Haliotis cracherodii (black abalone): 139479875
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Entry
139479875 CDS
T10814
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
hcra03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139479875
Chromosome and associated proteins [BR:
hcra03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
139479875
Chromatin remodeling factors
BAF complex
139479875
PBAF complex
139479875
GBAF(ncBAF) complex
139479875
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139479875
NCBI-ProteinID:
XP_071118878
LinkDB
All DBs
Position
Unknown
AA seq
1744 aa
AA seq
DB search
MATGDDSNMMNTPPPGPSPSYPQDNVQMLQKVTMAISQMEEKGMQGDPRYDQLMVMANRA
KNMPGGPGPHVMQGGPGGPGMAGTPPHGMNMGPQSQGMQGPMPGMHQGPQGMGGPPGMSG
GPMPGMGGPQPGMTASQQGMGGSQSGMGGPGGPQQGMGGGQNINGGSQQGMNGGPQQGMP
GGPQQGMPGPPGMQGPGGMPHGGMGGPGPNMPGNMASQNMGGPNDGPMAAPGMNMPPNMN
NPNVPTSSTSMSQPSSNMGGPSVPNTSGSGGAMNTTMAGPGMNSGPGPMGPVSGNMGMGP
NMPPHNMEGNQGQGKIQGSAPQGMPPGQMPPGGPRPTAFSSAQLHQLRAQIMAYKLLARN
QIIPDTLRLAVEGKRPLGPFPRPADPHQMQQMRMQHQQQQQQQQQQQQQQSQQSSDPSQQ
PQQMQMRTMSSTAQPNGAPPPTSTPDSGASTPRPTQPSQPPPPSVQAMMALQQKQNRIAP
VAKPQGLDPIEMLSERENRLAARIGSRIQELSKMPATMPEDMRCKAMIELRALRLLNFQR
QLRTDVVSCMRRDTTLETALNTKAYKRSKRQSLREARITEKLEKQQKVEQERKKRQKHQE
YLNAVLQHAKDFKEFHRNVTAKISKLNKAVMTYHANTEREQKKEQERIEKERMRRLMAED
EEGYRKLIDQKKDKRLAYLLHQTDEYIDNLMKLVHEHKEDIRKKKRHRIKKKKRPKTPKE
GQSGDALKEGGLDESSNMSEIHATVKETATGKLLTGEDAPTAGQLDAWLELHPGYEVVPT
EGGEDDENSDEEESDEESEADEPLPPPSILTENRPGTIATSPENLDEETANQIIQQASTK
DEDDEYKNLENYYGVAHTVREKVFEQASILVNGTLKEYQVKGLEWLVSLYNNHLNGILAD
EMGLGKTIQTIGLITYLMERKRVNGPFLIIVPLSTLSNWIIEFEKWAPSVIKIPYKGSPL
VRRNIAPQLKGGKFNVLLTTYEYIIKDKAILSKLRWRYMIIDEGHRMKNHHCKLTQVLNT
HYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCATFEQWFNAPFAMTGEKVELNQE
ETLLIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCEMSALQRFLYRHMQHKGVLLT
DGSEKDKKGKGGAKLLMNTIMQLRKICNHPFMFPHIEEAFAETAGSQGGIVTGPDLYRSS
GKFELLDRMLPKLKLRNHRVLLFCQMTSLMSIMEDYFVYRGFRYLRLDGTTKSEDRGHLL
HLFNQQDSPYFVFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKAEV
RVLRLMSVNSVEERILAAARYKLNVDEKVIQAGMFDQKSTGFERKQFLNEILMNEQNGEE
EEDEVPDDETINQMLARSEDEFEVYQKMDIERRRNEARDGGKRKPRLMEIDELPSWITKD
EEEVDRLTCEEEEDKLFGRGSRQRKEVDYSDQLTEKQWLRAIEDGNLDEVEDKKRVTKKG
RKRKPVDDDMEQTPKIKKRRGRPPVEKMTPNPPKLTKRMKKILDVVINYKDSDGRVLSSM
FMQLPSKKELPEYYEIIRKAVDFRKIKQRIVDHKYRSIDDLENDVMLLCKNAQAYNVEGS
VIYEDSIVLQSVFTSARERLEKEGMVSSDESGASEEEEDIDDKDDQDDDADDDDSQHVKK
HKLSKESKKTPSSSKQRGPKPRKAKAKPIISDDESEDSDSDDEEVMPSRSSTRTSSPSPG
HRKR
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atggcaactggggacgacagcaacatgatgaatacaccacccccagggcctagcccatct
taccctcaagacaatgtccagatgttacagaaggtaaccatggctatcagccagatggaa
