Haliotis cracherodii (black abalone): 139478238
Help
Entry
139478238 CDS
T10814
Name
(RefSeq) nucleoprotein TPR-like isoform X1
KO
K09291
nucleoprotein TPR
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139478238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139478238
NCBI-ProteinID:
XP_071116744
LinkDB
All DBs
Position
Unknown
AA seq
2425 aa
AA seq
DB search
MAGTVFLSKVLDVSELESLSEDIKGKIESSFGNKEAEVDEFKAKYERLRVNSEQQYFELE
KKLINSNSQLETETETRSGLQTRLTDIETKYDEASSKLKTLETSHQSSEATQVHLENVRK
QLEAEKRELNLVLEKRSKEITRLNDELKVFTDKNAALSQEKCEIQAKLGGLQSQEVSREY
REKRLVQEKEHMQKQMDWLNGELKSKTNDLINVKKERASKLLDVQSKLDEKVEELNHLQL
SLDSLKKSKEEQALRIDFLIQKVKDTRDAQTQSDEQFRQEIAAQGKLVQLYKTSSEEGDA
KVTELTRAVEELQKLLKEASDAHSKLEGEQNQIEDGFRDQLKAKDVKTGKLEQELKNANE
LLVAVKAKGAAKLSDEAIEALSPSAAATSKILKSGMTLTQIYNEYVVSSENLELEREENK
RLNQYLDQILQEIEERAPRMKKQREDYEMSLQTISQLTSQLDTAMLESEKLQREGDEYRR
KLGHFQREAQKYQQQTVDLGHQVRYLVKEVEELKGGRVVRDEDVSSAEVSSSSSLISGKL
VTFRSIEEMQNQNQRLLGVVRELSDKREEEEKLATDTKTQELREQLEMTQAELEELRAGK
TRQAEMVESVVRQRDMYRVLLQQGGSMQMPIPPMMASTPLPGGGRDMHTPGRHPPPGMRG
PASGHTPHVGPGSLQQMEKSVSESRTAMKEMQSEFTTYKKERSQNERMISEQLDKARQEL
SEMKVQNAKLASQLDFSAERYKVLQGNIDGYRKEIGALRDKNQQYSTSVVKHEQTINMLR
EDLMSAQENVTRLEVQNDNQRAELNLVKNSEQGLMQELESVRREHMSQNMLLGSLQAIQN
NLERAEYETKTRLNNQISAYEREVNSLKRRMDVQAEEHRSLTRNWESLVKNVQIELEREK
AMAQDNKTKLSDANKNVLDLKQELSATEAKLAAAEGKLTRLGEPRTTERPQMSASSASAA
VVQTDSSEQVKDLRSEVTQLQQQVKSLKNQLETAKKHAQQYKAISDSVEETLKEQNKTSK
EFQQALEQRSQDLKQSKEQLEKRIEAMEKERQELLNENIRISEESHSLNADLRKQLASLQ
NEMQEAVQRREAAIANEEAAKRDYKQQADIAVDSQTKYERELILHAADVEALTTYKKRVE
DFNKTLSVSQEAAKKAEQTLKESQTSWMEQERILREETKLLEKRVQDLTQQNTVLHEQMQ
KLSGQVTAIQKKASVGVAGKSVGVAGKAVGEDVAKSSDQLLEVIRFLRRDKEIAETKLEV
AQAETTRVNQRFSHLEKQLDYANKTLTEERTRSQVSVQTAVQHADLMRKVENMNVLTDSN
KLLREERDKMQQQVTSLEAKIKKMESDIQPLQANLRSVQAQRDTLSAEKTAIQNEVERWK
GRTNHLIEQANKSDPEEHRRIVQERDNLKRQLALVNEERHKHRAEVSKLNANLSTSQTEA
NSVKTQLTQLNGQIVTLKKQNEEKLQDAEEKMKTINQLKKIGRKYKEQAENVGKELEQVQ
KEMAELRAKSANQEAAQPNIAAIEQASAEARQKLASVEKERDELKTQMQQRDTQVGEVKE
QLQKQTQEHSQLQEACNKLKEENSEYEKKQTHSRSVLQTAKNKLTNQREQVERLTSENAE
LKKRISTVETSNKEEQDLRQGMLKSQFEGRISRLEKELQDARGGQGPGLAELQQQLDRVQ
RENTELQAKIAALQKQLESQQKHISQPASIVTRPAATTPPSTSTSDQAPKMANIKPMATG
TTSVGQATPIPHSSAAAKATASIRPMAIAPTSVASTSTATPTATVMPTTLTSQDVDDDLP
STSSSGPAVTPIPSVSVPGRPQQVQIVAPQIEQAQPDMTSDLVEESAPAAAMELMQSQMQ
QQQQQPQQSQVTPVSPHLPSTSSGVVGDGGASQSLGKRQREDTDSQEEAETQAKRTRTQQ
GSPLPTITLTDENAQTVNLESQEVLHLQQTETLEQEEIPPEAAVESVTPQIVGGSQADPA
GLTQLEEVPQQQPPQELFAGPEQTVDAGVEGVHVDEDSGDVIILNSEEEEPCGDEMEDSD
EEEEYEEGEGEYDDDEDEDDDEEAMAEQGDEEEDDDNDVVIIDIDDNEQSMPSQQPPAGP
GPVIQQPIIAQHPVVSPRPTPALQPIVHGERLPSVSIRAHLPPFMLGGQPGPFEEEDCTV
