Haliotis cracherodii (black abalone): 139480583
Help
Entry
139480583 CDS
T10814
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
hcra Haliotis cracherodii (black abalone)
Pathway
hcra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hcra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139480583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcra03019
]
139480583
Messenger RNA biogenesis [BR:
hcra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139480583
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
Motif
Other DBs
NCBI-GeneID:
139480583
NCBI-ProteinID:
XP_071119825
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MSRHRAVRGMNLDDEYDDDDEYYGQSVEDNFCISPGTAAQFTFNRGQTTFATYMGGDDEV
EVVESDDDTGHQGASSGQTDKKLNDVDRAKLNSCLEEVHNILGESRPDSVYKEIIIKHKF
NLQASLDELLSKKEAPKPQRAPRQNRRNKSQGITSTDVPILKDPPSFFKSQNSIGSATNS
ISKVTVTPKKEPVRGFEPVVATSTKSDDRLAPQVATSCDNVTGGQGGAAASTSETMSVES
STSLASSSTSSLPTPKKDPAYRPPLPKSSSKSKQKINVQEEYSKRQGDLELLNLVVIGHV
DAGKSTLMGHLLYQLGSVHRKVMHKYEQESKKLGKGSFAFAWVLDETEEERTRGVTMDVA
QTKFQTPKKTVTLLDAPGHKDFIPNMITGAAQADVAILVINATKGEFETGFETGGQTREH
ALLARSLGVAQIIVAVNKMDTVDWSEERYNEVVKKIGQFLKQAGFREGDVSFVPCSGLGG
ENLTKTVREPKLSAWYRGPTLSEQIDKFKSLERPIDKPFRLNVGDVFKGQGTGFRISGRI
GSGYTQPGDRAVVMPGNITATVRNVFIDEMPVQVAFAGDHVTILISGIDIANVNIGSVLC
DPANPAKFSTRIRAKIVIFSLEVPITRGYPVVFHYQSVNEPAVIRRLVAQLNKSTGEVVK
KKPRCLVKNTSAVVEIELERNICLEEYKDFKDLGRFMLRSGGATIAAGLVEEILPPKMKE
DQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccacagggctgtgcgtggcatgaacctagatgatgagtacgatgatgatgac
gagtactatggccagtctgtggaggacaacttctgtatctccccagggacagctgctcag
ttcacattcaaccgcggccagaccacgtttgccacgtacatgggcggagatgatgaggtg
gaggtggtggagagtgatgacgacactggccaccagggggcgtcatcaggacagacagac
aagaaactgaatgatgttgatcgagctaaactaaacagctgtttggaggaggtccataac
atacttggggagtctcgccctgactcagtgtacaaggagatcatcatcaaacacaagttc
aacctgcaggcttccctggatgagctgctgtcaaagaaagaagcacccaagcctcagaga
gcaccacgacaaaatcgacggaacaaatctcaaggcatcacaagtacagacgtacccatc
ctgaaagatccaccatcatttttcaaatcccagaattccattggaagtgcaaccaattca
atttcgaaggtaactgtcactcccaagaaggaacctgttagaggttttgaacctgtggtt
gccacgtcaaccaagagtgatgacagacttgccccccaggtggccacaagctgtgataat
gtgactggtggccaaggcggggccgcggcgagtacgtctgagacgatgtcggtagaatca
tccacgtcgctggcgtctagttctacctccagtcttcctacacctaagaaagacccagcg
tatcggccgcctttaccgaagtcatcgtctaagagtaaacaaaaaataaatgtacaggaa
gaatattccaaacgtcaaggtgacctggagctgttgaacctggtagtgataggtcatgtg
gatgcgggcaagagtacgctgatggggcacctgctgtaccagctgggttccgtccacagg
aaggtcatgcataaatatgagcaggagtccaagaagcttggcaaggggtcgtttgccttc
gcgtgggtgcttgacgagacggaagaggagaggactcgtggggttaccatggatgtggcc
cagacgaagtttcagacaccgaagaagactgtgactctccttgacgctccaggccacaaa
gatttcattcccaatatgatcaccggagctgcccaagcggatgttgctattttagtcatc
aacgccacaaagggggagttcgagactggctttgagaccgggggtcaaacccgtgaacat
gctttactagccagatcactgggtgttgctcaaataatagtggctgtcaacaagatggac
acagtcgattggtcggaggagaggtataatgaggtggtgaagaaaatcggtcagttcctc
aagcaggctggcttccgggaaggggacgtgtcgtttgtgccgtgcagtggtcttggcggt
gagaatctcaccaagacagtgagagagcccaagctgtctgcctggtacagggggccgacg
ctatccgagcagattgataagtttaagtcactggagcgaccaatagacaaaccgttccgt
ctgaatgtgggggacgtgttcaaagggcagggcaccggcttcaggatttcgggaagaata
ggctcgggctacacccagccgggtgatagagcagtcgtcatgcccggcaacatcaccgcc
accgtcagaaatgtgtttatagatgagatgccagttcaggtggcatttgctggtgaccat
gtgacaatcttgatcagtggaatagacatagccaatgtaaatatagggagtgtgttgtgt
gatcctgccaacccggccaagttttcgactcgaatccgtgccaagatcgttatcttcagc
ctggaggtgcccatcacacgggggtacccggtggtgttccactaccagtctgtcaatgag
cctgctgtgataagacgcctcgtggctcagctcaacaagagtaccggcgaggtggtgaag
aagaagccaagatgcctggtgaagaacaccagtgcagtggtggaaatcgaactggagagg
aacatatgtctggaggaatacaaagacttcaaggacttggggaggttcatgttgaggtca
ggcggagcaaccatcgctgctggcttggtggaggagattttgcctccaaagatgaaagaa
gatcagtga
DBGET
integrated database retrieval system