gagaaaggaatgcaaggagacccaagatatgatcaactgatggtcatggctaacagagcc
aaaaacatgccaggcgggcctggaccacatgttatgcaagggggaccaggtgggcctgga
atggctggcacccctcctcatggaatgaacatgggaccacagtcacaaggaatgcaaggg
cctatgccaggaatgcaccaaggtccacagggaatgggaggaccaccagggatgtcaggt
ggtccaatgccaggaatgggtggcccacaaccaggaatgactgcttctcaacaagggatg
ggaggatctcaatctgggatgggtgggcctggtggcccacagcaaggaatgggtggaggg
cagaacataaatggaggatctcaacaaggcatgaatgggggcccacagcaaggtatgcca
ggaggtccccaacagggtatgcctggtcctccaggtatgcaaggacctggaggcatgcct
cacggaggaatgggtggtcctggtcccaacatgccgggcaatatggcctcacaaaacatg
ggaggacccaacgacgggccaatggcggcaccaggcatgaacatgcctcccaacatgaac
aatcccaacgtgccaacaagtagtacatcgatgtcacaaccatcatccaacatgggcggc
ccctcagtacccaatactagcggtagtggtggagctatgaacacaaccatggctggccct
ggtatgaactctggacctgggcctatgggacctgtttcagggaacatggggatgggacca
aacatgccaccgcacaacatggaggggaatcaagggcaaggtaagatccaaggaagtgcc
cctcaaggaatgccccctggtcagatgccccccggaggaccccgcccaactgccttcagc
tccgcacagctccatcagttgcgagcacagatcatggcctacaagttactagctcgcaac
cagatcatcccggacacactccggttagctgtggagggtaagaggccactgggaccattt
cctagaccagcagatcctcaccagatgcagcagatgaggatgcagcatcagcagcagcag
cagcaacaacaacaacagcagcagcagcagtcacaacagtcatctgatccatcacagcag
ccacaacaaatgcagatgaggacaatgtcaagcactgcccagcctaatggagcaccgccc
ccaacatcaacacctgatagtggcgcttcaacacccagacccacccagcctagtcagccc
ccaccaccttcagtgcaagccatgatggcccttcaacagaagcagaaccgtattgcacct
gtagctaaaccacagggactggatcctattgagatgttgagtgagagagaaaacagactt
gctgctcgtatcgggtctcggatccaggaactcagcaagatgcctgccaccatgcctgaa
gacatgagatgcaaggccatgatagagctccgggctctcagactgctcaacttccaaaga
cagctgagaactgatgttgtgtcatgcatgagacgtgacaccactctagagacggctctc
aacaccaaggcgtacaagcgcagcaagcgacagtcactgagagaagcccgtatcactgag
aagcttgagaaacaacagaaggtggaacaggagaggaagaagaggcagaaacatcaggaa
tatctgaatgctgtgctacaacatgccaaggacttcaaggagttccacaggaatgtgacg
gccaagatcagcaagttgaacaaggctgtgatgacgtaccatgcaaacaccgagcgggag
cagaagaaggagcaggagagaatagagaaagagcgtatgagacgtctcatggcggaagat
gaagaaggttaccgtaagctgattgatcagaagaaagacaagcgcttggcctaccttctc
caccagactgacgagtacatcgacaatctaatgaagttggtccacgaacacaaggaagat
atccgcaagaagaagaggcacaggattaagaagaagaagaggcccaagacacccaaggaa
gggcagagtggcgatgcccttaaggaagggggcctggacgagagctccaacatgagtgaa
atacacgcaaccgtcaaggagacggctactgggaaactgttgaccggggaggatgctccc
actgctggtcaacttgacgcttggctagaactgcaccctggttatgaggtggtgccgaca
gaagggggagaagatgatgaaaattcagatgaagaagagtcagatgaggagtctgaagct
gacgagccactgccgccaccttcgatattgactgagaatagacctgggactatagccaca
agcccagaaaacctagatgaggagactgccaaccagattatacaacaagcatctactaag
gatgaggatgatgagtacaagaatcttgaaaactactatggtgttgctcacaccgtcaga
gagaaggtgttcgaacaagcgtccatcttggtcaatggaacactgaaggagtaccaggtg
aagggtctagaatggctcgtctccctgtacaacaatcacctgaatggtattcttgctgat