PSTPTLSVPRRADGFAEALNSPQVSQRFVFGAEGSLSQPDLAQLESQRALGMDDTRMDLS
QFDDGGGRSVPTTPLQTSAPVALPEAHVEATQTAPAADVGQSGAEDVDTAQQMQEAAKAE
QDREEIEESALLEGDAPQDSTSGAPDTEDARPETEGEKEVAEEDGSSTSQGAVDLSVGPK
PRIQRIVWEGEGAANAPQPVSSTPQPQPTPPTTQPVRGHPVQRRPGGFQPRPRGPRRGGV
NMRNMRGTGHWRGRPMRGNYRSPQF
NT seq
7278 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtactgtctttctttcaaaagttctggacgtttctgaattagaatcgttatct
gaagatattaaggggaaaattgagagttcgtttggaaacaaagaagctgaagtagacgaa
tttaaggccaaatatgaacgtctccgcgtaaactcggagcaacagtattttgaacttgag
aagaaattgatcaacagcaacagtcaactcgagactgagactgagacaaggagtggtcta
cagacacgcctcactgatatagaaaccaagtatgatgaggcaagttccaaactcaagact
cttgaaacttcccaccagtccagtgaagccacacaggtgcaccttgagaatgtgcggaag
cagctggaggcggagaaaagagagctgaacctggtgctggagaaacgaagcaaggagatc
accagactcaacgatgaattgaaagttttcactgacaagaacgctgctttaagccaggag
aagtgtgagatccaggccaagcttggggggcttcagtcacaagaagtgtcccgagagtac
cgtgagaagcgacttgttcaagagaaggagcacatgcagaagcagatggactggctgaat
ggggagctgaagagcaagacgaatgacctgatcaatgtcaagaaggagagggccagcaag
ctcctggacgtgcagtcgaagctggacgagaaagtggaggagctgaatcacttgcagcta
tcccttgattctctgaagaagtccaaggaggaacaggcactgagaattgatttcctcatt
cagaaagtcaaggatacccgtgacgctcagacccaatcagacgaacagttccgccaggag
atagctgctcaggggaaactggtgcagttgtacaagacgtcgtccgaggagggtgatgcg
aaagtgacggagttgacgcgggcggtggaggagctgcagaagctcctgaaggaagcctcc
gatgcccattccaagctggagggagagcagaatcagattgaagatggcttcagggatcag
ttgaaagctaaagatgtgaagacagggaaactggagcaagagctgaagaacgccaatgag
ctgcttgtcgccgtgaaagccaaaggtgctgccaaactcagcgatgaagcgatagaagcc
ttgtcaccatccgcagctgcaacatccaaaatactcaagtcgggcatgaccctcacacag
atttacaatgagtatgtggtctcttctgagaatctggaactggagcgagaagaaaacaaa
cgtctcaaccagtaccttgaccagatcctacaggaaatcgaagagcgtgcaccgcgtatg
aagaaacagcgtgaggactacgagatgtcactgcaaactattagtcagctgacgtcacag
ctcgacacagccatgctggaatctgaaaagttgcagcgtgagggtgacgagtaccggcgg
aagttgggccacttccagagagaggctcagaaatatcaacaacagacagtggatcttggg
caccaggtgcggtacttggtgaaggaggttgaggagctgaagggaggtagagtggttcgg
gacgaagatgtgtcatcagcggaggtgtcaagttcatcctctctcatctcaggcaaactt
gtcacatttaggagcattgaagaaatgcagaatcagaaccagagactcctgggggtggtg
cgagaactcagtgacaagcgggaggaggaggagaagctggctacagatacgaagacccag
gagcttcgtgagcagctcgagatgactcaggccgagttggaggagttgagagctggcaag
acacgtcaggccgagatggtggagtctgttgtgcgccagagagacatgtacagggtcctg
cttcaacaaggagggtccatgcagatgcctatccctcccatgatggcttccacacccctc
cctggtgggggcagggacatgcacacccccggtcgacacccacccccagggatgagaggc
cctgcgtcaggacacacaccccatgtgggaccaggctctctgcagcagatggagaagtcg
gtgtcggagtccaggacagccatgaaggaaatgcagtcggagttcaccacttataagaag
gaaagatcacaaaatgaaaggatgatcagcgagcagctggacaaggccagacaggaactc
tccgagatgaaggtgcaaaatgccaagctggcttcacagcttgacttctctgctgagaga
