Halomonas campaniensis: FF32_00205
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Entry
FF32_00205 CDS
T03198
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
hcs
Halomonas campaniensis
Brite
KEGG Orthology (KO) [BR:
hcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcs03400
]
FF32_00205
Enzymes [BR:
hcs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
FF32_00205
DNA repair and recombination proteins [BR:
hcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
FF32_00205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
LytR_C
Motif
Other DBs
NCBI-ProteinID:
AIA73314
LinkDB
All DBs
Position
50320..51900
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AA seq
526 aa
AA seq
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MSKPLLLVLGDQLSLSLATLRNAPTDAVIALCEVAEEARYVPHHIHKVGLFMAAMRHFAQ
ALRDKGYNVHYSRIDDADNTQSLITEAERIATQYGCHEVRVARPGEWRLWDAMQQRQAAA
LPWKVIEDDRFFSSPDDFANWAKGRKQLRLEYFYREQRKRTGLLMEGDTPAGGKWNFDHD
NREPIQATLSFPSPPTHRQDALTQEALNDAKQHFSEHMGSLDNFNLPVTRRQALVDLNHF
LDHGLADFGRYQDAISDKEPFLFHSRLSAALNIGLLTPHEVCEAAEQRYLTGHAPINAVE
GFIRQILGWREYVRGLYWTQMPTYKRENRLGFERELPAFYWDGNTDMRCLQRAIQMTIDN
SYAHHIQRLMVTGNFALLCGVKPEALCDWYLAVYADACEWVELPNTLGMVLHADGGLMGS
KPYCASGKYIDKMSDHCQHCRYSPKQVTGPKACPFNSLYWHFLETNAEQLNRNPRMKLIY
GSLSRMKDEKRDAMRQQAEQFLASLPTSPGYGQTSHTQGYLSKGTQ
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcctttactgttagtccttggtgatcagctttcgctttcattggcaaccctg
cgcaatgcgccaactgacgcagtcatcgctctttgcgaggtcgccgaagaagcgcgctat
gtgcctcaccatatacataaagtcggcttgtttatggccgccatgcggcactttgctcaa
gcgctgcgcgataaaggctacaacgttcactacagccgcattgatgatgctgacaatacc
cagtcactcatcacggaagctgaacgtattgccactcagtacggttgccatgaagtgcgt
gtagcaagacctggtgaatggcgactttgggatgccatgcaacagcgccaagcagccgcc
ctaccctggaaagtgatcgaagatgatcgctttttcagctcgcctgatgactttgccaac
tgggctaaaggacgtaaacagctgcgtctggagtatttctatcgggagcagcgcaaacga
actgggctactgatggagggcgatacacctgctggaggaaaatggaactttgatcacgac
aaccgtgagccgattcaagcaacgctcagctttccatcgcctcccacccatcgccaagat
gcactgacccaggaagcgctcaatgatgccaagcagcattttagcgaacacatgggatcc
ctggataacttcaacctccccgtcacccgccgacaggcgctggtggatttaaaccacttc
cttgaccatgggttggccgactttgggcgctaccaagatgcgattagcgataaagaaccg
ttcctttttcactccagactatcggcggcgctcaatatcggcctgcttacacctcatgaa
gtctgtgaagccgctgagcagcgctacctaacaggtcatgcgcctatcaatgcagtcgaa
ggattcattcgtcaaatactgggttggcgagagtatgttcgagggctttattggacacaa
atgccgacttacaagcgagagaatcgacttggctttgagcgagaattaccagcattttac
tgggatggcaataccgatatgcgctgtttacagcgcgccattcaaatgaccatcgataac
agctacgcccaccatattcagcgtttgatggtaaccggcaactttgccctactgtgcggt
gttaagcctgaagcactctgtgactggtatctagcggtgtatgccgatgcctgcgaatgg
gtagagctgcccaacaccttaggcatggtactgcacgctgacggcggcttaatgggctcc
aaaccttactgcgcttcaggtaaatatatcgacaaaatgtctgaccactgccagcactgc
cgctactctccaaaacaggtaacaggcccaaaggcgtgtccgtttaacagcctttactgg
cattttctggaaaccaacgctgaacagctgaaccgcaatccgcgcatgaagttgatctat
ggctcactctctcgcatgaaagacgaaaagcgtgacgcgatgcgtcagcaggctgaacag
tttcttgcttcactacccaccagtccaggctacggccagacctcccacacacaaggctat
ctatcaaagggcactcaatga
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