KEGG T10814: 139469303

Haliotis cracherodii (black abalone): 139469303

Entry

139469303         CDS       T10814

Name

(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like isoform X1

K14404

cleavage and polyadenylation specificity factor subunit 4

Organism

hcra Haliotis cracherodii (black abalone)

Pathway

hcra03015

mRNA surveillance pathway

Brite

KEGG Orthology (KO) [BR:hcra00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    139469303
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hcra03021]
    139469303
   03019 Messenger RNA biogenesis [BR:hcra03019]
    139469303
Transcription machinery [BR:hcra03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     139469303
Messenger RNA biogenesis [BR:hcra03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     139469303

SSDB

Motif

Pfam:

zf-CCCH zf_CCCH_4 Torus zf-CCCH_3 zf-CCHC zf-CCCH_2 zf-CCCH_12 zf-CCCH_RBM22 zf-CCCH_4 zf-C3H1 zf-CCHC_3 Nab2-like_zf-CCCH_

Other DBs

NCBI-GeneID:

139469303

NCBI-ProteinID:

XP_071107543

LinkDB

Position

Unknown

AA seq 258 aa
MQEIVAPVYNITFDIEVALDQQLGALPLPFPGMDKSGSATCIFHLRHQCNKGTACPFRHV
RGDRTVVCKHWLRGLCKKGDDCEFLHEYDMSKMPECYFYSKFGQCSNKECPFLHIDPEKK
MKDCPWYDRGFCRHGPNCKNRHVRRLICQSYVNGFCIEGPSCKYQHPKFDLPVSDPVQQA
KKASIVCHFCGEAGHKVLNCTKMPNNVKMEQIMQMNDTSICDQRRPLDQVTCYKCGEKGH
YANRCTKGHLAFLSSSAT

NT seq 777 nt +upstreamnt +downstreamnt
atgcaggagattgtggcgcccgtgtataatataacgttcgacatagaagttgccttggat
cagcaactaggggccctgccgttgcctttccctggcatggacaaatctgggtcagcaaca
tgtatcttccatctacgacatcagtgtaacaaggggacggcatgtcccttccgtcatgtt
cgaggtgacagaacagttgtgtgcaaacattggcttcgtggactctgtaagaagggagat
gactgtgaattcttacatgagtatgacatgtccaagatgccagagtgttatttctattcc
aaatttggtcagtgtagtaataaagaatgtccgtttcttcacatcgatcctgaaaagaag
atgaaagattgtccatggtatgacagaggtttctgtcgtcatggtcctaattgcaagaac
agacatgtgaggagactgatctgtcaaagctacgtcaatggcttctgtattgagggcccc
agctgtaaataccagcatcccaagtttgacttgccagtcagtgacccagtccagcaggcc
aagaaggcgtccattgtctgtcacttctgtggagaggcaggtcacaaagtgctcaactgt
accaagatgcccaacaatgtcaagatggagcagatcatgcagatgaacgatacttccatt
tgtgatcaacgccggcctctcgatcaggtcacttgttacaagtgtggcgagaagggtcac
tacgccaacaggtgcaccaagggtcacctggccttcctcagctccagtgcaacataa

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