Haliotis cracherodii (black abalone): 139474260
Help
Entry
139474260 CDS
T10814
Name
(RefSeq) periodic tryptophan protein 1 homolog
KO
K14791
periodic tryptophan protein 1
Organism
hcra Haliotis cracherodii (black abalone)
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcra03009
]
139474260
Ribosome biogenesis [BR:
hcra03009
]
Eukaryotic type
90S particles
Other 90S particles
139474260
Pre-60S particles
Other pre-60S particles
139474260
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_RFWD3
WDR55
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
MIOS_WD40
NBCH_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Beta-prop_NWD2_C
Nucleoporin_N
Beta-prop_SPT8
CCDC106
Motif
Other DBs
NCBI-GeneID:
139474260
NCBI-ProteinID:
XP_071113291
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MNVVPCLAWVKRGVAERNPHKVELDKQDLKKVIQATREELDELEDEYDPEDEEVQAAGGH
SKIKEEDEDTSQKTKKKKKAKKRKHEEEKEDEEVEDEDIVSKYGLDDYDDEGDEDALISG
VGGLSFYASNEEDPYVTVPKDVDSDEEDFEIKPTDNLVLAGRAHKDHCFLEVYVYNETLG
NLFVHHDYLLSSFPLAVEWLSFSPTDSSTGNYAAVATMEPVIEIWNLDVVDCLEPAAVLG
SKQVKKKKKRPGAAQSHTESVLDLSWNSVVGNVLASASADNTIALWDLAEQKVVTSIRQH
TDKVQAIQWHPREAQTLLSGGFDQTARVYDCRSPEENHKTWEVQGEVEKVLWNNQSPVNF
FVTTDQGIIYYMDIRHDSKPVFTLSAHSEAVTGICLSSATRGLLVTTSSDKMMKVWDMES
GKPSLVLERNLKISELYCVDSCPDAPFVFAFGGEKEMKVWDIRESATVRKHFHSRMSATL
QAECKGDDKDLPDELEEDMIAMATPDMAADDEEEEMMKELGETTGGQGKKKKKKKKKKQK
KEFLNIDCT
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgttccctgtctggcgtgggtgaaaagaggggttgcagaaaggaatcctcac
aaggttgagcttgacaaacaggatttgaagaaagtcattcaggccactcgagaagagctg
gatgaactggaggatgaatatgatccagaagatgaagaagtgcaagccgcgggaggccac
agtaaaataaaagaagaagatgaggatacaagtcagaaaacaaaaaagaaaaagaaagcc
aaaaaacggaaacatgaggaggagaaagaagatgaagaagtagaggatgaggacattgtt
tccaaatatggcctggacgattatgatgacgagggagatgaggatgccctcatcagcggt
gtcggggggctgtcattctacgccagtaatgaagaagacccctatgtgacagtgccgaaa
gatgttgacagtgatgaggaagactttgagatcaaacccacggacaacttggtgcttgct
ggcagagctcacaaggaccactgcttcctggaggtgtatgtgtacaacgagacgctcggg
aacctgtttgtacaccatgactaccttctgtcttccttccccctggcggtcgagtggctt
agcttcagccccacagattcctcaacaggtaactatgccgctgtggccaccatggagccg
gtgatagagatatggaaccttgatgtggtggattgtctcgagcctgcagctgtgcttggc
tcaaaacaggtcaaaaagaagaagaaacggccaggagcggcacaaagtcatacagaatcc
gtgctggacttgtcctggaattccgtggttggtaacgtgcttgccagtgcatcagcggac
aacactattgcattgtgggatttagctgagcagaaggttgtcacttcaatcagacagcac
acggataaggtacaggcgatacagtggcacccgcgggaggcacagacactcctgtctggg
ggcttcgaccagactgcccgtgtgtacgactgtcggagtccggaggagaatcacaagacc
tgggaagtgcagggtgaagtggagaaggtgttatggaacaaccagtccccagtcaacttc
tttgtgacgacggatcaaggcatcatctactacatggacatccgtcacgacagtaagcca
gtcttcacgctgtcagcacactccgaggctgtcacaggtatttgcctgagcagtgccaca
agggggctgctggtgacgacgtcatcagacaagatgatgaaggtttgggacatggagtct
ggcaagccgtcgctggtgttggagcggaacttgaaaattagtgagctgtattgtgtcgac
agctgccccgacgccccgtttgtgtttgcgtttggcggggaaaaggagatgaaggtctgg
gacatccgggaaagtgcaaccgtgaggaagcacttccatagtcgtatgtctgccacccta
caggcggagtgcaaaggagacgacaaggatctacctgacgaactggaagaggatatgatt
gccatggcaacaccagacatggctgcagatgatgaggaagaagaaatgatgaaggaattg
ggggagacaacaggtgggcaggggaagaagaagaagaagaaaaagaagaagaaacaaaaa
aaggaattcttgaatattgattgtacataa
DBGET
integrated database retrieval system