gagatgggtctaggaaagaccattcagaccattggtcttatcacatacctcatggaaaga
aagagagttaacggaccattcctcatcattgtaccattgtcaactttgtccaactggatc
atagagttcgagaagtgggccccctctgttatcaagatcccatacaaaggatcaccactg
gtcaggagaaacattgccccacaattgaagggaggcaagtttaatgtgctcctaacaaca
tatgagtacatcatcaaggacaaggccattctgtccaagttgcgctggaggtacatgatc
atcgatgaaggtcatcgtatgaagaaccaccactgtaagctgacccaggtcctgaacacc
cactacatcgctccccacagactgctgctcacagggaccccgctccagaacaaattgcca
gagttgtgggcccttctgaacttcctcttgccatccatcttcaaatcctgtgccacattt
gagcagtggttcaacgctcctttcgccatgacaggagagaaggttgagttgaatcaggaa
gagacactgctcatcatccgacgtctccacaaggtgcttcgacccttcctactgagacgg
ctgaagaaggaggtggagtctcagctacctgagaaggttgagtatgtgatcaagtgtgag
atgtcggctctacagcgcttcctgtaccgacacatgcaacacaagggtgtcctgctcaca
gatggatcggagaaggacaagaagggcaagggaggagccaagcttctgatgaacaccatc
atgcagctgagaaagatctgtaaccatccattcatgtttcctcacattgaggaggccttc
gcagagacagcaggatcacagggcggaattgtcactggccctgatctgtacagatcttct
ggaaaatttgagttgctggacagaatgttgccaaaactgaagttacgtaaccaccgagtc
ttgctgttctgtcagatgacatctctgatgagcatcatggaggactattttgtatacaga
ggtttccggtacctgcgtcttgatggaacaaccaagtctgaggatcgaggtcacctccta
cacctgttcaaccaacaggactccccctacttcgtgttcctgctgagtaccagggctgga
ggtctcggtctcaaccttcaggctgccgacacagtcatcatcttcgactccgactggaac
cctcatcaggacttgcaagcccaggatcgagctcatcgtatcggtcagaaggcagaggtg
cgtgtcctgcgtctcatgtcagtcaacagcgtggaggagcgcatcctagctgcagcccgc
tacaagctgaacgtggatgagaaggtcatccaggctggcatgttcgaccagaagtccact
ggctttgagaggaaacagttcctgaacgagattctcatgaatgaacaaaatggagaagag
gaagaagatgaggttcctgatgatgagaccatcaaccagatgttggccagaagcgaggat
gagtttgaggtctatcagaaaatggacattgagcgacgtcgtaacgaggccagagatgga
gggaagaggaagccacgactgatggaaattgatgaactgccatcttggattaccaaggat
gaggaagaggttgaccgactgacgtgcgaggaggaggaagacaagctgttcggccgtggg
tctcgccagaggaaggaggtcgactattcagatcagctcacagagaagcagtggcttcgg
gctattgaagatgggaacctggatgaagtggaagacaagaagcgagtcaccaagaaaggt
cgtaagaggaaaccagtggatgatgatatggagcaaacgccaaaaattaagaagaggcga
ggtcgacctccagtagagaaaatgaccccaaacccaccaaaactgacaaagaggatgaag
aaaatacttgatgttgtgataaactacaaggacagtgatggccgagtattgagcagtatg
ttcatgcagctgccatcaaagaaggagctccctgaatactacgaaattatcaggaaagct
gtcgattttagaaagattaagcaacgcatcgtcgaccacaagtaccgcagtatagatgac
ttagaaaatgatgtcatgttgttgtgtaaaaatgcccaggcttacaatgtggaaggatca
gtgatctatgaggactccatcgtgctacagtcagtatttacaagtgctagagagaggttg
gagaaggagggcatggtgtcctccgacgagagcggagcaagtgaggaggaggaggacatc
gatgacaaagacgaccaagacgatgacgctgatgacgatgacagtcagcatgtgaagaaa
cataaattgtccaaagaaagcaaaaagactccatcaagtagcaagcaacgagggcccaaa
ccgaggaaggcaaaggctaagcccatcatcagtgatgatgaatcggaagatagtgactct
gatgatgaagaggtgatgccatcacgcagctcaacgcggacatcgtccccgagtccagga
catcggaaacgatga
DBGET
integrated database retrieval system
