Halomonas campaniensis: FF32_00505
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Entry
FF32_00505 CDS
T03198
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
hcs
Halomonas campaniensis
Pathway
hcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FF32_00505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcs03400
]
FF32_00505
Enzymes [BR:
hcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FF32_00505
DNA repair and recombination proteins [BR:
hcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FF32_00505
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
AAA_11
UvrD_C_2
Viral_helicase1
SH3_13
AAA_22
NAT10_TcmA_helicase
UvrD-helicase
nSTAND3
AAA_28
SLFN-g3_helicase
NTPase_1
TraI_hel_assoc_N
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AIA73369
LinkDB
All DBs
Position
118053..120443
Genome browser
AA seq
796 aa
AA seq
DB search
MSKPKDTHTFDLFGDAVETQDTQPTTASTPVSAHPALSDTAELLTLCERWVARGWLRDLD
RALVRFLAAEAADAPALLLLAAALASHQLGRGHVCLDLNATLNAPDFALSLPPEGDDLTD
PPPLPSDVLATLTLSEWQAALHHPLLTSEGPGNTPLVVVTTHSGAGDKSHTRLYLRRYWQ
YEQTLHQQIASRLEDENTTHTQAVNDNATTATDNRCRRPIYWAMGDDSHPGLLPQALNIL
FKPSGNLDWQKTACALAARSRFGIITGGPGTGKTTTVVRLLALLQTLQLAHSPSQPLRIR
LAAPTGKAAARLNESIAGQVSQLPFKGLTTLLEGSLLEGSLWEEALWEGALARDDKATEQ
LKAAIPTEVTTLHRLLGARPDTRHFRHSAANPLALDVLVIDEASMVDIEMMAAVLSALPA
NAQCVLLGDKDQLASVEAGSVLGDLCRRAEAAHYTPETAQWLESATGQPLPPEYLDAEGQ
PLDQAITMLRVSHRFNEHSGIGQLAQAINQPSHAQTDREKQQAVNAVLRHGYPDLHYLTL
AEDTALDKLVIHGSADKFLNGGEGRTNHKHETIAAPTGYRHYLKVLNAQRPRGESFEDNP
AAYNAWASDVLSAYSHFQLLCALRKGPWGVEGLNLHIAKTLRSEKLLFGSDYTLEKGWYE
GRPVLVTQNDYGLKLMNGDIGITLAVPDPRNPQQKLLRVAFPSSSTTSDADSPIRWVLPS
RLHAVETVFAMTVHKSQGSEFLHTALLLPPTINPILTRELVYTGITRARDWLTLVEAKRG
VLNEAVTREVMRVSGM
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcccaaagacacccacaccttcgacctgtttggcgatgccgttgaaacacag
gatacccagcccaccacggcttccacgccagtgagcgctcaccctgcgttaagcgatacc
gctgaattgctaaccctatgcgagcgctgggtagccaggggctggctacgcgatttagac
cgcgccctggtgcgctttctagcagcagaagcagcggatgcccccgcactgctactgtta
gccgccgccctggccagccatcagctaggccgaggccatgtgtgcctggatttaaacgcc
acgcttaacgcaccggatttcgccctctcgctaccgcccgaaggggatgacttaaccgac
ccgccaccgctgcccagcgatgtgctagcaacgctcacgctaagcgaatggcaagccgcg
ctgcatcacccactgctcaccagcgaaggccctggcaatacaccgctggtggtagtaacg
actcactcaggcgccggtgataagagccacacgcggctctacctacgccgctactggcag
tatgagcaaaccctacaccagcaaatcgccagccgcttagaagatgaaaacaccacacac
acacaggcggtgaatgataacgccacgacggcaactgataaccgttgtaggaggcctatt
tattgggcgatgggtgacgatagtcaccctggccttctcccccaggccctgaacattctg
ttcaagccaagcggcaacctcgactggcaaaaaaccgcctgcgccctggccgcccgcagc
cgcttcggcattattaccggcggccccggcaccggcaaaaccaccaccgtggtgcgcctg
ctcgccctgctgcaaacgctgcagttggcccactcacccagccaaccgctgcgcattcgc
ctagccgcccccaccggcaaagccgccgcccgcctgaatgaatccatcgccgggcaagtc
agccaactccccttcaaaggattaaccaccttgttggaaggatctttgttggaaggatct
ttatgggaggaggctttgtgggagggagctttagctcgcgatgataaagccacagaacag
ctaaaagccgccatcccaactgaagtcaccacactccaccgcttactaggtgcccgcccc
gacacccgccacttccgccatagcgccgccaacccgctggcgctggacgtactggtgatc
gacgaagcctccatggtggatatcgaaatgatggccgccgtgctgagtgccctgcccgcc
aatgcccagtgcgtgctgctgggggataaagaccagttggcatcggtagaagctggctcg
gtactcggcgatttatgccgccgtgccgaggccgcccactacaccccagaaaccgcccaa
tggctggaaagcgccaccggccagccgctgccgccagagtacctggatgctgaaggtcag
ccgctcgaccaagccattaccatgctgcgggtaagccaccgctttaacgaacacagcggc
atcggccagttggcccaggcgattaaccagcccagccatgcccaaactgaccgggaaaaa
cagcaggcagttaacgcagtgctgcgccatggctacccagacctgcactacctaacgctt
gcagaggacaccgcgctggataagctggtgattcacggcagcgcggataagtttctcaat
ggcggagaaggccgcaccaaccacaaacatgaaaccatcgccgcgcccactggctatcgc
cattacctaaaggtgctgaacgcacagcgcccgcgtggggaatcgtttgaggacaaccca
gcggcctataacgcctgggcaagcgatgtgctaagtgcctacagccacttccaactgcta
tgcgcgctgcgcaaaggcccctggggggtagaaggcttaaacctgcatatcgccaaaact
ctacgcagcgaaaagctgctgtttggcagtgattacacgttagagaaaggctggtatgaa
ggccgtccggtgctggtcacccaaaacgactatggcctaaaactaatgaacggcgatatc
ggcatcaccctggcggtgccggatccgcgcaacccgcaacagaaactgttgagagtggcc
tttccttcatcaagtaccacgagcgatgccgatagccccatccgctgggtgctgccctct
cgcctgcacgcggtagaaaccgtattcgcgatgacggtacacaaatcccaaggctcagag
ttcttacacaccgccctgctgctaccgcccaccatcaacccaattctcacccgcgagctg
gtctacaccggcatcacccgcgcccgcgactggctcacgctagtggaagccaaacgcggg
gtgttgaatgaggctgttactagagaagttatgagggttagtgggatgtag
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