtcctccgggtgttagtgtgccgggtatccgaggtccc
ccgggcctgcccggcctcccagcgaaccacaccctagacggagcacctgccctcgtcaat
atgattacgaagattgccaaaggcctgaaaggtgaaaaaggagagcggggactgagaggg
ccgtacggattcccagggttccgcttcccagcagtaaaagggtccagaggtctccccggg
ccacgtgggtacgcagggaaagacggcctccctgggcccccgggctctccaggcataccc
gggaaaccaggggggtctggccctgtaaggggcttactcggaccccggggagagaaaggg
tctataggcactccaggacgtgacggtctccccgggctacatggccctaaaggcagcctt
ggggtcgggctccctggcagtaaaggttcaaagggagaggaagggatggtcggtatgcca
ggacgctcgggtcgggattgtccaccaggggcggagctaccagggctcccagggatgcca
ggaccccccgggccacgagggctgtcagttaaaggcgaaaagggctatcacggaacaatt
gggccgtcaggaaagcgaggccggaagggtgtggccgggaaaccgggacctgttggtgaa
aaaggggaacgcgggtattccggtcccccaggtcccccgggaggagcggtcacggaggca
ggaactgtagtagggcccattgggcagaagggggaacaaggggagggcgtgagaggtcaa
acaggtcctagaggattcccgggggtgagtggcgagcctgggagggacgggctacccggt
ctggacggtgaggatggactgccgggatcccccggaactcctggagagggaattccgggt
atgcgaggcccgaaggggatgtctgggactccaggggtgccgggggagatggggttcccg
ggagagaagggggaaagcggaattgcgggacccccgggtcggcctggcccacaaggcctg
caaggtcaaggtctccccgggctagacggtctcaatggcgttaaggggagcaaggggacg
ccgggtagggagggttaccctggagaaccgggcgccccgggggagagaggagtgaagggg
gagtcgggtttatcctctgatgggatcaagggcgagaagggagcccctggtgaaggtctg
aacgggagggacggggtggagggacgacctggagtcaagggggagaagggagctgctggt
ctgcccggagagccagggagggacggggaaccagggagacccgcatcagatgctgacagt
ataccagggatcaaaggtgaaaggggcttaactgggctggacggcgagaggggttaccct
ggatcagacggtccccagggaccaccaggggttcctggggagaagggggaacaaggtctg
cagggtctaccagggcttgacggtctagatggacagatcggcctttctggggctaatggt
cttaacggcgagcccggggccccggggtgggatggggacaagggcgaggcaggggaacca
ggaccccggggctacccaggggagatgggaatgccgggagaacaggggtatggagtggag
ggacctagaggacagaagggggagcccggagaagtcgccagcgggttgcagggggagagg
ggcgaaccaggccctctgggtcagactggattgccaggcctccggggcctgcctgggggt
gacggccagaaaggagagcggggacagcccggctttgggatgaaaggcttcaaaggcgac
aagggcatggtcgggatgggcaggcccggcccccggggggagagaggtgaccctggaatt
aagggtgaagtcggcccagaaggaccctcgggaccagccgggtttggagaacagggagag
aagggtgaggcaggggtcgggattccgggactcacgggatccaagggggagcggggagaa
ggcctgccgggatccagaggaacaccaggtctagccggaccctctgcgtacatctacgtc
cgtcacagccagggtcagcgcaccccaccctgcgtgtcctggcacccctcactgtggacc
gggtacagcatcctccacaccgaggatgaggggcgggctcactcacaggatctcggtctg
ggtggttcctgtgtcagccgattcagtccaatgcccatcctcttttgcaacatccataac
gtctgcaactacgccagccgcacagctaccagctactggctgtccacaggggaggtaatc
cccatgatgcctgtagagggcgctgcaatgctgacgtatatcagccgatgtacagtttgc
caggcccccgcgccagtcatagcagttcacagtcagacgccccagaaccccgactgcccc
caggactgggaggaactgtggactgggtacagctttgtcatgcatgccgttggatcaatg
agcggaggacaaccactagcaagtccgggaagctgtttggagtctttttcaacaaaccca
tttatagaatgcacaagctccggacagtgccactacttctccgacaaatttagcttctgg
ttggccacagtaccggacagaaataacttcacccctgctcaggagactttaaaagccgga
caacatctctctcgtatcagtcgatgtaaagtctgcatgctgactgtgccggtatga

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