Halomonas campaniensis: FF32_00480
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Entry
FF32_00480 CDS
T03198
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
hcs
Halomonas campaniensis
Pathway
hcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FF32_00480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcs03400
]
FF32_00480
Enzymes [BR:
hcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FF32_00480
DNA repair and recombination proteins [BR:
hcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FF32_00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AIA73364
LinkDB
All DBs
Position
107902..111528
Genome browser
AA seq
1208 aa
AA seq
DB search
MSANSHCSPTPFSPTSLTPGFMVVHANRLEDLRGLAVQWMRLHPLGPLENETILVQSNGI
GQWLKLALAEDPENGGAGIAAALDVMLPARFLWQAYRTVLTHVDQDGDAVPETSPFDKSR
LVWRLLRLLPTLAGQEVFAPLAQFLEVDRDQRKHYQLAERLADLFDQYQVYRADWLDAWA
NGNDVLITARGEPRPLEEHQRWQPALWRILREDVAATQGDAGLNSSRAQVHRRFLKATEQ
LEGQPCPRGLPRRLIIFGISSLPQQTLEALAALSRCCQIVLCVHNPCQFYWADIIEHKDL
LRANRYRQRRKTGMPEALDVLGTGDADDALHLHAQPLLAAWGKQGRDYLRLLDEHDDSGN
YQTLFEQQALRIDMFEPFNGVDRDCLLSQLQDDIRELRPVAETQTHWPALNAADDSIVFH
IAHGPQREVEILHDQLLAAFSADPNLRPRDIIVMVPDIDRYAPHIAAVFGQLQNDDPRHI
PYTLSDQASRHRLPLMIALEKLLRLPELRLSVSDLLDLLDVPALRQRFGLEERDLPVLER
WMEGAGIRWGLNAKQRQTLELPGGLSQNTWAFGLRRLLLGYTVGEGHAWQGIEPFDDIGG
LEAGLAGPLATLLEKLEETWETFCQPTDAANWVARLRTLLETFFLTDDAQESVMLTKLEN
GLQQMLESSEEAQLNEPLPLSMVREHWLAQIDEHSLSQRFLAGAVNFATLMPMRAIPFKR
VCLLGMNDGEYPRSQPPLDFDLMGSDYRPGDRSRREDDRYLFLEALLSARDQLYISWVGR
SQIDNTPLPPSVLVGQLRDHLETGWQIENGTPLLEALTTEHPLQPFSRAYFDANTQVTRL
FTYAHEWREVHAPRTPQAAQSTLPPPENIPTSLTLGQLGQFLREPVRAFFNTRLGVYFEQ
EAIAELDEEPFALDGLQNWQLQDQLIAAQRHAIDRGEPRIEALHTALERFQGQGVLAMGA
FGERMRDALAEPMEALFSDYEEALGAWPIALGDPAAIHLAGSNGITLEDWLGELRQDDAG
NRCRLLLLSSSLIKNSKYQWHLLLRHWVAHLAGNLSGPMTTQLLSKAGNITLEPIAADIA
HAHLETQLSAWQHGLEVPLPLAPQAAFAWLTKLGTPDLAIEKGRESDAYAAAEKVYESGF
KTTGEADQSPYLGHQWPRFERLFFDRTANEKHTFAELTEALYAPLFYAVKGNAKKDNGNK
DNAKKAAS
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaattcacactgctcaccaacaccgttctcgccaacgtcgcttacccctggc
tttatggtggtgcacgctaaccgcctggaagacttgcgcgggctggcggtgcagtggatg
cgcttgcacccgttggggccgttggaaaacgagaccattctggtgcagagcaacggcatt
gggcagtggctaaagctggcgctggcggaagacccggaaaacggcggtgcgggcatcgcc
gccgcgctggatgtcatgctgcctgctcggtttctatggcaggcctaccgcacggtgctc
acccacgttgatcaagatggcgacgcggtgcctgaaacctcgccgtttgataaatcgcgc
ttggtgtggcggctgctgcgcctgctgcccacactagcggggcaggaagtgttcgcgccg
ctggcacagttcttggaagtcgaccgcgaccagcgcaagcactaccaactggccgagcgg
ctggcggatttgttcgaccagtatcaggtctaccgcgccgactggctggatgcctgggcc
aacggtaacgacgtactgattaccgctcggggcgagccccgcccgctggaagagcaccag
cgctggcaacctgcgctgtggcgcattctgcgcgaagatgtcgccgccacccaaggcgat
gcaggccttaacagtagccgtgcccaggtgcatcggcgctttttgaaagcgacagaacag
ctggaaggccagccctgcccgcgcggcttgcctcggcggctgattatttttggtatttca
tcgctgccccaacaaaccttggaagcgctggcggcgctctctcgctgctgccaaatcgtg
ctgtgtgtgcacaacccctgccagttctactgggcagatatcatcgagcacaaagattta
