Haliotis cracherodii (black abalone): 139473237
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Entry
139473237 CDS
T10814
Name
(RefSeq) DNA damage-binding protein 2-like
KO
K10140
DNA damage-binding protein 2
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03420
Nucleotide excision repair
hcra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139473237
09124 Replication and repair
03420 Nucleotide excision repair
139473237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hcra04121
]
139473237
03400 DNA repair and recombination proteins [BR:
hcra03400
]
139473237
Ubiquitin system [BR:
hcra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
139473237
DNA repair and recombination proteins [BR:
hcra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
139473237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
EIF3I
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
139473237
NCBI-ProteinID:
XP_071111867
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MGPRRSKRFQELNNLQEESGATCLRKRPKKTTSQNQKDKKDKTAQSVVDEARENEVKATE
LSTTCRRILNGQTEVKLDFSVRKKELSIAPNLMFPYLQRSLNFIHHQYQASIGLLSHPRL
QHAQGVAGPVVSMVSNMQLFRTGSPFDRRVTAMAWHPSSPNILAAGSKGGDIYLWDINNI
NNNDNFIHGIGPGGSIQAIKFWPWNHRRIITASIDGRVVLQDTDGRKADVLSDTFNCHDF
WYCSVDVSQARKVVVVGDNVGNTLLLSHEGKKIWSHKLHKGKVTHAEFSPREDWSLCTAS
IDHTVKLWDVRMIKDKKSALCVLQHDKGVNSVYFNPSDGCRLLTTDQGSEIRVYRAPEWS
LERTIPHPHRFFQHITPIKASWHPLLDLIVVGRYPDKTFPGYTSGERRTIDVFDANTGAT
VCQLHDPSAPGIVSLNKFSPDGDKLASGMGVNILVWCRQGELETKQQVLLQKYKQGINSS
SDSSQRQPKTRKPTNKQTKSKSLKDTAELKTKLKTKTKKL
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggccctaggagatccaagagatttcaagaactcaacaacttgcaggaagaaagtgga
gcaacatgtttgaggaaacgacccaagaaaacgacaagtcaaaaccagaaagacaaaaag
gacaaaacagctcaatcagttgtcgatgaagctcgtgaaaatgaagtcaaagccactgaa
ctgtccacaacatgtcggagaatcctaaatggtcagactgaagtgaagcttgatttttct
gtgagaaagaaagaactatcaatcgcgcccaatttgatgtttccatatcttcagcgaagc
ctcaacttcatccaccatcagtatcaggcatccatcggtcttctctcacatccccgactc
cagcatgcgcagggcgtggcaggtcctgtagttagcatggtgtctaacatgcagctcttc
cgcactggtagcccgtttgaccgtcgagtgaccgccatggcgtggcaccccagcagcccc
aacattttggcagctggttccaaaggcggagacatctacctctgggacatcaacaacatc
aacaacaacgacaattttatccatggcataggacctgggggatctatacaggccattaag
ttctggccatggaaccacaggcgcatcatcactgcctccattgatgggagagtcgtcctc
caggacaccgacggaagaaaagcagatgtgttgtctgacaccttcaattgtcatgacttc
tggtactgctctgtggacgtgagccaggcacggaaggtggtggttgtcggggacaacgtg
ggcaacacgctgctgttgtctcacgaggggaagaagatctggagccacaagctacacaag
ggcaaggtcacccacgcagagttctcccctcgggaagactggtcgttgtgtaccgcttcc
atcgatcacaccgtcaagctctgggacgtacgcatgatcaaggacaagaagagcgccctc
tgtgttctgcaacatgacaagggagttaactctgtgtacttcaatccatctgatggctgc
cgactcctcaccactgaccagggatctgagatccgtgtgtatcgggctcctgagtggagc
cttgaaaggacaataccacacccacatcgcttcttccagcacatcacacccatcaaggca
tcatggcaccccctcctggacctgatcgtggtgggtcgctaccctgacaagacattcccc
ggctacacgagcggtgagaggcgaacaatcgatgtgttcgatgcaaacacaggggctaca
gtgtgtcagctgcatgacccatcagcaccagggatagtctcgttgaacaaattcagccca
gatggagataagctagcttcaggcatgggtgtgaacatcctagtgtggtgccgacaggga
gaattggagacaaagcagcaggtcctgcttcagaaatacaagcagggaatcaactcgtca
tcagactcctcacagagacaaccgaaaactagaaaaccaacaaacaaacagaccaagtcc
aaatctttaaaagacactgctgagctaaaaactaagctgaaaaccaaaacaaagaaacta
tga
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