Haliotis cracherodii (black abalone): 139469263
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Entry
139469263 CDS
T10814
Name
(RefSeq) DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03440
Homologous recombination
hcra03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139469263
03460 Fanconi anemia pathway
139469263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcra03032
]
139469263
03400 DNA repair and recombination proteins [BR:
hcra03400
]
139469263
Enzymes [BR:
hcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
139469263
DNA replication proteins [BR:
hcra03032
]
Eukaryotic type
DNA Topoisomerases
139469263
DNA repair and recombination proteins [BR:
hcra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
139469263
FA (Fanconi anemia) pathway
139469263
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_GRF
DUF4796_N
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
139469263
NCBI-ProteinID:
XP_071107508
LinkDB
All DBs
Position
Unknown
AA seq
880 aa
AA seq
DB search
MFKTFVRFRSNVSEMVRVLNVAEKNDAAKSLADVMSRGGYRKREGFSRFNKIYEFDYRIL
NQQCTMTMTSVSGHLLGMDFGTQYRKWNSCSPTSLFDLPVFKSCPDNYVDIKRTLEREIK
GCRYLVIWTDCDREGENIGFEVIQVCQSVKPNIEIYRARFSEITPHAVNRAISNLQAPDK
RVSDAVDVRQELDLRIGAAFTRFQTLRLQKVFPEHLSQQLVSYGSCQFPTLGFVVERYKQ
VQAFVPEPFWKLKVAHILDDIKADFLWKRNRLFDHLACLVLFEQCIENPIATVLEVKSKN
KSKWRPQALDTVEMEKLASRKLRINAKETMKIAEKLYTQGFISYPRTETNIFPKEMDLQS
LVQDQTRDPNWGGFAQRILDQGLHPRNGNKTDNAHPPIHPIKYTATLQGNDQRVYEFVVR
HFLACCSQDAQGMETTVDINIAEERFTASGLMIIARNYLEVYPYEKWNAKEIPIYKQGDQ
FEPSSIEMACSETVPPPLLAEADLIALMEKHGIGTDATHAEHIETIKVRSYVGLRPDGRF
VPGQLGMGLVEGYDEMGYQMSKPHLRSELEADLQRICEGRKDKNIVLREQIEKYKAVFIE
ASQQALKLDEALSQYFGQAHALTGAEVTDIAGPAVVRRCPLCGQDMALKAKKDGKGFYIG
CMGYPQCRAAIWLPEFVLQADIAEETCPQCGPGPVHLIKFRFRRGSTPPMIPSEHTGCIG
GCDHMLTEVLNIQPLAARNNNTSSQANTSLPRRNMNMSDSGYSSSSNTSITSNNTQQRRP
QNSNNTQQRRPQNTNSSGNNSTNRGFSTNTNSSYNNSSRNNTSFTGNHRGGNSRPPLTTM
PQPNPMAPGGGPGDSGSAIVCNCGTDAMQLTVRKEGPNTG
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaacttttgttagatttcggagtaatgtgtctgaaatggttcgtgtcctgaat
gttgcagaaaagaatgatgctgccaaatctttggcagatgttatgtcaaggggaggatat
agaaagagggaagggttttccaggttcaataagatttacgagtttgattatcgtatacta
aatcaacaatgtaccatgacaatgacttcagtgtctggacatctcctggggatggacttt
ggaactcagtacaggaaatggaactcctgtagtcccacatctctgtttgaccttccagtg
ttcaaatcttgtcctgacaattatgttgacatcaagcgtaccctggagagagaaattaag
ggttgcagatatcttgtaatttggactgattgtgacagagaaggggaaaacattggtttt
gaagtgatccaggtttgtcagtcagtgaagccaaatatagaaatctaccgagcaaggttt
tcagaaattacgccccatgcagtgaaccgagccatcagcaatctccaggctccagacaag
cgtgtgagtgatgctgttgatgttagacaggagctggacctcaggattggtgcagcattc
acaaggtttcaaaccctacgtttgcagaaagtgtttcctgagcatttaagtcaacagctt
gtaagctatggcagttgccaatttcctacacttggctttgtggtggagagatacaaacag
gtccaagcctttgtgccagaacccttctggaaacttaaagtggctcatatacttgatgac
atcaaggcagacttcctatggaaaagaaaccgcctgtttgaccatcttgcatgtcttgtg
ctctttgaacagtgcatagagaacccaatagcaacagtgctggaagtgaagagtaaaaac
aagagcaaatggcgaccccaggctctggacacagtggaaatggagaagctggcatccagg
aaactgaggattaatgccaaggaaaccatgaagatagcggagaagctctacacacagggg
ttcatcagctatccacgtacagagaccaacatcttccccaaggagatggatcttcagagc
ctggtgcaggaccaaacacgagaccctaactggggaggttttgcacaaagaatcttggat
caaggccttcatccacgaaatggcaacaagactgacaatgcccatcccccaatacatccc
atcaagtacacggccactctgcagggaaacgatcagcgtgtgtatgagttcgtggtccgt
cactttctggcgtgctgctcccaggatgcccagggcatggagacgacagttgatatcaac
atagcagaggagaggttcacagccagtggtctgatgatcattgccaggaactaccttgag
gtctacccatatgagaaatggaatgcaaaggaaattcctatctacaagcagggagatcag
tttgaaccaagttctattgagatggcgtgtagcgagacagtgccccctcctttgttagct
gaagcagacctgatagctctcatggagaaacacggaataggtactgatgccacccatgca
gagcacattgaaaccatcaaagtccgaagttatgtcggtctccggcctgatggacgtttt
gtgcctgggcaactagggatggggttagtggaaggttatgatgagatgggataccaaatg
tccaagccgcacctcagatctgaattggaagccgacctacaaaggatttgtgaagggcga
aaagataagaatattgtactgcgggagcagattgagaagtacaaggctgtgtttatagag
gcgagccagcaggccttgaagctggatgaagctctgtcgcagtacttcggacaagctcat
gctctcacaggagctgaagtgacagacattgctggtccagctgttgtccgcagatgtcca
ctgtgtggtcaggacatggctctgaaggccaagaaagatggtaaaggcttttacattggc
tgtatggggtaccctcagtgccgtgctgccatctggctgccagagttcgtcctccaggct
gacatagcagaggagacctgtcctcagtgtggtccaggaccggttcatctgatcaagttc
aggttcagacgaggatcaacaccacccatgataccctctgaacacactggctgtatcggt
ggttgtgatcacatgctgacagaagtcctcaatattcagcctctcgctgccagaaacaac
aacaccagctctcaagccaacacatcattgcccaggagaaacatgaacatgtccgacagt
ggctacagcagcagcagtaacacaagcatcaccagcaacaacacacaacaacgcagacca
cagaacagcaacaacacacaacaacgcagaccacagaacaccaactcaagcggaaataac
tctactaatagaggcttctccacaaacacaaactcttcctataacaatagttcaagaaac
aatacatctttcactggtaaccacaggggaggtaactctcggccacctctgacaaccatg
cctcagcctaatccaatggcacctggtggaggaccaggagattctgggtctgccattgtg
tgtaactgtggcactgatgccatgcagctgactgtcaggaaggagggacctaacacaggt
tag
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integrated database retrieval system