ctgcgcgccaaccgctaccgccagcggcgcaaaaccggcatgcccgaagcgttggatgta
ctgggcactggcgacgccgacgatgccctgcatctgcacgctcaaccgctactcgccgct
tggggcaagcagggccgcgactacctgcgcctgctggatgaacacgacgattcgggcaat
tatcaaactttgtttgagcagcaggcgctgcgcattgatatgttcgagccgtttaacggc
gttgatcgcgactgcctgctcagccaactgcaagatgatattcgcgaactgcgccccgta
gcggaaacccaaactcactggccagcgctaaacgcggcagatgactccattgtgtttcat
attgcccatggcccccagcgggaagttgagattcttcacgaccagctgctggccgccttc
agtgccgaccccaacctgcgcccgcgggatatcatcgtcatggtgccagatatcgaccgc
tacgcgccgcatatcgccgcggtgtttggccagctacaaaatgacgacccgcggcatata
ccctatacgctttccgaccaagccagccgccaccgcctgccactaatgattgccctggaa
aagctgctgcgcctgccagagctgcgtctttcggtcagcgacttactggatctgctcgat
gtgcccgctctgcgccagcgctttgggctggaagagcgtgacctgccggtactagagcgc
tggatggaaggcgcaggtatccgctgggggctaaatgccaagcagcgccagactctcgaa
cttcccggcgggctaagccaaaatacctgggcgtttggtctgcgccgcttgctgctgggc
tacaccgtgggcgaaggccacgcatggcaaggtatcgagccgtttgacgacatcggcggg
ctggaagcgggccttgccgggccgttagccaccttgttggaaaagctcgaagagacctgg
gaaaccttctgccagcccaccgatgccgctaactgggtagcgcggctacgcacgctgctg
gaaaccttctttcttaccgacgacgcccaagaaagcgtgatgctcaccaagctggaaaac
ggcttgcagcaaatgctggaaagcagcgaggaagcccagttaaacgaaccgctgccgctc
tccatggtgcgcgaacactggctggcacagattgatgaacatagtctttcccagcgtttt
ctagcaggtgccgttaacttcgccacgctaatgcccatgcgcgccattccgtttaagcgc
gtgtgcctgctgggcatgaacgacggagagtacccccgctctcagccaccgctagatttt
gatttgatgggcagtgactaccgccccggtgaccgttcccgccgggaagacgaccgctac
ctgtttttggaagcgctgctctctgcccgcgaccagctctacataagctgggtaggcaga
agccaaatcgacaacaccccgctaccgccttcggtactggtcggccaactgcgtgaccat
ctggaaacaggctggcagatcgagaacggcacgccgctgctggaagcgctaaccaccgag
catccgctgcagccgtttagccgcgcttattttgatgccaacacgcaagtcactcgactg
tttacctatgcacatgaatggcgcgaggtacacgcaccacgcacgcctcaagctgcccaa
tccacacttcccccaccggaaaacatcccaaccagcctgacgcttggccagttaggccaa
ttcctacgcgagccagtacgcgccttcttcaatacccggttgggggtgtatttcgagcag
gaagcgattgccgagctagacgaagaaccgttcgccctggatggcctgcaaaactggcag
ctacaagaccaactgatcgccgctcagcgccacgccattgatcgcggcgagccacgcatt
gaagcactgcacacagcccttgagcgttttcagggccaaggcgtattggccatgggtgcc
tttggcgagcgcatgcgcgatgccttagcagaacccatggaagccctgttcagcgactac
gaagaagccctgggcgcttggccgattgcgctaggtgacccagcagccattcacctggca
ggcagtaacggtattacgttggaagattggctgggcgagctacgccaggatgacgcgggc
aaccgctgccgcctgttattactcagcagcagcctgatcaagaacagcaagtatcagtgg
catctgctgctacgccactgggttgcccacctagcgggtaacctcagcggtccgatgacc
acccagctgctttccaaggccggcaacatcaccctggaacctatcgctgccgacatcgcc
cacgcccacctggaaacccaactaagcgcctggcaacacggcctggaagtaccgcttccg
ctagccccccaggccgcctttgcttggctaacaaaactgggcacacctgaccttgctatt
gaaaaaggcagggaaagcgacgcctacgccgcggccgaaaaagtctatgaaagcggattt
aaaactactggcgaagccgaccaaagcccctatctcggccaccaatggccccgcttcgag
cggctgtttttcgaccgcaccgccaacgaaaagcacacctttgccgaactcacggaagcg
ctgtacgccccgctgttttacgccgtgaaaggtaatgcgaagaaagataatgggaacaaa
gataacgcgaagaaagcggcatcgtaa
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