Haliotis cracherodii (black abalone): 139469486
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Entry
139469486 CDS
T10814
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
139469486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hcra03036
]
139469486
03400 DNA repair and recombination proteins [BR:
hcra03400
]
139469486
Chromosome and associated proteins [BR:
hcra03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
139469486
DNA repair and recombination proteins [BR:
hcra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
139469486
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DUF2179
Motif
Other DBs
NCBI-GeneID:
139469486
NCBI-ProteinID:
XP_071107772
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MMASAATGLGAQRSAILIEAEPIAGPSSMADDMEEGEVAEEKKAGFHVNTRLIPKALLEE
HSELEGLGLGVFNQQDFEEGVMAQADQAMALQEEERLRRILTKEMTAVDDDFKMANQELT
HINKVMESMPQSTEGVSRDVRHTIEAIKKQRDNKLKHLKKLESRKSVLQTKMDNVKIDAG
VLVAPLGQQGKGLEAGLTSGKKRESERDRMIRLGHMTPFGTIIKNKKQAKLKQRTTTSKD
GASKKKHKLSANGKSGVNHSVDGLSPVKKRKSEKSNLFDERDHKLYDRETDYTQARYQRR
GRRSYGNGEASFGDEENDRDDSGGEWQPSEQAIEEEDDALELLERRKERKAFLPERHVPP
AYVDGVAKQQIMKVKKDTSIHKAKDDGDERFYQRRLKEYQRTELLKKFERESKMDARGDD
DNDSEEDEEFEGGLQVPGCIWKNLYQYQRVGVRWLWELHCQEAGGIVGDEMGLGKTIQTI
AFLAALKYSKLRNKNFPYSGLGPCVIVCPATVMHQWVKEFHKWWPPFRVAILHSSGSYSG
KERDLVYGVVRNQGVLVTSFSTLVIHQDVVLPYNWHYVFLDEGHKIRNPDAQITLACKQF
RTPHRVILSGSPIQNHLKELWSLFDFIFPGKLGMLPDFLQHFSVPIVQGGYANATQVQVE
TAYKCATVLRDTINPFLLRRMKADVKVGLNLPQKNEQVLFCRLTEEQREVYQEYLDSREC
QAILSGKYKIFAGLITLRKVCNHPDLSTGGPRILVGEDTHGDETLDYGYYKRSGKMMVVE
ALLKLWQKQEHRVLLFSQSRTMLDIMEFFVQKQMYSYLRMDGTTPISSRQQLIDQFNKNP
SIYVFLLTTRVGGLGVNLTGANRVIIFDPDWNPSTDTQARERAWRIGQKKQVTIYRLLTS
GTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDIYELFTLTDLGDGEGTETSAIFAGT
GSDVTVPRPVKKQETAKSKVNRFDEMKKESKSSKEDSFENTFDTDEIQRMREMARMLSQR
MEKDKNNTKSEPGGALNGAHAASKRDSDHKTPLAKDTLRDVDRKQKKKKKKKRNRDAKFE
GERIPHLDRKSDYKDKDEDADQKKNDDYVLQELFKKTGIQGALQHDKIMSSGRPDFALVE
AEAEKVAKQAVAALKKSRSHCHSALDGIPTWTGQHGGGAKPKFGKKKNSLLADKIQPRTP
PPSATVSKMPEKSNEDKMFDGSMSGAVALTANAAVMSSDDLLSKMRRRHNLSKQGDEDIG
GNPDKVDTKDLDLMTDIRNYIAFQCHIDGQAATRELLDQFGPRLPKGGAACFKAMLNQIC
DLDKSSGVGIWRLRTEFR
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatccgcggcaacaggattaggtgctcagagatctgccattttgattgaagct
gagccaatagcaggaccatccagtatggctgatgatatggaagaaggggaggtggccgag
gagaagaaggcaggcttccatgtcaacacaagactcatccctaaggctctgctcgaagaa
cactcagagctagaaggtctgggacttggtgtcttcaaccagcaggatttcgaagaaggt
gtgatggcccaggcggaccaggctatggcgttgcaggaagaggagaggttacgtcgaatt
ctcacgaaggagatgacagccgttgatgacgacttcaaaatggccaatcaggaattgact
cacatcaacaaagtgatggaatcaatgcctcagtctactgagggagtcagtcgagatgtg
aggcacacaatagaagctattaagaaacagagagacaataagctgaagcatctgaaaaag
ttggaatcaaggaagagcgtattgcagactaagatggacaatgtcaagattgatgcaggt
gtgctggtagcaccactcggacaacaaggaaaaggtcttgaagcaggtttgacatctgga
aaaaagagagaatcggagagagacaggatgataagacttggtcacatgactccctttgga
acaattatcaagaacaagaaacaagccaaacttaaacagcgaacaaccacttcaaaggat
ggtgcaagcaagaaaaaacataaactgtctgccaatggtaaatcgggtgtgaaccacagt
gttgacggtctgtctcctgtgaaaaagaggaagagtgagaagtctaacctgtttgatgag
agggaccataagttgtatgatcgggagactgactacactcaagcaaggtaccagcgtcga
gggagaaggagttatgggaatggagaagcatcatttggagatgaagagaatgaccgggat
