Haliotis cracherodii (black abalone): 139480139
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Entry
139480139 CDS
T10814
Name
(RefSeq) general transcription factor IIF subunit 1-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139480139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcra03021
]
139480139
Transcription machinery [BR:
hcra03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
139480139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
139480139
NCBI-ProteinID:
XP_071119271
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MSASMSTPQTSTSDVQEHVVRVPRERKKKYSMMKIGSGVDLDFVKLQQAQTSVRIERENN
FKEFKSAYDIDTMPKFGAGSEFGREQKEEARRKKYGIRVKKYNPEDQPWMLKIGQGKNMK
KYKGVREGTIADNTSYYIFTKCPDGAFEAVPVEEWNNYTPQIRYKYLNSEEAEEEFSRRD
KTLNYFHIMVKKRLRNDVVDMDEEASEKVPKGSKRKGKEFKLTDQDDWAELSDDDEEEDE
DGEDGDAAKKKPKKGKGKSDPKRKKNSKHNSDDEAIEESDEGDFDDREVDYMSDSGSESE
VEDKEKADKYEEKGVDEEAGLRKLIDSGEEDEDEDENKEEENDDEKEKDSKGKKTGTDSD
SSSSSSDSDSDIEKDDKLSSALFMQKGSEKKKGDKTASPKPDERGVKRKMDGESSSMKKS
RTDSPLTTQGSGGSSEGITEDAIRRYLMRKPMTTKDLLQKFRSKKLNMTNEQMTHTIAQL
LKKINPDKKIINKVMYLSLKSD
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgtctatgtctacaccccagacctcaacctctgatgtccaggaacatgttgtc
agagtaccaagagaaagaaaaaagaagtacagcatgatgaagatcggaagtggtgtggac
cttgactttgtgaaacttcagcaggcacagacttcagtgaggatagagagagaaaacaac
ttcaaggaatttaagagtgcttatgacattgacaccatgcccaagtttggcgctgggagt
gagtttggtcgggaacagaaggaggaagcacggaggaagaagtatgggatcagagtgaag
aagtataacccggaggaccagccatggatgctgaagataggccagggaaaaaatatgaag
aaatacaagggtgtgcgtgagggaacgattgctgacaacacatcgtactacatcttcaca
aagtgtcctgacggagcgtttgaggcagtgccggtcgaggagtggaacaattacaccccg
cagatcagatacaagtacctcaactctgaggaggcagaggaagagtttagtcggagagac
aaaactctgaactacttccacatcatggtgaagaagcgcttacgcaatgacgtagtggat
atggacgaggaagcttctgagaaggtgcccaagggtagcaagcggaaagggaaggagttt
aaactgacggatcaggatgactgggctgaattgtctgacgatgatgaagaggaagatgag
gatggagaggatggtgatgctgcaaagaagaaacctaagaaaggcaagggaaagtctgac
ccaaagaggaaaaaaaattcaaaacacaattctgatgatgaggctatcgaggagagtgac
gaaggggactttgatgacagggaggtggattacatgagcgactcaggcagtgagtctgag
gtggaagacaaggagaaggcagataagtatgaagagaagggagtggatgaggaggctggg
ctgagaaaacttattgactcgggcgaggaagatgaagacgaagatgagaacaaggaagaa
gagaatgatgatgagaaggagaaagatagcaagggcaaaaagactggtactgacagcgac
agtagcagctccagctctgacagcgactcagatatagagaaggacgacaagctctcctca
gctctgttcatgcagaaaggctcggagaagaaaaaaggtgataaaacagcatctccaaaa
cctgatgaaagaggagtgaagaggaagatggatggagagtcatcatccatgaagaagtcc
cggacagacagtcctctcacgacacagggcagtggaggatctagcgagggtataacagaa
gatgccattcgtcggtacctcatgcggaaaccaatgacaacaaaagatttactgcagaag
ttccgatctaagaaactgaacatgacaaatgaacagatgactcacactattgcccagttg
ctaaaaaaaatcaacccggacaagaaaattatcaacaaagtcatgtatctctctttaaaa
tctgactga
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