tacaaggtccttcaaggcaacatcgacggctacaggaaggagatcggagcgttgcgggac
aagaatcaacagtactcaacatctgttgtgaaacacgaacagacaatcaacatgctgaga
gaggacttgatgtctgcccaagagaacgtgacaagactagaagtccagaatgataaccaa
cgtgctgagttaaacctggtgaagaactcggagcagggattgatgcaggagctagagagt
gtccggcgggagcacatgtctcagaacatgctcctcggcagtctgcaggccatacagaac
aatcttgagcgtgcagagtatgaaaccaaaactcggctgaacaaccagatcagtgcgtac
gagcgggaagtgaactcgttgaagcggaggatggacgtgcaggccgaagaacaccggtcg
ctgacccgcaactgggagagcctggtgaagaatgtgcagatagaactggagcgtgagaaa
gcaatggcccaggacaacaagaccaagttgtccgacgccaacaagaacgtgctggacctc
aagcaggagctctctgcaacagaagcgaaactggctgcggctgagggcaaactgacccga
ctcggagaacccagaactactgaacgtccgcagatgtcagcatcttctgcgtctgctgct
gtggtgcagacagattcttctgaacaggtcaaggacctgaggtcagaggtcacccaactc
cagcaacaggttaaatctttgaagaaccagctggagacggcaaagaagcacgcccagcag
tacaaggccatctcggacagcgtggaggaaacactgaaggagcagaacaagacaagcaag
gagttccagcaagccctggaacagagaagccaggacttgaaacaatccaaggagcagctg
gagaagaggattgaagcaatggagaaggagagacaagagctgctcaacgagaacatccgc
atctcggaggagagccattcgctgaatgccgacctgaggaagcagttggcaagtctccag
aatgagatgcaggaagccgtacagagacgtgaggctgccatcgctaatgaggaggccgcc
aagcgggactacaaacagcaggcagacattgccgtggattcacagaccaagtacgagagg
gagctgatcctccatgctgctgatgtggaggccctgacgacctacaagaaacgggtggaa
gatttcaacaagacgctgtcagtctcacaggaggcggccaagaaggctgagcagaccctc
aaggagtcccagacgtcatggatggagcaggagcggatcctgcgggaggagaccaagctg
ctggagaagagggtgcaggacctcacccagcagaacacggtgctgcacgaacagatgcag
aagctgagcggccaggtgacagcaatacagaagaaggcatcagtgggcgtggctgggaaa
tcagtgggcgtggctgggaaggctgtgggtgaggacgtggccaagtcctcagatcagctg
cttgaagtcatcagattcctgcggagagacaaggagatcgcagagacgaaactggaggtg
gcccaggctgagacaacacgggtgaatcagagattctctcacctggagaaacagctggac
tacgccaacaagacgctcacggaggagaggacacgatctcaggtgtctgtccaaactgct
gtccagcatgcggacttgatgaggaaggtggagaacatgaacgttttgacagacagcaac
aagctgctgagagaggagagagacaagatgcagcagcaggtcacaagtctcgaggccaag
atcaagaagatggagagtgacatccagcccctgcaggccaacctccgcagtgtgcaggcc
cagcgggatacactcagtgctgagaagacggccatacagaacgaggtggagcggtggaag
ggacggaccaatcacctcatcgagcaggccaacaagtccgacccagaggaacatcgcagg
atagtgcaggagagggacaatctgaagcgacagctggccctggtgaacgaggagcgacac
aaacacagggcggaggtgtctaaattgaatgccaacttgtcgactagtcagacggaggca
aacagtgtcaaaacacagctgactcaactgaatggccagattgttaccttgaagaaacag
aacgaggagaaattgcaggatgctgaagagaaaatgaagacaatcaaccagctgaagaag
atcggacgcaagtataaggagcaggctgagaacgttggtaaggagctggagcaggtccag
aaggagatggccgagctccgcgccaagtccgccaaccaggaagcagcccagcccaacatt
gcagccatagaacaggcgtctgcagaggcgcgtcagaagctggccagtgtggagaaggag
cgagacgagctgaagacgcagatgcagcagagggacacccaagttggtgaagtgaaggaa
cagctgcagaaacaaacacaggagcacagccagctacaggaggcctgcaacaagctgaag
gaggagaactcggagtacgagaagaagcagacgcactcacgatccgtgctgcagaccgcc
