Haliotis cracherodii (black abalone): 139475730
Help
Entry
139475730 CDS
T10814
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03430
Mismatch repair
Brite
DNA repair and recombination proteins [BR:
hcra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
139475730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139475730
NCBI-ProteinID:
XP_071115020
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MALLPKQELQLDTAQEQGFLSFFRGLPEKSSTTLRVFDRTEYYTVHGQDALFVAKDVYKT
TGVVKHLGTGSNKVESVVLSKMNFESLVRDLLLVRQYRVEVYCNKGASKNNDWSLAFKAS
PGNLTQFEDILFGNTEMSASSGVVGVKLGTDNGQRVVGVGFTDVTQRKFTVSEFSDNDQF
SNLEALIVQLGPKECVLMSGETTGDAGRVRQVLERSGLLITERKRADFSSKDIVQDLNRL
LKVKKGDQPNSSTLNELDKTHGTAALSAVIRYLELLSDEDNFGQYTVGSFELGQYMRLDA
AAVRALNLTPSPNEGGNKNQSVLGLLNKCRTAQGQRLLGQWVKQPLMDVNRIEERLNVVE
AVVEDAELRQTLQEDQLRRIPDFQRLAKKFQRQKASLQDCYRVYQAVDKMPQLLETLERH
SGTHQPLLMELFTNPLKELLMDFSKFQEMVETTLDLQQVEHHEYLIKPDFDENLTALREK
IDDLEGQIKGQMNRVARDLGLEANKTLKLESNSQLGYFFRVTRKDEKSLRNNKNYRTIDT
NKNGVRFHNTAVRQLNEEYLQAKEEYGEQQKSVVTEIINIAAGYVDPMLLINDIIAVLDV
LVSFAHVACSAPIPYVRPTIHAKGGAALRLTEARHPCLEMQDDVSYIPNDVSFVRDKEMF
HIITGPNMGGKSTYIRSIGVIVLMAQLGCFVPCEEAEVSVMDSILARVGAGDSQLKGVST
FMAEMLETASILRSATENSLIIIDELGRGTSTYDGFGLAWAISESIATKIKAFCVFATHF
HELTALADVVPTVTNRHVTALTTNDTLTLLYRVKPGVCDQSFGIHVAELAHFPKHVVEFA
KVKASELEDYQSISLTGTDLDGDSEPAVKKRKCAKQDGEQLIQDFISKVKAIPVSTLSDA
EIVKEVEKLKAVLEAEKNPYITDLLARKQNT
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggctttgctaccgaaacaagaattacagttagacacagcccaggagcaaggcttcctg
tccttctttaggggtttgccagagaaatccagcaccaccttgcgtgtatttgacaggaca
gaatattacactgtccatggccaggatgccctgtttgttgccaaggatgtgtacaagacc
accggggtcgttaagcacctggggacaggatccaacaaggtggagtcagtggtcctcagc
aaaatgaactttgagtcgctggtgcgcgacctgctgcttgtccggcagtaccgagtggag
gtgtactgcaataagggagcctccaagaacaatgactggtcccttgccttcaaggcatct
ccgggtaacctgacacagttcgaggacatcttgtttggcaacacggagatgtcagcctcg
tcaggtgtcgtgggtgtgaagctgggaacagacaatggacagcgggtcgtaggcgtgggc
ttcactgatgtcactcagaggaagttcactgtcagtgagttttccgacaatgaccagttt
tcaaatcttgaggcactgattgttcaactgggcccaaaggagtgtgtgttgatgtcaggg
gagacaactggggatgcaggccgagtgcgccaggtccttgagcgcagcgggctgctcatc
acagagaggaagagagcggacttctctagcaaggacattgtacaggacttgaaccgactc
ctgaaggtcaagaagggagaccaaccgaacagctctactctcaatgagctggacaagact
catggtactgcagccctctctgctgtcatacggtacctcgagctgctgtctgacgaggac
aacttcggccagtacactgtcgggagttttgagttgggtcagtacatgagactggatgca
gcagccgttagggctctcaacctgacgcccagtcccaatgaaggtggcaacaagaaccag
agcgtgctgggtttgctcaacaagtgtcggacagcacagggtcagcgtctcttggggcag
tgggtcaagcagcccctcatggacgtcaacaggatagaagagcgtctcaatgtggtggag
gctgttgttgaggatgcggagctgcgccagacgctgcaggaagatcagctccgtcgcatc
ccggacttccagcgtcttgccaagaagttccaacgccagaaggcatcactacaggactgc
taccgagtgtaccaggcagtggacaagatgccgcagttgctggagacgttggaacggcac
tcaggcactcatcagccactcctcatggagctcttcactaaccccctcaaggagctgctg
atggacttctccaagttccaggagatggtggagaccacgctggacctgcagcaagtggag
catcatgaatacctgatcaagcccgacttcgacgagaacctcacggctctccgcgagaag
atcgatgacttggagggacagatcaagggacagatgaatagggtggcccgagacctgggt
ctggaggctaacaagaccctgaagctggagagcaactcgcagctgggctacttcttccgt
gtgaccaggaaagatgagaagagtttgcgcaacaacaagaactaccgcaccatcgacacc
aacaagaatggtgtacgctttcacaacaccgcagtgcgtcagttgaatgaagaatacttg
caagcaaaggaagaatacggagaacagcagaagagtgttgtcacggagatcatcaacatc
gcagctggctatgtagatcctatgttgctcatcaacgacatcattgccgtgctggacgtc
ctcgtcagcttcgcgcacgtcgcctgcagtgcccctatcccgtacgtccgaccaaccatt
catgcaaaaggtggggctgccctgcggctgacggaggcacgacacccttgtctagagatg
caggatgatgtgtcgtacatccccaacgatgtctccttcgttagagacaaggaaatgttt
cacatcatcacaggtccgaatatggggggcaagtccacgtacatcagatcgattggtgtt
attgtgttgatggcccagctgggctgcttcgtcccctgtgaggaggcggaggtctccgtg
atggacagtatcctggcccgcgtgggggcgggggacagtcagctgaagggcgtgtccacc
ttcatggcggagatgctggagactgcctccatactgaggtcagccacggagaactcgctg
ataatcattgatgaactggggcgtggaacatcgacatatgacggcttcggactggcatgg
gcaatctctgagagtattgctacaaagatcaaggcattctgtgtgtttgcgactcacttc
catgagttgacggcgctggccgatgtcgtccccacggtgaccaaccgtcatgtgactgcc
ctcaccactaacgataccctaacactgctgtacagagtcaagcctggtgtgtgtgaccag
agtttcgggatccacgtggcggagctggctcacttccccaagcatgtcgtcgagtttgcc
aaggtcaaggccagtgaacttgaagactaccagtctatcagcctcaccggtacggacctc
gatggagactcagaaccggccgtcaagaaacgcaagtgtgccaagcaggatggagaacag
ttgatacaggacttcatcagcaaggtcaaggccattcccgtgtcaaccctaagtgacgca
gagatcgtgaaggaggtcgagaaactgaaggcggtgttggaggcggagaaaaacccatac
attacggacctgttggctcggaaacagaatacatag
DBGET
integrated database retrieval system
