Haliotis cracherodii (black abalone): 139471245
Help
Entry
139471245 CDS
T10814
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN-like
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139471245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139471245
03400 DNA repair and recombination proteins [BR:
hcra03400
]
139471245
Enzymes [BR:
hcra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
139471245
Messenger RNA biogenesis [BR:
hcra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
139471245
DNA repair and recombination proteins [BR:
hcra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
139471245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
RecQ_Zn_bind
DEAD
zf-4CXXC_R1
Motif
Other DBs
NCBI-GeneID:
139471245
NCBI-ProteinID:
XP_071109643
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MKRVKSGCVNFILGHPEHLCSVAVKRFLMSEDISSKISHIIVDEAHCVISWGKPNFRPAF
LKVGDLRAILPQARMLALTATATIKVLHEIQQALCMVNPLIVAETPDRPNIYLEVKVRPP
SPGSGHSVETSYETVLDPVLLTSRTDGIHFDRTIIYLPLKWCGHIHHRAITRSLLLNQEN
QETEQGSVEASLKCFIAQYHAPQTQEMKSLITQQMKKPDGQVRLLLATEAYGMGADSPNV
HSIIHVGPPNTIETYTQEIGRGGRDGLQSSATLYFNKSDIAANNEHLDDAMRQYCLLKSC
RREYLTRYFGFDLARENKHYCCDNCRKLCTCSECHQSKSNFNSSKTGTKHVGKKPVSKIR
IQAARSMLASYFAAENSLVTEICIPSLSTGLSDKLIGVITKDINTYTDVSLLKENFPDVD
MTFATNISAILSKVMSLDLSD
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagtaaagagtggctgtgttaacttcattttgggtcacccagagcacctgtgt
agtgtggctgttaaacgatttctaatgtcagaagacatatcatcaaagatcagtcacatt
attgttgatgaggcgcattgtgtcatatcatgggggaagcctaactttcgaccagccttt
ctcaaagtaggggatttacgtgcaatcctcccacaggcccgcatgctggctttaacagct
acagctaccattaaagttctgcatgaaattcaacaggctttgtgcatggtgaatcctcta
attgtagctgaaactcctgacaggcctaacatttatctagaagttaaagtaagacctcca
tcccctggcagtggtcactctgtggaaacttcatatgaaacagtgctagatccagttctt
cttacttcgagaactgatggaatacattttgacagaaccatcatataccttcctctgaaa
tggtgtgggcacatccaccatcgggccattacaaggtctcttctacttaaccaagaaaat
caagaaactgagcaaggatctgttgaagcatctcttaaatgcttcattgcccaatatcat
gctccccagacacaggagatgaagtcattaatcacacagcagatgaaaaaacctgatggt
caagttcgattgctactggcaactgaagcttatggcatgggtgctgattccccaaatgtt
cattccattattcatgttggtccacctaataccattgagacatacacacaagaaatagga
cggggtggtcgagatggactgcagtcctcagctaccttatacttcaacaagtctgacatc
gctgccaacaatgaacacctggatgatgcaatgcgacaatattgcttattgaagtcttgc
cgaagggaatatctcacaagatactttggctttgaccttgctagagaaaacaagcattat
tgctgtgacaactgtcgcaaattatgcacttgttcagaatgtcaccaatcaaagtcaaat
ttcaattccagcaaaacaggaactaagcatgtggggaaaaagccagtcagtaaaataaga
attcaagctgctagatcaatgcttgccagttactttgctgctgagaattctttagtcaca
gaaatatgtatccccagtttatcaacaggtttgtcagataaactgattggtgtcatcacc
aaagacattaatacttacacagatgtatcccttcttaaggagaattttccggatgtagac
atgacatttgcaacaaacatatcagccatactttccaaagttatgtctctggatctgtcc
gactga
DBGET
integrated database retrieval system