aagaacaaactgaccaatcagagagagcaagtggagagactgaccagtgagaatgctgaa
ctgaaaaagaggatatccacagtggagacaagtaataaagaagaacaggacctgcgtcag
ggcatgctgaagtctcagttcgagggccggatcagccggctggagaaggagctgcaggac
gcccgggggggccagggcccggggctggccgagctgcagcaacagctggaccgagtccag
agggagaacacagaactgcaggccaagattgctgctctacagaaacagctcgagtcccag
cagaaacacatcagccagcctgcctccatcgtcacgcgaccggctgctaccaccccgccc
agcacatccacgtcggaccaggctcccaagatggccaacatcaagccaatggctacaggc
accacaagcgtgggccaggccacgcccatcccccatagctcggctgcagctaaagccacg
gctagcatccgacccatggccattgcacccacatcagtagcctcaacgtccactgcaaca
cccacggcgacggtcatgcctacaacactgacatcacaagatgtggacgatgacctcccg
tctacatcgtcctccggcccggcggtcacgcccatcccgtccgtcagtgtcccgggacga
ccccagcaggtccagatcgtcgcaccacagattgagcaggcacagccagacatgacctcg
gacctggtggaggagtcagcccctgctgcagctatggagttgatgcagtcacagatgcag
cagcagcagcagcagccgcagcagtcacaggtgacgccagtgtccccccacctgccgtcc
acatcatcaggtgtggtgggcgacggtggagccagtcagtcgctgggcaagaggcagagg
gaggacacagacagtcaggaggaggcagaaacgcaggccaagagaacaagaacacagcaa
ggttcccctctcccaaccatcactctcactgatgagaacgcccagacggtcaacctggag
tcacaggaagtccttcacctccaacaaacagagaccttggaacaagaggagataccccct
gaagctgcagttgaaagcgtgaccccccagatagtgggaggttctcaggcagaccccgcc
ggcctcactcagctggaggaggtccctcagcagcagcccccacaggagctgtttgcagga
cccgaacagacggtcgacgctggggtggagggagtgcatgtcgacgaagacagcggggac
gtgatcatcctgaacagtgaggaggaggagccttgtggagatgagatggaggactcggac
gaagaggaggagtatgaggaaggagaaggtgaatatgatgatgatgaagacgaagatgat
gatgaagaggccatggctgaacagggagatgaggaggaagatgatgacaatgatgttgtt
atcattgatattgatgacaacgagcaatccatgccttcccagcagccccctgccggcccg
ggacctgtgattcagcaaccaatcatagcacagcatcctgtagtaagtccacgcccaacc
cctgcccttcagccaatcgtgcatggcgagcgattgccatctgtcagcatcagggcccat
cttccgccattcatgttagggggtcagccaggaccattcgaggaggaggactgtaccgtg
cccagcacgcccacactctccgtgccgcgacgtgcagacggcttcgcagaggccttgaat
tccccacaggtgtcacagaggtttgtgttcggtgcggaaggtagtttgagccagccggat
cttgcccagctggagtcacagcgagcattaggtatggacgacacccggatggatctgtcg
caatttgatgatggcggaggccgtagtgtcccaacaacgccgttacagacatcggcccca
gttgccctccctgaggcccatgtagaggcaacgcagactgcacctgccgccgatgttggg
cagtctggagcagaagacgtcgacacagcgcagcagatgcaagaggccgccaaagcagag
caggaccgtgaggagattgaggaatcggccttgttggagggagacgccccccaggactcc
acgtccggtgcacctgatacagaagatgccaggcccgagaccgagggagagaaggaagta
gcagaggaagatgggagttcaacatcgcagggagcagtcgacctttcagtcggtccgaag
ccccggattcagcgtatagtgtgggagggcgagggtgcagccaacgctccccagccggtc
agctccaccccccagcctcagccaacaccacccacaacccagcctgtacgtggacaccct
gttcagcgccgacctggggggttccaaccccggcctcggggcccccggaggggtggagtc
aacatgaggaacatgcgggggacaggacactggcggggtcgaccaatgagaggcaactac
aggtccccacagttctag
DBGET
integrated database retrieval system
