Haliotis cracherodii (black abalone): 139475730
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Entry
139475730 CDS
T10814
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
139475730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcra03400
]
139475730
DNA repair and recombination proteins [BR:
hcra03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
139475730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
DUF7792
Motif
Other DBs
NCBI-GeneID:
139475730
NCBI-ProteinID:
XP_071115020
LinkDB
All DBs
Position
Unknown
AA seq
931 aa
AA seq
DB search
MALLPKQELQLDTAQEQGFLSFFRGLPEKSSTTLRVFDRTEYYTVHGQDALFVAKDVYKT
TGVVKHLGTGSNKVESVVLSKMNFESLVRDLLLVRQYRVEVYCNKGASKNNDWSLAFKAS
PGNLTQFEDILFGNTEMSASSGVVGVKLGTDNGQRVVGVGFTDVTQRKFTVSEFSDNDQF
SNLEALIVQLGPKECVLMSGETTGDAGRVRQVLERSGLLITERKRADFSSKDIVQDLNRL
LKVKKGDQPNSSTLNELDKTHGTAALSAVIRYLELLSDEDNFGQYTVGSFELGQYMRLDA
AAVRALNLTPSPNEGGNKNQSVLGLLNKCRTAQGQRLLGQWVKQPLMDVNRIEERLNVVE
AVVEDAELRQTLQEDQLRRIPDFQRLAKKFQRQKASLQDCYRVYQAVDKMPQLLETLERH
SGTHQPLLMELFTNPLKELLMDFSKFQEMVETTLDLQQVEHHEYLIKPDFDENLTALREK
IDDLEGQIKGQMNRVARDLGLEANKTLKLESNSQLGYFFRVTRKDEKSLRNNKNYRTIDT
NKNGVRFHNTAVRQLNEEYLQAKEEYGEQQKSVVTEIINIAAGYVDPMLLINDIIAVLDV
LVSFAHVACSAPIPYVRPTIHAKGGAALRLTEARHPCLEMQDDVSYIPNDVSFVRDKEMF
HIITGPNMGGKSTYIRSIGVIVLMAQLGCFVPCEEAEVSVMDSILARVGAGDSQLKGVST
FMAEMLETASILRSATENSLIIIDELGRGTSTYDGFGLAWAISESIATKIKAFCVFATHF
HELTALADVVPTVTNRHVTALTTNDTLTLLYRVKPGVCDQSFGIHVAELAHFPKHVVEFA
KVKASELEDYQSISLTGTDLDGDSEPAVKKRKCAKQDGEQLIQDFISKVKAIPVSTLSDA
EIVKEVEKLKAVLEAEKNPYITDLLARKQNT
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggctttgctaccgaaacaagaattacagttagacacagcccaggagcaaggcttcctg
tccttctttaggggtttgccagagaaatccagcaccaccttgcgtgtatttgacaggaca
gaatattacactgtccatggccaggatgccctgtttgttgccaaggatgtgtacaagacc
accggggtcgttaagcacctggggacaggatccaacaaggtggagtcagtggtcctcagc
aaaatgaactttgagtcgctggtgcgcgacctgctgcttgtccggcagtaccgagtggag
gtgtactgcaataagggagcctccaagaacaatgactggtcccttgccttcaaggcatct
ccgggtaacctgacacagttcgaggacatcttgtttggcaacacggagatgtcagcctcg
tcaggtgtcgtgggtgtgaagctgggaacagacaatggacagcgggtcgtaggcgtgggc
ttcactgatgtcactcagaggaagttcactgtcagtgagttttccgacaatgaccagttt
tcaaatcttgaggcactgattgttcaactgggcccaaaggagtgtgtgttgatgtcaggg
gagacaactggggatgcaggccgagtgcgccaggtccttgagcgcagcgggctgctcatc
acagagaggaagagagcggacttctctagcaaggacattgtacaggacttgaaccgactc
ctgaaggtcaagaagggagaccaaccgaacagctctactctcaatgagctggacaagact
catggtactgcagccctctctgctgtcatacggtacctcgagctgctgtctgacgaggac
aacttcggccagtacactgtcgggagttttgagttgggtcagtacatgagactggatgca
gcagccgttagggctctcaacctgacgcccagtcccaatgaaggtggcaacaagaaccag
agcgtgctgggtttgctcaacaagtgtcggacagcacagggtcagcgtctcttggggcag
tgggtcaagcagcccctcatggacgtcaacaggatagaagagcgtctcaatgtggtggag
gctgttgttgaggatgcggagctgcgccagacgctgcaggaagatcagctccgtcgcatc
ccggacttccagcgtcttgccaagaagttccaacgccagaaggcatcactacaggactgc
taccgagtgtaccaggcagtggacaagatgccgcagttgctggagacgttggaacggcac
tcaggcactcatcagccactcctcatggagctcttcactaaccccctcaaggagctgctg
atggacttctccaagttccaggagatggtggagaccacgctggacctgcagcaagtggag
catcatgaatacctgatcaagcccgacttcgacgagaacctcacggctctccgcgagaag
atcgatgacttggagggacagatcaagggacagatgaatagggtggcccgagacctgggt
ctggaggctaacaagaccctgaagctggagagcaactcgcagctgggctacttcttccgt
gtgaccaggaaagatgagaagagtttgcgcaacaacaagaactaccgcaccatcgacacc
aacaagaatggtgtacgctttcacaacaccgcagtgcgtcagttgaatgaagaatacttg
caagcaaaggaagaatacggagaacagcagaagagtgttgtcacggagatcatcaacatc
gcagctggctatgtagatcctatgttgctcatcaacgacatcattgccgtgctggacgtc
ctcgtcagcttcgcgcacgtcgcctgcagtgcccctatcccgtacgtccgaccaaccatt
catgcaaaaggtggggctgccctgcggctgacggaggcacgacacccttgtctagagatg
caggatgatgtgtcgtacatccccaacgatgtctccttcgttagagacaaggaaatgttt
cacatcatcacaggtccgaatatggggggcaagtccacgtacatcagatcgattggtgtt
attgtgttgatggcccagctgggctgcttcgtcccctgtgaggaggcggaggtctccgtg
atggacagtatcctggcccgcgtgggggcgggggacagtcagctgaagggcgtgtccacc
ttcatggcggagatgctggagactgcctccatactgaggtcagccacggagaactcgctg
ataatcattgatgaactggggcgtggaacatcgacatatgacggcttcggactggcatgg
gcaatctctgagagtattgctacaaagatcaaggcattctgtgtgtttgcgactcacttc
catgagttgacggcgctggccgatgtcgtccccacggtgaccaaccgtcatgtgactgcc
ctcaccactaacgataccctaacactgctgtacagagtcaagcctggtgtgtgtgaccag
agtttcgggatccacgtggcggagctggctcacttccccaagcatgtcgtcgagtttgcc
aaggtcaaggccagtgaacttgaagactaccagtctatcagcctcaccggtacggacctc
gatggagactcagaaccggccgtcaagaaacgcaagtgtgccaagcaggatggagaacag
ttgatacaggacttcatcagcaaggtcaaggccattcccgtgtcaaccctaagtgacgca
gagatcgtgaaggaggtcgagaaactgaaggcggtgttggaggcggagaaaaacccatac
attacggacctgttggctcggaaacagaatacatag
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