gacagcggtggtgaatggcagccatcagaacaggccattgaggaggaggatgatgcatta
gagctgttagagaggaggaaggaacggaaggcgtttctaccagagaggcatgttcccccg
gcatatgttgatggtgtcgcgaagcagcagataatgaaggtgaagaaagacaccagcatc
cacaaggccaaggatgatggggatgagagattctaccagaggagactgaaggaataccag
aggactgagctgctgaagaagtttgagcgcgagtcaaagatggatgcgagaggggacgat
gataatgactcggaggaggacgaggaatttgagggaggactccaagtgccaggatgtatc
tggaaaaacctctaccagtaccagagagtgggggtgcgatggttgtgggagctccactgc
caggaggctggtggtattgttggcgatgagatgggacttggcaaaaccattcagactatt
gcattcctggcggctctcaaatacagtaaactgcgcaacaaaaactttccatattcgggc
ctgggaccatgtgtgattgtatgtccagcgactgtgatgcatcagtgggtgaaggagttt
cacaaatggtggcctccattccgggtggccattctgcactcatctggttcgtacagtggc
aaggagcgtgacttggtgtatggggtggtgcggaaccagggggtgctggtcacctccttc
agcaccctggtcatccaccaggacgtcgtcctgccctacaactggcactacgtcttcctg
gacgagggacacaagatacgcaacccagatgctcagatcacgctcgcctgtaaacagttc
cgcacgccgcaccgagtcatactctccggctccccgatacagaaccacttgaaggagctg
tggtcactgtttgacttcatcttccccggcaagctgggcatgctccccgacttcttgcag
cacttctccgtgcccatcgtgcagggaggctatgccaacgccacccaggtccaggtggag
accgcctacaagtgtgccactgttttgagagatacgatcaatccgttcctgctgcgcaga
atgaaagctgatgtcaaagtaggcctaaatctacctcagaagaatgaacaggtgctgttc
tgccggctgacggaggagcagagggaagtgtatcaggagtacctcgactcccgggaatgt
caggccatcctctccggcaagtacaagatatttgctggtctgatcacactgcggaaggtg
tgtaatcatcctgacctgtcgacaggtgggccccggatcctggtgggagaggacactcat
ggggatgagacgctggactatggctactacaaacgatcagggaagatgatggtggtggag
gcgcttctgaagctgtggcagaagcaagaacacagggtcttgctgttcagtcagagtaga
acgatgctggacatcatggagttttttgttcagaagcagatgtattcctacctccgtatg
gatgggaccacacccatttcttcccggcagcagctcattgaccagttcaataagaatcca
tccatctatgtgtttctgctgacaacacgagtcgggggtctgggtgtgaacttgactgga
gcgaaccgtgtgataatctttgacccggactggaaccccagcaccgacacccaggctcgt
gagagggcgtggaggatcggacagaagaagcaggtcaccatctacaggcttctcacatct
ggcaccatcgaggagaaaatataccacaggcaaatcttcaagcagtttctaacaaaccgc
gtgttgaaagatcctaaacaacgtcgcttctttaaatccaatgacatctatgaactattt
accttgactgatcttggagatggtgagggcacggagaccagcgccatctttgcagggact
gggtcagatgtcacggtcccaaggccggtgaagaaacaagagacagcgaagtcaaaagtc
aacaggtttgatgaaatgaaaaaggaatctaaatcctcaaaagaagattcatttgaaaat
acttttgacacagatgagattcagcgtatgcgagagatggccaggatgttgagtcagagg
atggagaaagataagaacaacaccaagagtgaacccggtggagccttgaatggggcacat
gctgcctcaaagcgagacagtgatcacaaaacacccctcgcaaaggacaccctcagggat
gtggataggaaacaaaagaaaaaaaagaagaagaagaggaatagagatgccaagtttgag
ggtgagcggatcccccatctcgaccgaaaaagtgactacaaggacaaggatgaggacgca
gaccagaagaagaacgacgactacgtcttgcaggaactcttcaagaaaacaggaatccag
ggtgcactgcagcatgacaagatcatgagctccggacgacccgactttgctctggtggag
gctgaggcagagaaagtggccaaacaggccgtggctgcactgaagaagtctcgatctcac
tgccactccgccctggacggaattccaacatggacagggcagcacggtggaggagccaaa
cctaaatttggaaagaagaaaaacagcctccttgctgacaagatccaaccccggacgcca
ccaccatctgctactgtatctaagatgccggagaagtctaacgaagacaagatgtttgat
ggaagtatgtccggggcagtggccctgacagccaatgcggcagtcatgtcgtccgatgac
ctcctgtcgaagatgaggcgcagacacaatctgtcaaagcagggggatgaggatattggc
ggaaaccctgacaaggttgacacaaaagaccttgaccttatgacagacattcggaactat
attgcattccagtgtcacatcgatggacaggcggcaacgcgggaactactagatcagttt
ggtcctcgcttgccaaaagggggcgctgcatgcttcaaggcaatgctcaatcagatctgt
gaccttgacaagtcaagtggtgttggaatatggagactgagaactgagtttagatga
DBGET
integrated database retrieval system
